Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001859g0070 Nicotiana tabacum HOM05D006441 ORTHO05D008203 6.3e-105 384.4 240 100.0
Nitab4.5_0000776g0060 Nicotiana tabacum HOM05D006441 ORTHO05D008203 1.9e-93 346.3 233 95.7
Nitab4.5_0000142g0480 Nicotiana tabacum HOM05D006441 ORTHO05D008203 2.5e-93 345.9 233 79.4
Solyc02g092010.4 Solanum lycopersicum HOM05D006441 ORTHO05D008203 3.1e-75 285.8 233 69.5
Sopen02g036590 Solanum pennellii HOM05D006441 ORTHO05D008203 3.1e-75 285.8 233 69.5
PGSC0003DMG400021428 Solanum tuberosum HOM05D006441 ORTHO05D008203 5.2e-75 285.0 233 70.0
Peaxi162Scf00096g01848 Petunia axillaris HOM05D006441 ORTHO05D008203 1.5e-74 283.5 233 68.7
CAN.G1343.13 Capsicum annuum HOM05D006441 ORTHO05D008203 1.3e-73 280.4 233 68.2
MSTRG.23600 Avicennia marina HOM05D006441 ORTHO05D008203 3.9e-46 189.1 235 49.4
Cc07_g07440 Coffea canephora HOM05D006441 ORTHO05D008203 1.1e-43 181.0 236 51.7
CSS0036817 Camellia sinensis var. sinensis HOM05D006441 ORTHO05D008203 2.0e-42 176.8 239 49.0
CSS0047485 Camellia sinensis var. sinensis HOM05D006441 ORTHO05D008203 7.6e-42 174.9 239 49.0
Rhsim10G0094400 Rhododendron simsii HOM05D006441 ORTHO05D008203 7.6e-42 174.9 233 48.9
vmacro05378 Vaccinium macrocarpon HOM05D006441 ORTHO05D008203 9.9e-42 174.5 246 47.2
SGA_v2.0_scaffold269G46276 Striga asiatica HOM05D006441 ORTHO05D008203 8.4e-41 171.4 240 46.2
Dinv23055 Davidia involucrata HOM05D006441 ORTHO05D008203 7.1e-40 168.3 239 48.1
CANSAT01G2205 Cannabis sativa HOM05D006441 ORTHO05D008203 9.3e-40 167.9 240 47.1
Ciclev10025205m.g Citrus clementina HOM05D006441 ORTHO05D008203 3.5e-39 166.0 242 46.3
Prupe.6G215400 Prunus persica HOM05D006441 ORTHO05D008203 3.5e-39 166.0 240 46.7
unitig_899.g14592 Utricularia gibba HOM05D006441 ORTHO05D008203 2.3e-38 163.3 235 46.0
Hund16422 Selenicereus undatus HOM05D006441 ORTHO05D008203 5.1e-38 162.2 247 45.7
DCAR_010797 Daucus carota HOM05D006441 ORTHO05D008203 8.7e-38 161.4 238 46.2
Migut.H00320 Erythranthe guttata HOM05D006441 ORTHO05D008203 3.3e-37 159.5 242 43.8
Actinidia36417 Actinidia chinensis HOM05D006441 ORTHO05D008203 5.6e-37 158.7 243 44.9
HanXRQChr12g0377011 Helianthus annuus HOM05D006441 ORTHO05D008203 1.6e-36 157.1 230 44.8
MD02G1190600 Malus domestica HOM05D006441 ORTHO05D008203 2.8e-36 156.4 240 45.4
RcHm_v2.0_Chr1g0321831 Rosa chinensis HOM05D006441 ORTHO05D008203 3.7e-36 156.0 241 45.2
RcHm_v2.0_Chr2g0109061 Rosa chinensis HOM05D006441 ORTHO05D008203 4.8e-36 155.6 242 44.2
Thecc.01G077600 Theobroma cacao HOM05D006441 ORTHO05D008203 4.8e-36 155.6 264 42.8
TPR.G19350 Trifolium pratense HOM05D006441 ORTHO05D008203 1.4e-35 154.1 242 47.9
arahy.Tifrunner.gnm1.ann1.FY2PML Arachis hypogaea HOM05D006441 ORTHO05D008203 2.4e-35 153.3 249 45.8
Sc16g0002790 Simmondsia chinensis HOM05D006441 ORTHO05D008203 4.0e-35 152.5 240 46.7
arahy.Tifrunner.gnm1.ann1.H9DIKV Arachis hypogaea HOM05D006441 ORTHO05D008203 5.3e-35 152.1 249 45.8
Cfa006781 Carpinus fangiana HOM05D006441 ORTHO05D008203 5.3e-35 152.1 244 43.9
Lalb_Chr14g0365131 Lupinus albus HOM05D006441 ORTHO05D008203 9.0e-35 151.4 245 44.1
LjContig00049g0002658 Lotus japonicus HOM05D006441 ORTHO05D008203 1.2e-34 151.0 242 45.9
GSVIVG01002450001 Vitis vinifera HOM05D006441 ORTHO05D008203 1.5e-34 150.6 235 44.7
CiPaw.07G037300 Carya illinoinensis HOM05D006441 ORTHO05D008203 2.0e-34 150.2 240 45.4
Eucgr.H02336 Eucalyptus grandis HOM05D006441 ORTHO05D008203 2.6e-34 149.8 242 45.0
FAN19G0231 Fragaria x ananassa HOM05D006441 ORTHO05D008203 2.6e-34 149.8 244 43.9
Sabra07G0005900 Salix brachista HOM05D006441 ORTHO05D008203 2.6e-34 149.8 232 41.8
Duzib147G0493 Durio zibethinus HOM05D006441 ORTHO05D008203 3.4e-34 149.4 263 41.4
FvH4_1g18350 Fragaria vesca HOM05D006441 ORTHO05D008203 5.8e-34 148.7 244 43.4
QL06p038630 Quercus lobata HOM05D006441 ORTHO05D008203 7.6e-34 148.3 239 43.9
Glyma.02G280500 Glycine max HOM05D006441 ORTHO05D008203 1.0e-33 147.9 245 42.9
Atru.chr3.1073 Acer truncatum HOM05D006441 ORTHO05D008203 2.9e-33 146.4 254 39.8
Gohir.D11G211300 Gossypium hirsutum HOM05D006441 ORTHO05D008203 2.9e-33 146.4 252 42.1
Lsat_1_v5_gn_3_85860 Lactuca sativa HOM05D006441 ORTHO05D008203 3.8e-33 146.0 230 43.5
Medtr5g089970 Medicago truncatula HOM05D006441 ORTHO05D008203 3.8e-33 146.0 249 41.8
Manes.12G118300 Manihot esculenta HOM05D006441 ORTHO05D008203 8.4e-33 144.8 242 42.6
Phvul.008G200200 Phaseolus vulgaris HOM05D006441 ORTHO05D008203 1.4e-32 144.1 240 43.3
Gohir.A11G211600 Gossypium hirsutum HOM05D006441 ORTHO05D008203 1.9e-32 143.7 249 42.2
Gorai.007G227000 Gossypium raimondii HOM05D006441 ORTHO05D008203 1.9e-32 143.7 252 41.7
Lj4A166T80 Lonicera japonica HOM05D006441 ORTHO05D008203 3.2e-32 142.9 264 39.0
TWI53G1431 Tripterygium wilfordii HOM05D006441 ORTHO05D008203 7.1e-32 141.7 248 40.3
FAN23G0818 Fragaria x ananassa HOM05D006441 ORTHO05D008203 2.1e-31 140.2 232 44.4
FAN26G0165 Fragaria x ananassa HOM05D006441 ORTHO05D008203 2.1e-31 140.2 233 43.8
Potri.007G007700 Populus trichocarpa HOM05D006441 ORTHO05D008203 2.1e-31 140.2 242 49.2
ECA246G2498 Erigeron canadensis HOM05D006441 ORTHO05D008203 2.7e-31 139.8 230 43.9
Cpa.g.sc129.63 Carica papaya HOM05D006441 ORTHO05D008203 7.9e-31 138.3 257 40.1
PGR102G2456 Punica granatum HOM05D006441 ORTHO05D008203 1.3e-30 137.5 245 41.6
GSVIVG01002709001 Vitis vinifera HOM05D006441 ORTHO05D008203 3.9e-30 136.0 216 44.0
VMungo0647G1795 Vigna mungo HOM05D006441 ORTHO05D008203 1.1e-29 134.4 240 40.4
TAR628G0068 Trochodendron aralioides HOM05D006441 ORTHO05D008203 1.5e-29 134.0 249 41.8
Ah.03g140760 Amaranthus hybridus HOM05D006441 ORTHO05D008203 9.7e-29 131.3 238 41.6
CsaV3_4G008510 Cucumis sativus L. HOM05D006441 ORTHO05D008203 9.7e-29 131.3 237 40.1
Ca_06220_v3 Cicer arietinum L. HOM05D006441 ORTHO05D008203 1.3e-28 131.0 241 55.6
AUR62007550 Chenopodium quinoa HOM05D006441 ORTHO05D008203 4.8e-28 129.0 254 39.4
PSO675G4807 Papaver somniferum HOM05D006441 ORTHO05D008203 1.1e-27 127.9 240 42.1
EL10Ac6g15582 Beta vulgaris HOM05D006441 ORTHO05D008203 6.9e-27 125.2 243 39.1
Sed0000343 Sechium edule HOM05D006441 ORTHO05D008203 1.5e-26 124.0 244 37.7
PSO541G6514 Papaver somniferum HOM05D006441 ORTHO05D008203 7.6e-26 121.7 239 37.7
AUR62004040 Chenopodium quinoa HOM05D006441 ORTHO05D008203 1.0e-25 121.3 239 40.6
CARHR158800 Cardamine hirsuta HOM05D006441 ORTHO05D008203 2.2e-25 120.2 234 37.6
Os03g0727900 Oryza sativa ssp. japonica HOM05D006441 ORTHO05D008203 8.5e-25 118.2 239 37.7
Psat2g019320 Pisum sativum HOM05D006441 ORTHO05D008203 4.2e-24 115.9 223 47.1
Thhalv10010236m.g Eutrema salsugineum HOM05D006441 ORTHO05D008203 3.6e-23 112.8 243 39.9
ATR0019G023 Amborella trichopoda HOM05D006441 ORTHO05D008203 6.1e-23 112.1 234 37.6
FAN28G0499 Fragaria x ananassa HOM05D006441 ORTHO05D000355 6.1e-23 112.1 225 40.0
Zm00001eb055970 Zea mays HOM05D006441 ORTHO05D008203 7.9e-23 111.7 239 36.4
Aqoxy6G02956 Aquilegia oxysepala HOM05D006441 ORTHO05D008203 1.8e-22 110.5 259 35.1
AT3G49725 Arabidopsis thaliana HOM05D006441 ORTHO05D008203 3.0e-22 109.8 232 37.5
Nn6g34544 Nelumbo nucifera HOM05D006441 ORTHO05D008203 3.0e-22 109.8 211 41.7
CDE07G0466 Ceratophyllum demersum HOM05D006441 ORTHO05D008203 5.1e-22 109.0 234 37.2
C08p24750 Brassica napus HOM05D006441 ORTHO05D008203 8.7e-22 108.2 250 35.2
Carub.0005s1608 Capsella rubella HOM05D006441 ORTHO05D008203 1.1e-21 107.8 234 41.9
BolC8t50089H Brassica oleracea HOM05D006441 ORTHO05D008203 2.5e-21 106.7 246 41.1
AL5G29680 Arabidopsis lyrata HOM05D006441 ORTHO05D008203 7.4e-21 105.1 241 35.7
A06p17970 Brassica napus HOM05D006441 ORTHO05D008203 4.8e-20 102.4 241 46.9
Aa31LG4G18210 Aethionema arabicum HOM05D006441 ORTHO05D008203 9.1e-19 98.2 241 34.9
BcaB01g00678 Brassica carinata HOM05D006441 ORTHO05D008203 9.1e-19 98.2 228 36.8
ClCG07G009810 Citrullus lanatus HOM05D006441 ORTHO05D008203 5.9e-18 95.5 225 35.1
MELO3C024853.2 Cucumis melo HOM05D006441 ORTHO05D008203 5.0e-17 92.4 220 35.0
Sp5g12360 Schrenkiella parvula HOM05D006441 ORTHO05D008203 1.4e-16 90.9 229 32.3
HPP92_008937 Vanilla planifolia HOM05D006441 ORTHO05D008203 1.4e-16 90.9 232 32.3
THA.LOC104821215 Tarenaya hassleriana HOM05D006441 ORTHO05D008203 3.2e-16 89.7 88 56.8
BcaC07g39436 Brassica carinata HOM05D006441 ORTHO05D008203 4.2e-16 89.4 64 68.8
BraA06t24888Z Brassica rapa HOM05D006441 ORTHO05D008203 4.2e-16 89.4 64 68.8
SMO114G0120 Selaginella moellendorffii HOM05D004392 ORTHO05D004846 7.2e-16 88.6 66 69.7
MD15G1301700 Malus domestica HOM05D006441 ORTHO05D008203 1.2e-15 87.8 200 36.0
SEGI_39991 Sequoiadendron giganteum HOM05D006441 ORTHO05D008203 6.1e-15 85.5 232 32.3
Mapoly0061s0091 Marchantia polymorpha HOM05D006441 ORTHO05D008203 7.9e-15 85.1 63 71.4
Oeu011414.1 Olea europaea HOM05D006441 ORTHO05D008203 7.9e-15 85.1 55 80.0
COL.COLO4_11627 Corchorus olitorius HOM05D006441 ORTHO05D008203 1.5e-13 80.9 118 44.9
Cre07.g353200 Chlamydomonas reinhardtii HOM05D006441 ORTHO05D008203 4.5e-10 69.3 74 54.1
Ciclev10018139m.g Citrus clementina HOM05D006441 ORTHO05D008203 1.3e-09 67.8 110 43.6
SHI11993 Sapria himalayana HOM05D006441 ORTHO05D008203 1.7e-09 67.4 233 28.3
Haze_27107 Corylus avellana HOM05D002561 ORTHO05D008175 2.7e-07 60.1 62 46.8
Actinidia11960 Actinidia chinensis HOM05D006441 ORTHO05D030846 2.3e-06 57.0 80 45.0
Cre16.g665650 Chlamydomonas reinhardtii HOM05D002561 ORTHO05D008175 5.2e-06 55.8 61 47.5
PRCOL_00004156 Prasinoderma coloniale HOM05D002561 ORTHO05D008175 5.2e-06 55.8 61 54.1
QL02p010149 Quercus lobata HOM05D002561 ORTHO05D008175 8.8e-06 55.1 61 52.5


User provided reference genes

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