Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001853g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 8.5e-69 263.5 126 100.0
Nitab4.5_0001853g0060 Nicotiana tabacum HOM05D005923 ORTHO05D007376 1.4e-66 256.1 126 96.8
Nitab4.5_0009631g0020 Nicotiana tabacum HOM05D005923 ORTHO05D007376 6.2e-35 151.0 79 92.4
Nitab4.5_0001003g0070 Nicotiana tabacum HOM05D005923 ORTHO05D007376 2.9e-32 142.1 78 83.3
PGSC0003DMG400016251 Solanum tuberosum HOM05D005923 ORTHO05D007376 3.9e-29 131.7 77 80.5
Solyc11g008570.2 Solanum lycopersicum HOM05D005923 ORTHO05D007376 1.5e-28 129.8 77 80.5
Sopen11g004360 Solanum pennellii HOM05D005923 ORTHO05D007376 1.5e-28 129.8 77 80.5
Peaxi162Scf00296g01112 Petunia axillaris HOM05D005923 ORTHO05D007376 2.5e-28 129.0 78 75.6
CAN.G321.22 Capsicum annuum HOM05D005923 ORTHO05D007376 1.8e-26 122.9 79 70.9
Cc09_g04040 Coffea canephora HOM05D005923 ORTHO05D007376 1.9e-23 112.8 79 62.0
Dinv21358 Davidia involucrata HOM05D005923 ORTHO05D007376 4.6e-22 108.2 79 60.8
Actinidia03247 Actinidia chinensis HOM05D005923 ORTHO05D007376 6.0e-22 107.8 79 58.2
CSS0002064 Camellia sinensis var. sinensis HOM05D005923 ORTHO05D007376 2.3e-21 105.9 79 59.5
vmacro19542 Vaccinium macrocarpon HOM05D005923 ORTHO05D007376 5.1e-21 104.8 79 58.2
Oeu034703.2 Olea europaea HOM05D005923 ORTHO05D007376 6.6e-21 104.4 71 63.4
MSTRG.27409 Avicennia marina HOM05D005923 ORTHO05D007376 9.6e-20 100.5 79 60.8
Migut.F02096 Erythranthe guttata HOM05D005923 ORTHO05D007376 2.1e-19 99.4 80 60.0
Lsat_1_v5_gn_0_14641 Lactuca sativa HOM05D005923 ORTHO05D007376 3.6e-19 98.6 79 53.2
Rhsim05G0165000 Rhododendron simsii HOM05D005923 ORTHO05D007376 2.4e-18 95.9 79 53.2
SalBow1G1244 Salvia bowleyana HOM05D005923 ORTHO05D007376 3.1e-18 95.5 79 57.0
Potri.008G077000 Populus trichocarpa HOM05D005923 ORTHO05D007376 5.3e-18 94.7 89 51.7
SalBow1G7804 Salvia bowleyana HOM05D005923 ORTHO05D007376 6.9e-18 94.4 79 55.7
DCAR_031594 Daucus carota HOM05D005923 ORTHO05D007376 9.0e-18 94.0 78 55.1
ECA232G3428 Erigeron canadensis HOM05D005923 ORTHO05D007376 9.0e-18 94.0 79 53.2
AUR62034530 Chenopodium quinoa HOM05D005923 ORTHO05D007376 5.8e-17 91.3 72 58.3
SGA_v2.0_scaffold62G21491 Striga asiatica HOM05D005923 ORTHO05D007376 5.8e-17 91.3 71 53.5
AUR62014468 Chenopodium quinoa HOM05D005923 ORTHO05D007376 1.7e-16 89.7 72 56.9
Cfa006234 Carpinus fangiana HOM05D005923 ORTHO05D007376 3.8e-16 88.6 80 55.0
Potri.010G180800 Populus trichocarpa HOM05D005923 ORTHO05D007376 3.8e-16 88.6 83 53.0
Actinidia06787 Actinidia chinensis HOM05D005923 ORTHO05D007376 4.9e-16 88.2 68 60.3
HanXRQChr10g0283011 Helianthus annuus HOM05D005923 ORTHO05D007376 4.9e-16 88.2 81 48.1
Lj8A198T52 Lonicera japonica HOM05D005923 ORTHO05D007376 6.4e-16 87.8 80 56.2
Haze_04596 Corylus avellana HOM05D005923 ORTHO05D007376 1.1e-15 87.0 80 53.8
Sabra10G0138600 Salix brachista HOM05D005923 ORTHO05D007376 1.1e-15 87.0 104 46.2
Sc16g0010600 Simmondsia chinensis HOM05D005923 ORTHO05D007376 1.1e-15 87.0 80 52.5
TAR365G1048 Trochodendron aralioides HOM05D005923 ORTHO05D007376 1.4e-15 86.7 80 52.5
Glyma.18G244700 Glycine max HOM05D005923 ORTHO05D007376 2.4e-15 85.9 80 51.2
RcHm_v2.0_Chr3g0447491 Rosa chinensis HOM05D005923 ORTHO05D007376 3.2e-15 85.5 80 51.2
arahy.Tifrunner.gnm1.ann1.51VLQD Arachis hypogaea HOM05D005923 ORTHO05D007376 4.2e-15 85.1 83 49.4
arahy.Tifrunner.gnm1.ann1.VQ08NH Arachis hypogaea HOM05D005923 ORTHO05D007376 4.2e-15 85.1 83 49.4
PGR031G2609 Punica granatum HOM05D005923 ORTHO05D007376 4.2e-15 85.1 101 46.5
Sabra08G0057400 Salix brachista HOM05D005923 ORTHO05D007376 4.2e-15 85.1 86 51.2
Duzib128G1624 Durio zibethinus HOM05D005923 ORTHO05D007376 7.1e-15 84.3 84 53.6
Psat3g105160 Pisum sativum HOM05D005923 ORTHO05D007376 7.1e-15 84.3 80 56.2
Medtr7g080490 Medicago truncatula HOM05D005923 ORTHO05D007376 9.3e-15 84.0 80 52.5
Thecc.05G188500 Theobroma cacao HOM05D005923 ORTHO05D007376 9.3e-15 84.0 78 50.0
GSVIVG01003759001 Vitis vinifera HOM05D005923 ORTHO05D007376 9.3e-15 84.0 77 57.1
CANSAT21G0310 Cannabis sativa HOM05D005923 ORTHO05D007376 1.6e-14 83.2 80 50.0
Lj1g0007040 Lotus japonicus HOM05D005923 ORTHO05D007376 1.6e-14 83.2 80 55.0
Ah.06g195310 Amaranthus hybridus HOM05D005923 ORTHO05D007376 2.1e-14 82.8 68 54.4
FvH4_6g00140 Fragaria vesca HOM05D005923 ORTHO05D007376 2.1e-14 82.8 80 51.2
Gohir.A02G106500 Gossypium hirsutum HOM05D005923 ORTHO05D007376 2.1e-14 82.8 83 49.4
EL10Ac4g10017 Beta vulgaris HOM05D005923 ORTHO05D007376 2.7e-14 82.4 80 48.8
THA.LOC104827232 Tarenaya hassleriana HOM05D005923 ORTHO05D007376 2.7e-14 82.4 80 48.8
MD12G1262500 Malus domestica HOM05D005923 ORTHO05D007376 3.5e-14 82.0 80 48.8
CiPaw.07G083600 Carya illinoinensis HOM05D005923 ORTHO05D007376 4.6e-14 81.6 80 52.5
Gohir.D03G071400 Gossypium hirsutum HOM05D005923 ORTHO05D007376 4.6e-14 81.6 83 49.4
Gorai.003G088600 Gossypium raimondii HOM05D005923 ORTHO05D007376 6.0e-14 81.3 80 50.0
Manes.12G002100 Manihot esculenta HOM05D005923 ORTHO05D007376 6.0e-14 81.3 82 47.6
Ciclev10011172m.g Citrus clementina HOM05D005923 ORTHO05D007376 7.9e-14 80.9 80 47.5
TWI18G0568 Tripterygium wilfordii HOM05D005923 ORTHO05D007376 7.9e-14 80.9 80 47.5
Lalb_Chr03g0038141 Lupinus albus HOM05D005923 ORTHO05D007376 1.0e-13 80.5 80 50.0
Prupe.6G364500 Prunus persica HOM05D005923 ORTHO05D007376 1.0e-13 80.5 80 50.0
Hund21927 Selenicereus undatus HOM05D005923 ORTHO05D007376 1.3e-13 80.1 80 47.5
Atru.chr12.1696 Acer truncatum HOM05D005923 ORTHO05D007376 1.7e-13 79.7 95 44.2
Ah.04g159240 Amaranthus hybridus HOM05D005923 ORTHO05D007376 2.3e-13 79.3 80 46.2
A05p43880 Brassica napus HOM05D005923 ORTHO05D007376 2.3e-13 79.3 79 48.1
COL.COLO4_36605 Corchorus olitorius HOM05D005923 ORTHO05D007376 2.3e-13 79.3 84 53.6
QL10p015972 Quercus lobata HOM05D005923 ORTHO05D007376 2.3e-13 79.3 80 47.5
Glyma.09G248100 Glycine max HOM05D005923 ORTHO05D007376 3.0e-13 79.0 80 48.8
Nn013s41460 Nelumbo nucifera HOM05D005923 ORTHO05D007376 3.9e-13 78.6 80 50.0
Phvul.008G051900 Phaseolus vulgaris HOM05D005923 ORTHO05D007376 3.9e-13 78.6 80 51.2
Atru.chr12.1669 Acer truncatum HOM05D005923 ORTHO05D007376 5.1e-13 78.2 95 43.2
MD04G1248200 Malus domestica HOM05D005923 ORTHO05D007376 5.1e-13 78.2 80 48.8
Sed0021637 Sechium edule HOM05D005923 ORTHO05D007376 5.1e-13 78.2 83 45.8
VMungo1383G0851 Vigna mungo HOM05D005923 ORTHO05D007376 5.1e-13 78.2 92 46.7
TPR.G31231 Trifolium pratense HOM05D005923 ORTHO05D007376 6.6e-13 77.8 80 50.0
Ca_08014_v3 Cicer arietinum L. HOM05D005923 ORTHO05D007376 8.7e-13 77.4 80 48.8
BraA05t23125Z Brassica rapa HOM05D005923 ORTHO05D007376 1.1e-12 77.0 79 46.8
Cpa.g.sc99.42 Carica papaya HOM05D005923 ORTHO05D007376 1.9e-12 76.3 80 46.2
C05p63470 Brassica napus HOM05D005923 ORTHO05D007376 4.3e-12 75.1 98 40.8
BolC5t35012H Brassica oleracea HOM05D005923 ORTHO05D007376 4.3e-12 75.1 98 40.8
Thhalv10020144m.g Eutrema salsugineum HOM05D005923 ORTHO05D007376 4.3e-12 75.1 80 45.0
AT3G03305 Arabidopsis thaliana HOM05D005923 ORTHO05D007376 9.6e-12 73.9 80 45.0
Carub.0003s0247 Capsella rubella HOM05D005923 ORTHO05D007376 9.6e-12 73.9 80 45.0
Sp3g02330 Schrenkiella parvula HOM05D005923 ORTHO05D007376 9.6e-12 73.9 80 43.8
Aqoxy2G04094 Aquilegia oxysepala HOM05D005923 ORTHO05D007376 1.6e-11 73.2 79 50.6
Aa31LG5G13800 Aethionema arabicum HOM05D005923 ORTHO05D000304 2.1e-11 72.8 79 44.3
CsaV3_2G010290 Cucumis sativus L. HOM05D005923 ORTHO05D007376 2.1e-11 72.8 80 45.0
CARHR077340 Cardamine hirsuta HOM05D005923 ORTHO05D007376 2.8e-11 72.4 80 43.8
PSO675G7036 Papaver somniferum HOM05D005923 ORTHO05D007376 3.6e-11 72.0 81 45.7
Eucgr.B01459 Eucalyptus grandis HOM05D005923 ORTHO05D007376 1.1e-10 70.5 80 42.5
PSO732G0688 Papaver somniferum HOM05D005923 ORTHO05D007376 1.4e-10 70.1 96 37.5
ClCG11G012400 Citrullus lanatus HOM05D005923 ORTHO05D007376 1.8e-10 69.7 80 42.5
AL3G12930 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 2.4e-10 69.3 80 41.2
MBI08_g20603_MAGBIO Magnolia biondii HOM05D005923 ORTHO05D007376 3.1e-10 68.9 86 40.7
Atru.chr12.1657 Acer truncatum HOM05D005923 ORTHO05D007376 2.6e-09 65.9 74 44.6
unitig_46.g18570 Utricularia gibba HOM05D005923 ORTHO05D007376 2.9e-08 62.4 58 46.6
ATR0824G241 Amborella trichopoda HOM05D005923 ORTHO05D007376 8.4e-08 60.8 78 38.5
Zm00001eb144980 Zea mays HOM05D005923 ORTHO05D007376 8.4e-08 60.8 93 35.5
Os01g0894000 Oryza sativa ssp. japonica HOM05D005923 ORTHO05D007376 1.9e-07 59.7 81 37.0
AL3G13260 Arabidopsis lyrata HOM05D005923 ORTHO05D007376 1.2e-06 57.0 55 47.3
HPP92_013562 Vanilla planifolia HOM05D005923 ORTHO05D007376 4.6e-06 55.1 103 31.1


User provided reference genes

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