Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.1e-69 266.5 141 100.0
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 3.0e-62 241.9 141 92.9
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 1.9e-45 186.0 141 75.2
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 4.8e-44 181.4 141 75.2
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 8.1e-44 180.6 141 74.5
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 2.4e-43 179.1 141 73.8
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 2.4e-43 179.1 141 73.8
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 4.0e-43 178.3 141 73.8
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 2.3e-38 162.5 140 67.1
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 1.1e-32 143.7 141 61.0
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 3.6e-31 138.7 141 58.2
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 4.6e-31 138.3 137 62.0
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.0e-30 137.1 87 82.8
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 1.3e-30 136.7 141 58.9
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 1.3e-30 136.7 140 62.1
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 6.7e-30 134.4 141 58.2
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 6.7e-30 134.4 141 58.2
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 8.7e-30 134.0 109 70.6
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 4.3e-29 131.7 103 71.8
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 9.7e-29 130.6 141 54.6
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 9.7e-29 130.6 140 55.7
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 9.7e-29 130.6 141 53.9
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.3e-28 130.2 93 74.2
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 2.2e-28 129.4 144 57.6
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 2.2e-28 129.4 127 63.0
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 3.7e-28 128.6 128 60.9
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 6.3e-28 127.9 136 58.1
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 1.1e-27 127.1 137 56.2
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.4e-27 126.7 141 55.3
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 4.1e-27 125.2 134 58.2
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 5.3e-27 124.8 116 60.3
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 5.3e-27 124.8 137 54.7
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 5.3e-27 124.8 141 53.9
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 6.9e-27 124.4 126 57.1
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 1.5e-26 123.2 129 55.8
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 2.0e-26 122.9 144 54.9
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 2.6e-26 122.5 131 56.5
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 2.6e-26 122.5 133 53.4
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 2.6e-26 122.5 113 61.9
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 1.0e-25 120.6 126 56.3
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.3e-25 120.2 137 54.0
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 1.3e-25 120.2 126 56.3
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 1.7e-25 119.8 137 51.1
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 2.2e-25 119.4 137 54.7
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 2.2e-25 119.4 104 62.5
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 2.2e-25 119.4 126 55.6
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 2.2e-25 119.4 91 71.4
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 2.9e-25 119.0 125 56.8
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 5.0e-25 118.2 126 55.6
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 5.0e-25 118.2 126 55.6
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 8.5e-25 117.5 132 54.5
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 8.5e-25 117.5 126 55.6
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 1.4e-24 116.7 127 54.3
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 1.4e-24 116.7 126 54.8
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 1.9e-24 116.3 87 70.1
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 1.9e-24 116.3 93 66.7
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 1.9e-24 116.3 93 66.7
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 1.9e-24 116.3 139 51.8
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.9e-24 116.3 89 70.8
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 2.5e-24 115.9 108 61.1
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 2.5e-24 115.9 137 51.8
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 2.5e-24 115.9 93 69.9
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 2.5e-24 115.9 87 70.1
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 3.2e-24 115.5 91 68.1
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 3.2e-24 115.5 139 51.1
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 3.2e-24 115.5 138 51.4
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 3.2e-24 115.5 83 72.3
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 4.2e-24 115.2 87 69.0
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 4.2e-24 115.2 87 69.0
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 4.2e-24 115.2 87 69.0
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 7.2e-24 114.4 87 70.1
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 7.2e-24 114.4 132 54.5
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 7.2e-24 114.4 136 52.2
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 7.2e-24 114.4 141 48.9
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 9.4e-24 114.0 108 59.3
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 1.2e-23 113.6 102 60.8
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 1.2e-23 113.6 87 69.0
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 1.2e-23 113.6 102 60.8
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 1.2e-23 113.6 87 69.0
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 1.2e-23 113.6 124 57.3
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 1.6e-23 113.2 127 52.8
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 1.6e-23 113.2 127 52.8
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 1.6e-23 113.2 102 59.8
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 2.1e-23 112.8 110 60.9
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 2.1e-23 112.8 135 51.9
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 2.7e-23 112.5 84 70.2
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 2.7e-23 112.5 132 51.5
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 4.6e-23 111.7 127 55.9
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 4.6e-23 111.7 84 70.2
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 4.6e-23 111.7 141 48.9
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 1.0e-22 110.5 141 48.2
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 1.4e-22 110.2 137 49.6
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 1.8e-22 109.8 135 48.9
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 1.8e-22 109.8 117 54.7
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 1.8e-22 109.8 107 56.1
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 3.0e-22 109.0 132 52.3
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 6.7e-22 107.8 130 50.0
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 4.4e-21 105.1 148 50.7
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 5.7e-21 104.8 88 62.5
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 9.7e-21 104.0 87 63.2
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 9.7e-21 104.0 130 49.2
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 2.8e-20 102.4 141 46.8
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 3.7e-20 102.1 86 64.0
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 6.3e-20 101.3 87 63.2
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.4e-19 100.1 136 48.5
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 3.1e-19 99.0 130 47.7
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 1.2e-18 97.1 73 71.2
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 5.9e-18 94.7 87 57.5
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 1.0e-17 94.0 110 51.8
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.7e-17 93.2 86 60.5
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 1.1e-16 90.5 86 55.8
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 1.9e-16 89.7 68 69.1
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 4.2e-16 88.6 107 50.5
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 7.2e-16 87.8 65 72.3
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 3.6e-15 85.5 65 72.3
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 8.8e-14 80.9 110 44.5
Nitab4.5_0003061g0010 Nicotiana tabacum HOM05D028347 ORTHO05D007224 1.1e-13 80.5 61 73.8
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 1.5e-13 80.1 86 50.0
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 7.4e-13 77.8 95 52.6
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 9.7e-13 77.4 121 38.8
Nitab4.5_0001130g0140 Nicotiana tabacum HOM05D028347 ORTHO05D007224 1.7e-12 76.6 61 70.5
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 2.8e-12 75.9 85 48.2
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 7.0e-11 71.2 91 48.4
Nitab4.5_0011474g0030 Nicotiana tabacum HOM05D028347 ORTHO05D007224 7.0e-11 71.2 61 63.9
Nitab4.5_0001130g0080 Nicotiana tabacum HOM05D028347 ORTHO05D007224 1.0e-09 67.4 58 67.2
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 2.9e-09 65.9 86 40.7
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 3.8e-09 65.5 114 34.2
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 3.2e-08 62.4 87 46.0
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 8.8e-06 54.3 107 29.9


User provided reference genes

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