Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001867g0090 Nicotiana tabacum HOM05D005610 ORTHO05D006181 4.1e-78 294.7 148 100.0
Nitab4.5_0001701g0220 Nicotiana tabacum HOM05D005610 ORTHO05D006181 2.6e-61 238.8 123 96.7
Nitab4.5_0008006g0060 Nicotiana tabacum HOM05D005610 ORTHO05D006181 7.7e-61 237.3 124 94.4
Nitab4.5_0018980g0020 Nicotiana tabacum HOM05D005610 ORTHO05D006181 1.3e-60 236.5 122 95.9
Sopen04g006810 Solanum pennellii HOM05D005610 ORTHO05D006181 6.5e-60 234.2 123 95.1
Peaxi162Scf00442g00523 Petunia axillaris HOM05D005610 ORTHO05D006181 8.5e-60 233.8 123 95.1
Solyc04g014700.4 Solanum lycopersicum HOM05D005610 ORTHO05D006181 1.5e-59 233.0 123 94.3
PGSC0003DMG400023560 Solanum tuberosum HOM05D005610 ORTHO05D006181 1.9e-59 232.6 123 94.3
CAN.G1263.12 Capsicum annuum HOM05D005610 ORTHO05D006181 4.2e-59 231.5 123 94.3
Cc00_g15270 Coffea canephora HOM05D005610 ORTHO05D006181 5.9e-53 211.1 114 89.5
Oeu054255.1 Olea europaea HOM05D005610 ORTHO05D006181 6.5e-52 207.6 115 87.8
Dinv13959 Davidia involucrata HOM05D005610 ORTHO05D006181 1.5e-51 206.5 115 86.1
Cc09_g00980 Coffea canephora HOM05D005610 ORTHO05D006181 7.2e-51 204.1 115 85.2
Oeu052223.1 Olea europaea HOM05D005610 ORTHO05D006181 2.1e-50 202.6 115 85.2
QL10p003579 Quercus lobata HOM05D005610 ORTHO05D006181 3.6e-50 201.8 114 86.8
SalBow8G2682 Salvia bowleyana HOM05D005610 ORTHO05D006181 4.7e-50 201.4 114 85.1
SGA_v2.0_scaffold7G03768 Striga asiatica HOM05D005610 ORTHO05D006181 1.4e-49 199.9 111 86.5
Prupe.8G115200 Prunus persica HOM05D005610 ORTHO05D006181 2.3e-49 199.1 116 81.9
PGR142G4331 Punica granatum HOM05D005610 ORTHO05D006181 2.3e-49 199.1 115 82.6
SGA_v2.0_scaffold4G01884 Striga asiatica HOM05D005610 ORTHO05D006181 3.0e-49 198.7 111 85.6
Migut.H01600 Erythranthe guttata HOM05D005610 ORTHO05D006181 4.0e-49 198.4 111 84.7
Cpa.g.sc152.66 Carica papaya HOM05D005610 ORTHO05D006181 6.8e-49 197.6 114 81.6
Duzib235G0930 Durio zibethinus HOM05D005610 ORTHO05D006181 8.8e-49 197.2 113 84.1
Gohir.A06G152700 Gossypium hirsutum HOM05D005610 ORTHO05D006181 1.2e-48 196.8 113 83.2
MD10G1088300 Malus domestica HOM05D005610 ORTHO05D006181 1.2e-48 196.8 114 83.3
Haze_06904 Corylus avellana HOM05D005610 ORTHO05D006181 1.5e-48 196.4 122 77.9
Prupe.8G114900 Prunus persica HOM05D005610 ORTHO05D006181 2.0e-48 196.1 116 81.0
Atru.chr1.2482 Acer truncatum HOM05D005610 ORTHO05D006181 2.6e-48 195.7 112 83.0
Thecc.06G231600 Theobroma cacao HOM05D005610 ORTHO05D006181 2.6e-48 195.7 111 84.7
Actinidia26870 Actinidia chinensis HOM05D005610 ORTHO05D006181 3.4e-48 195.3 115 81.7
TWI38G1154 Tripterygium wilfordii HOM05D005610 ORTHO05D006181 3.4e-48 195.3 117 81.2
COL.COLO4_31865 Corchorus olitorius HOM05D005610 ORTHO05D006181 4.4e-48 194.9 111 84.7
PSO210G2880 Papaver somniferum HOM05D005610 ORTHO05D006181 5.7e-48 194.5 120 76.7
Ciclev10017234m.g Citrus clementina HOM05D005610 ORTHO05D006181 7.5e-48 194.1 109 86.2
GSVIVG01008189001 Vitis vinifera HOM05D005610 ORTHO05D006181 7.5e-48 194.1 114 81.6
RcHm_v2.0_Chr6g0259461 Rosa chinensis HOM05D005610 ORTHO05D006181 9.8e-48 193.7 119 79.0
Gorai.010G185800 Gossypium raimondii HOM05D005610 ORTHO05D006181 1.3e-47 193.4 113 82.3
Thecc.10G134700 Theobroma cacao HOM05D005610 ORTHO05D006181 1.7e-47 193.0 111 82.0
ECA238G1057 Erigeron canadensis HOM05D005610 ORTHO05D006181 2.2e-47 192.6 112 82.1
CANSAT01G2220 Cannabis sativa HOM05D005610 ORTHO05D006181 2.8e-47 192.2 116 76.7
Ca_13393_v3 Cicer arietinum L. HOM05D005610 ORTHO05D006181 2.8e-47 192.2 114 80.7
MSTRG.13119 Avicennia marina HOM05D005610 ORTHO05D006181 4.8e-47 191.4 115 80.9
CiPaw.10G076800 Carya illinoinensis HOM05D005610 ORTHO05D006181 4.8e-47 191.4 114 80.7
Thecc.10G135500 Theobroma cacao HOM05D005610 ORTHO05D006181 4.8e-47 191.4 111 81.1
TAR624G0514 Trochodendron aralioides HOM05D005610 ORTHO05D006181 6.3e-47 191.0 114 81.6
ClCG07G002910 Citrullus lanatus HOM05D005610 ORTHO05D006181 1.1e-46 190.3 120 75.0
Duzib160G0112 Durio zibethinus HOM05D005610 ORTHO05D006181 1.1e-46 190.3 113 79.6
FAN15G0825 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.1e-46 190.3 114 79.8
vmacro03652 Vaccinium macrocarpon HOM05D005610 ORTHO05D006181 1.4e-46 189.9 117 76.9
EL10Ac4g08756 Beta vulgaris HOM05D005610 ORTHO05D006181 1.8e-46 189.5 113 83.2
CSS0047184 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 1.8e-46 189.5 115 79.1
Aa31LG5G10530 Aethionema arabicum HOM05D005610 ORTHO05D006181 2.4e-46 189.1 111 78.4
arahy.Tifrunner.gnm1.ann1.PD4MQY Arachis hypogaea HOM05D005610 ORTHO05D006181 2.4e-46 189.1 141 67.4
Medtr1g023330 Medicago truncatula HOM05D005610 ORTHO05D006181 2.4e-46 189.1 115 77.4
FvH4_2g07070 Fragaria vesca HOM05D005610 ORTHO05D006181 3.1e-46 188.7 115 78.3
Medtr8g106470 Medicago truncatula HOM05D005610 ORTHO05D006181 3.1e-46 188.7 115 79.1
MELO3C008876.2 Cucumis melo HOM05D005610 ORTHO05D006181 4.1e-46 188.3 117 76.1
Glyma.19G169600 Glycine max HOM05D005610 ORTHO05D006181 5.4e-46 188.0 114 77.2
ClCG01G011300 Citrullus lanatus HOM05D005610 ORTHO05D006181 7.0e-46 187.6 117 76.1
Sed0027170 Sechium edule HOM05D005610 ORTHO05D006181 7.0e-46 187.6 117 74.4
arahy.Tifrunner.gnm1.ann1.IYUI89 Arachis hypogaea HOM05D003989 ORTHO05D004626 9.1e-46 187.2 137 67.9
Lj5g0020791 Lotus japonicus HOM05D005610 ORTHO05D006181 9.1e-46 187.2 115 76.5
HanXRQChr05g0129341 Helianthus annuus HOM05D005610 ORTHO05D006181 1.2e-45 186.8 114 76.3
Lj4g0017663 Lotus japonicus HOM05D005610 ORTHO05D006181 1.2e-45 186.8 114 77.2
Phvul.004G117800 Phaseolus vulgaris HOM05D005610 ORTHO05D006181 1.6e-45 186.4 114 76.3
BcaC09g47662 Brassica carinata HOM05D005610 ORTHO05D006181 2.0e-45 186.0 111 75.7
CsaV3_4G031690 Cucumis sativus L. HOM05D005610 ORTHO05D006181 2.0e-45 186.0 117 74.4
Eucgr.B02596 Eucalyptus grandis HOM05D005610 ORTHO05D006181 2.7e-45 185.7 115 76.5
BNapus_Darmor_BZH_scaffold_133p00040 Brassica napus HOM05D005610 ORTHO05D006181 3.5e-45 185.3 111 75.7
BraA01t04664Z Brassica rapa HOM05D005610 ORTHO05D006181 3.5e-45 185.3 111 75.7
Thhalv10022365m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 3.5e-45 185.3 115 73.0
PSO302G0046 Papaver somniferum HOM05D005610 ORTHO05D006181 3.5e-45 185.3 117 74.4
Aqoxy4G02780 Aquilegia oxysepala HOM05D005610 ORTHO05D006181 4.5e-45 184.9 111 81.1
Sp3g00630 Schrenkiella parvula HOM05D005610 ORTHO05D006181 4.5e-45 184.9 111 74.8
Carub.0003s0067 Capsella rubella HOM05D005610 ORTHO05D006181 5.9e-45 184.5 111 75.7
CARHR075530 Cardamine hirsuta HOM05D005610 ORTHO05D006181 5.9e-45 184.5 111 76.6
Glyma.03G168300 Glycine max HOM05D005610 ORTHO05D006181 5.9e-45 184.5 114 74.6
THA.LOC104822382 Tarenaya hassleriana HOM05D005610 ORTHO05D006181 7.7e-45 184.1 116 75.0
Lalb_Chr04g0257231 Lupinus albus HOM05D005610 ORTHO05D006181 1.0e-44 183.7 113 77.0
CDE04G2721 Ceratophyllum demersum HOM05D005610 ORTHO05D006181 1.3e-44 183.3 114 74.6
AUR62034142 Chenopodium quinoa HOM05D005610 ORTHO05D006181 1.3e-44 183.3 113 78.8
AL3G10740 Arabidopsis lyrata HOM05D005610 ORTHO05D006181 1.7e-44 183.0 111 75.7
AT3G01435 Arabidopsis thaliana HOM05D005610 ORTHO05D006181 1.7e-44 183.0 111 74.8
AUR62014294 Chenopodium quinoa HOM05D005610 ORTHO05D006181 1.7e-44 183.0 116 76.7
Nn8g38603 Nelumbo nucifera HOM05D005610 ORTHO05D006181 8.6e-44 180.6 141 67.4
Hund25163 Selenicereus undatus HOM05D005610 ORTHO05D006181 1.5e-43 179.9 115 76.5
VMungo0464G1641 Vigna mungo HOM05D005610 ORTHO05D006181 5.5e-43 177.9 138 64.5
Lj6g0026774 Lotus japonicus HOM05D005610 ORTHO05D006181 1.2e-42 176.8 112 71.4
Manes.16G001300 Manihot esculenta HOM05D005610 ORTHO05D006181 2.8e-42 175.6 112 75.0
Sabra04G0000600 Salix brachista HOM05D005610 ORTHO05D006181 3.6e-42 175.3 115 73.9
unitig_748.g7924 Utricularia gibba HOM05D000772 ORTHO05D006181 4.7e-42 174.9 109 76.1
A05p44570 Brassica napus HOM05D005610 ORTHO05D006181 6.1e-42 174.5 111 72.1
BraA05t23199Z Brassica rapa HOM05D005610 ORTHO05D006181 6.1e-42 174.5 111 72.1
Potri.004G001600 Populus trichocarpa HOM05D005610 ORTHO05D006181 8.0e-42 174.1 115 73.9
Thhalv10022907m.g Eutrema salsugineum HOM05D005610 ORTHO05D006181 1.0e-41 173.7 126 66.7
BolC1t05956H Brassica oleracea HOM05D005610 ORTHO05D006181 3.0e-41 172.2 132 62.9
BolC5t35148H Brassica oleracea HOM05D005610 ORTHO05D006181 6.8e-41 171.0 111 71.2
C09p75160 Brassica napus HOM05D005610 ORTHO05D006181 7.5e-40 167.5 111 70.3
Lsat_1_v5_gn_7_13401 Lactuca sativa HOM05D005610 ORTHO05D006181 3.1e-38 162.2 101 73.3
Ah.06g187910 Amaranthus hybridus HOM05D005610 ORTHO05D006181 5.4e-38 161.4 100 77.0
ATR1153G018 Amborella trichopoda HOM05D005610 ORTHO05D006181 7.8e-37 157.5 108 69.4
Zm00001eb234830 Zea mays HOM05D005610 ORTHO05D006181 2.3e-36 156.0 109 68.8
HPP92_003728 Vanilla planifolia HOM05D005610 ORTHO05D006181 1.1e-35 153.7 108 64.8
ATR0723G088 Amborella trichopoda HOM05D005610 ORTHO05D006181 7.3e-35 151.0 108 67.6
SEGI_23772 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 8.0e-34 147.5 108 68.5
Zm00001eb206370 Zea mays HOM05D005610 ORTHO05D006181 1.4e-33 146.7 115 63.5
Gohir.D06G159100 Gossypium hirsutum HOM05D005610 ORTHO05D006181 3.0e-33 145.6 83 79.5
Os02g0189100 Oryza sativa ssp. japonica HOM05D005610 ORTHO05D006181 8.9e-33 144.1 106 64.2
MBI19_g29445_MAGBIO Magnolia biondii HOM05D005610 ORTHO05D006181 2.0e-32 142.9 132 57.6
Dinv29757 Davidia involucrata HOM05D005610 ORTHO05D006181 3.4e-32 142.1 74 93.2
Psat6g005240 Pisum sativum HOM05D005610 ORTHO05D006181 5.8e-32 141.4 109 69.7
FAN24G2055 Fragaria x ananassa HOM05D005610 ORTHO05D006181 3.7e-31 138.7 84 75.0
CSS0025052 Camellia sinensis var. sinensis HOM05D005610 ORTHO05D006181 6.4e-31 137.9 85 72.9
TAR626G0207 Trochodendron aralioides HOM05D005610 ORTHO05D006181 3.5e-29 132.1 179 44.7
HanXRQChr15g0470051 Helianthus annuus HOM05D005610 ORTHO05D006181 1.7e-28 129.8 88 72.7
Pp3c10_18150 Physcomitrium patens HOM05D005610 ORTHO05D006181 2.3e-28 129.4 107 57.0
Thecc.10G135300 Theobroma cacao HOM05D005610 ORTHO05D006181 1.5e-27 126.7 70 87.1
Actinidia02323 Actinidia chinensis HOM05D005610 ORTHO05D006181 5.6e-27 124.8 67 83.6
BNapus_Darmor_BZH_scaffold_119p00050 Brassica napus HOM05D005610 ORTHO05D006181 7.3e-27 124.4 75 77.3
BNapus_Darmor_BZH_scaffold_97p00380 Brassica napus HOM05D005610 ORTHO05D006181 7.3e-27 124.4 75 77.3
SMO200G0153 Selaginella moellendorffii HOM05D005610 ORTHO05D006181 9.5e-27 124.0 115 47.8
Mapoly0014s0199 Marchantia polymorpha HOM05D005610 ORTHO05D006181 1.2e-26 123.6 106 52.8
Eucgr.K02585 Eucalyptus grandis HOM05D005610 ORTHO05D006181 2.0e-24 116.3 70 80.0
FAN27G3428 Fragaria x ananassa HOM05D005610 ORTHO05D006181 7.0e-22 107.8 74 68.9
Zm00001eb004040 Zea mays HOM05D005610 ORTHO05D006181 7.0e-22 107.8 72 65.3
CBR_g27782 Chara braunii HOM05D005610 ORTHO05D001468 1.0e-20 104.0 112 47.3
Rhsim13G0147700 Rhododendron simsii HOM05D005610 ORTHO05D006181 1.3e-20 103.6 61 82.0
AagrBONN_evm.TU.Sc2ySwM_228.3334 Anthoceros agrestis HOM05D005610 ORTHO05D006181 1.9e-19 99.8 135 38.5
Pp3c3_34050 Physcomitrium patens HOM05D005610 ORTHO05D006181 9.5e-19 97.4 78 59.0
TPR.G7342 Trifolium pratense HOM05D005610 ORTHO05D006181 1.2e-18 97.1 56 76.8
FAN20G1916 Fragaria x ananassa HOM05D005610 ORTHO05D006181 1.4e-17 93.6 57 73.7
Sc16g0007910 Simmondsia chinensis HOM05D005610 ORTHO05D006181 2.3e-17 92.8 54 83.3
RcHm_v2.0_Chr7g0240721 Rosa chinensis HOM05D005610 ORTHO05D006181 4.1e-14 82.0 50 80.0
RcHm_v2.0_Chr7g0240711 Rosa chinensis HOM05D005610 ORTHO05D006181 1.1e-11 73.9 52 67.3
SEGI_27415 Sequoiadendron giganteum HOM05D005610 ORTHO05D006181 6.2e-10 68.2 60 56.7
Migut.M01383 Erythranthe guttata HOM05D005610 ORTHO05D006181 1.8e-09 66.6 58 56.9
CARHR125830 Cardamine hirsuta HOM05D005610 ORTHO05D006181 1.3e-07 60.5 38 65.8


User provided reference genes

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