Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001860g0130 Nicotiana tabacum HOM05D005844 ORTHO05D007203 1.6e-166 589.3 296 100.0
Nitab4.5_0003318g0030 Nicotiana tabacum HOM05D005844 ORTHO05D007203 1.7e-147 526.2 278 95.0
Sopen02g037980 Solanum pennellii HOM05D005844 ORTHO05D007203 1.4e-130 469.9 273 86.1
PGSC0003DMG400012605 Solanum tuberosum HOM05D005844 ORTHO05D007203 2.3e-128 462.6 273 85.7
Solyc02g093390.4 Solanum lycopersicum HOM05D005844 ORTHO05D007203 2.3e-120 436.0 231 91.3
Dinv09631 Davidia involucrata HOM05D005844 ORTHO05D007203 3.3e-103 379.0 244 75.0
Ciclev10016139m.g Citrus clementina HOM05D005844 ORTHO05D007203 7.3e-103 377.9 257 73.2
Dinv33434 Davidia involucrata HOM05D005844 ORTHO05D007203 7.3e-103 377.9 244 75.0
Actinidia36121 Actinidia chinensis HOM05D005844 ORTHO05D007203 5.2e-101 371.7 239 74.9
CiPaw.03G045000 Carya illinoinensis HOM05D005844 ORTHO05D007203 4.4e-100 368.6 223 79.4
GSVIVG01032391001 Vitis vinifera HOM05D005844 ORTHO05D007203 4.4e-100 368.6 214 79.9
Cfa007347 Carpinus fangiana HOM05D005844 ORTHO05D007203 7.6e-100 367.9 223 79.8
Actinidia05987 Actinidia chinensis HOM05D005844 ORTHO05D007203 9.9e-100 367.5 276 69.2
RcHm_v2.0_Chr2g0173161 Rosa chinensis HOM05D005844 ORTHO05D007203 9.9e-100 367.5 236 73.7
Cc07_g01570 Coffea canephora HOM05D005844 ORTHO05D007203 3.8e-99 365.5 241 75.1
Hma1.2p1_2550F.1_g324230 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 3.8e-99 365.5 278 68.3
Nn4g22606 Nelumbo nucifera HOM05D005844 ORTHO05D007203 4.9e-99 365.2 222 79.3
SalBow7G1242 Salvia bowleyana HOM05D005844 ORTHO05D007203 8.4e-99 364.4 227 78.4
CSS0012729 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 2.4e-98 362.8 278 69.1
Aqoxy5G03753 Aquilegia oxysepala HOM05D005844 ORTHO05D007203 3.2e-98 362.5 274 65.3
HanXRQChr02g0043121 Helianthus annuus HOM05D005844 ORTHO05D007203 1.2e-97 360.5 238 73.5
Gohir.D04G058000 Gossypium hirsutum HOM05D005844 ORTHO05D007203 3.5e-97 359.0 278 65.8
ECA247G4055 Erigeron canadensis HOM05D005844 ORTHO05D007203 4.6e-97 358.6 269 67.3
Gohir.A05G355200 Gossypium hirsutum HOM05D005844 ORTHO05D007203 4.6e-97 358.6 278 65.5
MSTRG.3288 Avicennia marina HOM05D005844 ORTHO05D007203 6.0e-97 358.2 274 67.9
COL.COLO4_29165 Corchorus olitorius HOM05D005844 ORTHO05D007203 7.8e-97 357.8 214 78.0
TWI56G0011 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 1.0e-96 357.5 276 64.5
Dinv07356 Davidia involucrata HOM05D005844 ORTHO05D007203 1.3e-96 357.1 242 71.9
Rhsim10G0015300 Rhododendron simsii HOM05D005844 ORTHO05D007203 3.9e-96 355.5 234 73.5
Rhsim10G0016000 Rhododendron simsii HOM05D005844 ORTHO05D007203 3.9e-96 355.5 234 73.5
Gorai.012G064700 Gossypium raimondii HOM05D005844 ORTHO05D007203 5.1e-96 355.1 273 65.9
PGR142G0612 Punica granatum HOM05D005844 ORTHO05D007203 6.6e-96 354.8 234 73.9
Duzib187G1685 Durio zibethinus HOM05D005844 ORTHO05D007203 8.6e-96 354.4 287 63.8
Migut.K01404 Erythranthe guttata HOM05D005844 ORTHO05D007203 8.6e-96 354.4 273 66.3
Potri.001G344000 Populus trichocarpa HOM05D005844 ORTHO05D007203 8.6e-96 354.4 237 73.0
QL02p074142 Quercus lobata HOM05D005844 ORTHO05D007203 1.1e-95 354.0 264 65.9
Sc16g0003190 Simmondsia chinensis HOM05D005844 ORTHO05D007203 1.1e-95 354.0 214 79.0
FAN05G4937 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.5e-95 353.6 284 64.1
THA.LOC104823955 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 1.5e-95 353.6 280 65.0
TWI36G0829 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 1.5e-95 353.6 230 73.5
CsaV3_5G027090 Cucumis sativus L. HOM05D005844 ORTHO05D007203 2.5e-95 352.8 275 64.4
Thecc.04G018700 Theobroma cacao HOM05D005844 ORTHO05D007203 4.3e-95 352.1 281 65.1
THA.LOC104805364 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 5.6e-95 351.7 282 64.2
vmacro05871 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 9.6e-95 350.9 291 63.9
FAN14G2428 Fragaria x ananassa HOM05D005844 ORTHO05D007203 2.1e-94 349.7 276 64.9
unitig_46.g18705 Utricularia gibba HOM05D005844 ORTHO05D007203 2.1e-94 349.7 274 65.3
ClCG09G019300 Citrullus lanatus HOM05D005844 ORTHO05D007203 2.8e-94 349.4 276 64.9
DCAR_021727 Daucus carota HOM05D005844 ORTHO05D007203 6.2e-94 348.2 214 77.1
FvH4_6g51630 Fragaria vesca HOM05D005844 ORTHO05D007203 1.1e-93 347.4 236 70.8
Peaxi162Scf00129g01647 Petunia axillaris HOM05D005844 ORTHO05D007203 5.2e-93 345.1 176 92.6
FAN09G1449 Fragaria x ananassa HOM05D005844 ORTHO05D007203 2.0e-92 343.2 276 63.8
Phvul.004G044500 Phaseolus vulgaris HOM05D005844 ORTHO05D007203 2.0e-92 343.2 272 63.6
MD17G1023500 Malus domestica HOM05D005844 ORTHO05D007203 4.4e-92 342.0 289 60.2
Sabra16G0223300 Salix brachista HOM05D005844 ORTHO05D007203 4.4e-92 342.0 248 70.2
Eucgr.I01735 Eucalyptus grandis HOM05D005844 ORTHO05D007203 7.6e-92 341.3 246 69.5
Lj1g0026070 Lotus japonicus HOM05D005844 ORTHO05D007203 9.9e-92 340.9 234 72.2
Medtr2g062880 Medicago truncatula HOM05D005844 ORTHO05D007203 1.3e-91 340.5 242 69.4
Prupe.3G293000 Prunus persica HOM05D005844 ORTHO05D007203 1.3e-91 340.5 222 72.5
FAN02G1237 Fragaria x ananassa HOM05D005844 ORTHO05D007203 1.7e-91 340.1 276 63.0
Cpa.g.c26638.3 Carica papaya HOM05D005844 ORTHO05D007203 2.9e-91 339.3 284 64.1
PSO407G0181 Papaver somniferum HOM05D005844 ORTHO05D007203 4.9e-91 338.6 252 66.3
Haze_14753 Corylus avellana HOM05D005844 ORTHO05D007203 8.4e-91 337.8 261 65.5
SGA_v2.0_scaffold18G08274 Striga asiatica HOM05D005844 ORTHO05D007203 1.1e-90 337.4 225 73.3
VMungo0464G1123 Vigna mungo HOM05D005844 ORTHO05D007203 1.9e-90 336.7 227 71.4
ATR0824G194 Amborella trichopoda HOM05D005844 ORTHO05D007203 7.1e-90 334.7 223 70.9
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea HOM05D005844 ORTHO05D007203 2.1e-89 333.2 214 73.8
Medtr7g033530 Medicago truncatula HOM05D005844 ORTHO05D007203 2.1e-89 333.2 239 69.9
PSO111G0092 Papaver somniferum HOM05D005844 ORTHO05D007203 2.7e-89 332.8 252 65.5
CANSAT64G0956 Cannabis sativa HOM05D005844 ORTHO05D007203 6.0e-89 331.6 284 63.0
Cfa007344 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.0e-88 330.9 236 71.2
Manes.15G150500 Manihot esculenta HOM05D005844 ORTHO05D007203 3.0e-88 329.3 279 64.2
Os02g0593900 Oryza sativa ssp. japonica HOM05D005844 ORTHO05D007203 5.1e-88 328.6 234 68.8
Carub.0007s3499 Capsella rubella HOM05D005844 ORTHO05D007203 2.5e-87 326.2 278 60.8
AL7G49290 Arabidopsis lyrata HOM05D005844 ORTHO05D007203 3.3e-87 325.9 226 70.4
Thhalv10027875m.g Eutrema salsugineum HOM05D005844 ORTHO05D007203 4.3e-87 325.5 282 59.6
CSS0002651 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 7.3e-87 324.7 278 64.0
Lalb_Chr08g0243241 Lupinus albus HOM05D005844 ORTHO05D007203 2.1e-86 323.2 276 61.2
AT5G40530 Arabidopsis thaliana HOM05D005844 ORTHO05D007203 3.6e-86 322.4 278 61.5
A04p13570 Brassica napus HOM05D005844 ORTHO05D007203 3.6e-86 322.4 282 59.6
Zm00001eb205620 Zea mays HOM05D005844 ORTHO05D007203 3.6e-86 322.4 229 65.9
Sp7g01340 Schrenkiella parvula HOM05D005844 ORTHO05D007203 1.1e-85 320.9 283 60.1
HPP92_020245 Vanilla planifolia HOM05D005844 ORTHO05D007203 2.4e-85 319.7 231 65.4
Aa31LG9G1090 Aethionema arabicum HOM05D005844 ORTHO05D007203 3.1e-85 319.3 284 61.3
BcaB06g27527 Brassica carinata HOM05D005844 ORTHO05D007203 3.1e-85 319.3 277 60.3
C04p47350 Brassica napus HOM05D005844 ORTHO05D007203 3.1e-85 319.3 283 59.4
MELO3C021585.2 Cucumis melo HOM05D005844 ORTHO05D007203 3.4e-84 315.8 276 60.1
BcaB02g07945 Brassica carinata HOM05D005844 ORTHO05D007203 8.4e-83 311.2 276 59.1
Psat4g044480 Pisum sativum HOM05D005844 ORTHO05D007203 1.2e-81 307.4 261 59.8
CAN.G473.16 Capsicum annuum HOM05D005844 ORTHO05D007203 3.9e-80 302.4 164 88.4
CDE09G0856 Ceratophyllum demersum HOM05D005844 ORTHO05D007203 8.7e-80 301.2 193 71.0
Glyma.19G056800 Glycine max HOM05D005844 ORTHO05D007203 1.9e-79 300.1 227 66.1
PSO754G0028 Papaver somniferum HOM05D005844 ORTHO05D007203 2.5e-79 299.7 249 59.8
Mapoly0055s0119 Marchantia polymorpha HOM05D005844 ORTHO05D007203 3.6e-78 295.8 223 61.4
Sed0014974 Sechium edule HOM05D005844 ORTHO05D007203 6.2e-78 295.0 236 63.6
Glyma.16G069400 Glycine max HOM05D005844 ORTHO05D007203 1.4e-77 293.9 214 66.4
VMungo1215G2157 Vigna mungo HOM05D005844 ORTHO05D007203 5.3e-77 292.0 225 64.4
SMO169G0126 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 4.5e-76 288.9 214 63.1
TAR629G2614 Trochodendron aralioides HOM05D005844 ORTHO05D007203 5.8e-76 288.5 230 63.0
AagrBONN_evm.TU.Sc2ySwM_344.1282 Anthoceros agrestis HOM05D005844 ORTHO05D007203 1.7e-75 287.0 246 59.3
BolC4t26336H Brassica oleracea HOM05D005844 ORTHO05D007203 8.4e-75 284.6 272 56.6
Ca_08532_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 1.1e-74 284.3 261 56.7
Ca_25854_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 1.1e-74 284.3 214 65.4
arahy.Tifrunner.gnm1.ann1.V6CENM Arachis hypogaea HOM05D005844 ORTHO05D007203 1.9e-74 283.5 234 61.1
BraA04t17017Z Brassica rapa HOM05D005844 ORTHO05D007203 1.9e-74 283.5 271 56.1
EL10Ac6g14092 Beta vulgaris HOM05D005844 ORTHO05D007203 3.2e-74 282.7 276 56.5
MBI06_g16054_MAGBIO Magnolia biondii HOM05D005844 ORTHO05D007203 9.3e-74 281.2 232 61.6
Lj7A600G48 Lonicera japonica HOM05D005844 ORTHO05D007203 1.2e-73 280.8 176 76.1
Hma1.2p1_1747F.1_g300470 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 3.5e-73 279.3 176 75.6
Pp3c18_8570 Physcomitrium patens HOM05D005844 ORTHO05D007203 2.3e-72 276.6 223 60.5
Lsat_1_v5_gn_1_11001 Lactuca sativa HOM05D005844 ORTHO05D007203 2.8e-70 269.6 168 76.8
CBR_g37477 Chara braunii HOM05D005844 ORTHO05D007203 6.2e-70 268.5 222 60.8
CARHR261450 Cardamine hirsuta HOM05D005844 ORTHO05D007203 2.9e-67 259.6 172 71.5
Cfa007349 Carpinus fangiana HOM05D005844 ORTHO05D007203 4.6e-65 252.3 236 60.2
Ah.03g137020 Amaranthus hybridus HOM05D001812 ORTHO05D001874 1.0e-59 234.6 194 62.4
MCO16G365 Micromonas commoda HOM05D005844 ORTHO05D007203 4.8e-54 215.7 215 54.0
Cre07.g323450 Chlamydomonas reinhardtii HOM05D005844 ORTHO05D007203 9.7e-47 191.4 258 42.2
vmacro09039 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 3.7e-46 189.5 271 46.1
Atru.chr6.2417 Acer truncatum HOM05D005844 ORTHO05D007203 5.9e-44 182.2 119 73.9
TPR.G1078 Trifolium pratense HOM05D005844 ORTHO05D007203 7.7e-44 181.8 121 68.6
SHI16461 Sapria himalayana HOM05D005844 ORTHO05D007203 1.4e-42 177.6 303 36.0
TPR.G11046 Trifolium pratense HOM05D005844 ORTHO05D007203 1.2e-41 174.5 137 60.6
PRCOL_00001214 Prasinoderma coloniale HOM05D005844 ORTHO05D007203 9.7e-39 164.9 261 40.2
TPR.G35964 Trifolium pratense HOM05D005844 ORTHO05D007203 2.6e-36 156.8 106 72.6
TAR629G1250 Trochodendron aralioides HOM05D005844 ORTHO05D007203 5.9e-36 155.6 122 63.1
SMO202G0011 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 4.8e-30 136.0 115 57.4
BolC4t27198H Brassica oleracea HOM05D005844 ORTHO05D007203 5.9e-28 129.0 125 56.8
QL12p001810 Quercus lobata HOM05D005844 ORTHO05D007203 1.5e-26 124.4 72 77.8
Atru.chr2.3681 Acer truncatum HOM05D005844 ORTHO05D007203 2.5e-26 123.6 70 81.4
Cfa024741 Carpinus fangiana HOM05D005844 ORTHO05D007203 8.0e-25 118.6 252 33.3
Rhsim10G0015100 Rhododendron simsii HOM05D014363 ORTHO05D019497 2.8e-22 110.2 70 72.9
SEGI_32629 Sequoiadendron giganteum HOM05D005844 ORTHO05D007203 9.1e-21 105.1 75 65.3
AUR62043289 Chenopodium quinoa HOM05D005844 ORTHO05D007203 2.4e-13 80.5 71 59.2
CARHR261460 Cardamine hirsuta HOM05D005844 ORTHO05D007203 3.1e-13 80.1 56 62.5
SHI16462 Sapria himalayana HOM05D005844 ORTHO05D007203 4.3e-10 69.7 86 45.3


User provided reference genes

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