Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.3e-60 236.1 113 100.0
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 2.3e-57 225.3 113 95.6
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 5.7e-56 220.7 113 92.9
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 9.7e-56 219.9 113 94.7
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 2.2e-55 218.8 113 93.8
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 8.2e-55 216.9 113 92.9
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 1.1e-54 216.5 113 91.2
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 2.9e-44 181.8 113 77.9
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 6.5e-44 180.6 114 80.7
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 5.5e-43 177.6 115 79.1
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 7.2e-43 177.2 96 88.5
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 1.2e-42 176.4 116 77.6
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 1.2e-42 176.4 114 79.8
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 1.6e-42 176.0 115 77.4
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 2.1e-42 175.6 115 74.8
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 2.7e-42 175.3 113 77.0
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 3.6e-42 174.9 114 76.3
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 6.1e-42 174.1 95 87.4
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 1.0e-41 173.3 114 75.4
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 1.4e-41 172.9 96 86.5
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 1.4e-41 172.9 114 74.6
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 1.4e-41 172.9 113 77.9
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 1.8e-41 172.6 97 85.6
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 2.3e-41 172.2 114 77.2
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 2.3e-41 172.2 114 76.3
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 3.0e-41 171.8 96 86.5
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 3.0e-41 171.8 113 74.3
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 5.2e-41 171.0 113 73.5
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 6.8e-41 170.6 114 74.6
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 6.8e-41 170.6 114 74.6
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 8.8e-41 170.2 123 75.6
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 8.8e-41 170.2 123 75.6
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 8.8e-41 170.2 114 73.7
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 1.2e-40 169.9 114 78.1
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.0e-40 169.1 114 72.8
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 5.7e-40 167.5 105 78.1
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 1.3e-39 166.4 96 82.3
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 1.7e-39 166.0 114 73.7
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 2.8e-39 165.2 103 77.7
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 3.7e-39 164.9 114 75.4
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 3.7e-39 164.9 113 71.7
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 3.7e-39 164.9 96 80.2
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 4.8e-39 164.5 96 80.2
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 4.8e-39 164.5 116 74.1
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 6.3e-39 164.1 96 83.3
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 6.3e-39 164.1 96 83.3
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 6.3e-39 164.1 110 73.6
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 8.3e-39 163.7 110 71.8
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 8.3e-39 163.7 103 79.6
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 1.1e-38 163.3 116 68.1
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 1.1e-38 163.3 114 73.7
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.1e-38 163.3 114 73.7
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.1e-38 163.3 114 73.7
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.1e-38 163.3 114 73.7
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 1.1e-38 163.3 114 71.9
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 1.8e-38 162.5 115 76.5
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 1.8e-38 162.5 116 68.1
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 2.4e-38 162.2 116 72.4
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 3.1e-38 161.8 96 80.2
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 3.1e-38 161.8 119 64.7
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 5.4e-38 161.0 96 77.1
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 5.4e-38 161.0 109 70.6
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 7.0e-38 160.6 112 67.9
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 9.1e-38 160.2 111 71.2
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 5.9e-37 157.5 94 78.7
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 7.7e-37 157.1 96 77.1
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 1.3e-36 156.4 94 77.7
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 2.9e-36 155.2 96 74.0
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 2.9e-36 155.2 94 77.7
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 3.8e-36 154.8 96 72.9
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 5.0e-36 154.5 94 74.5
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 5.0e-36 154.5 94 74.5
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 5.0e-36 154.5 94 74.5
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 5.0e-36 154.5 94 74.5
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 5.0e-36 154.5 94 74.5
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 5.0e-36 154.5 118 70.3
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 1.9e-35 152.5 96 70.8
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 2.5e-35 152.1 97 74.2
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 2.5e-35 152.1 115 64.3
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 5.5e-35 151.0 80 86.2
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 7.2e-35 150.6 106 71.7
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 2.1e-34 149.1 110 70.9
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 4.7e-34 147.9 122 62.3
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 8.0e-34 147.1 97 71.1
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 1.4e-33 146.4 81 84.0
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 4.0e-33 144.8 81 77.8
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 8.3e-31 137.1 87 72.4
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 2.5e-27 125.6 94 71.3
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 1.6e-26 122.9 108 61.1
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 2.3e-25 119.0 94 56.4
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 4.0e-25 118.2 89 62.9
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 6.8e-25 117.5 99 54.5
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 9.8e-24 113.6 94 52.1
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 9.8e-24 113.6 93 58.1
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 3.7e-23 111.7 64 84.4
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 2.7e-21 105.5 87 54.0
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 5.9e-21 104.4 60 81.7
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 1.3e-15 86.7 84 44.0
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 7.3e-11 70.9 93 34.4
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 9.2e-06 53.9 51 54.9


User provided reference genes

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