Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.6e-98 362.8 200 100.0
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.6e-69 266.5 199 79.9
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 3.2e-54 215.7 123 90.2
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 4.7e-53 211.8 123 89.4
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 8.0e-53 211.1 123 88.6
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 6.8e-52 208.0 123 87.8
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 5.7e-51 204.9 123 86.2
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 3.7e-50 202.2 121 86.0
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 1.4e-44 183.7 120 76.7
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 2.3e-44 183.0 180 60.0
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 4.0e-44 182.2 121 76.9
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 1.5e-43 180.3 121 75.2
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 1.5e-43 180.3 117 77.8
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 3.4e-43 179.1 118 78.0
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 7.5e-43 177.9 116 80.2
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 3.7e-42 175.6 124 74.2
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 4.9e-42 175.3 120 75.0
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 8.3e-42 174.5 121 71.9
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 8.3e-42 174.5 101 86.1
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 1.8e-41 173.3 117 75.2
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 4.1e-41 172.2 121 76.9
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 5.4e-41 171.8 95 91.6
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 1.2e-40 170.6 124 75.8
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 1.6e-40 170.2 122 74.6
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 2.0e-40 169.9 120 75.0
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 2.0e-40 169.9 121 73.6
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 2.7e-40 169.5 99 85.9
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 4.5e-40 168.7 100 83.0
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 7.8e-40 167.9 102 86.3
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 1.0e-39 167.5 102 85.3
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 1.3e-39 167.2 117 71.8
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 1.3e-39 167.2 118 72.0
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 1.7e-39 166.8 119 72.3
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 1.7e-39 166.8 158 61.4
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 1.7e-39 166.8 103 82.5
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 2.3e-39 166.4 103 82.5
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 2.9e-39 166.0 114 72.8
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 6.6e-39 164.9 98 82.7
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 8.6e-39 164.5 123 69.9
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.1e-38 164.1 123 71.5
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 1.1e-38 164.1 118 73.7
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 1.5e-38 163.7 99 80.8
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 1.9e-38 163.3 122 73.0
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 1.9e-38 163.3 123 71.5
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 1.9e-38 163.3 98 83.7
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 2.5e-38 162.9 125 68.8
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 2.5e-38 162.9 97 82.5
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 3.3e-38 162.5 118 71.2
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 5.6e-38 161.8 110 75.5
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 7.3e-38 161.4 127 69.3
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 7.3e-38 161.4 121 67.8
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 1.2e-37 160.6 118 68.6
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 1.2e-37 160.6 103 81.6
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 1.2e-37 160.6 123 65.9
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 2.1e-37 159.8 123 67.5
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 2.8e-37 159.5 118 68.6
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 6.1e-37 158.3 136 64.7
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 1.4e-36 157.1 121 67.8
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 3.0e-36 156.0 117 67.5
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 4.0e-36 155.6 121 66.9
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.0e-36 155.6 97 84.5
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 5.2e-36 155.2 118 66.9
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 6.8e-36 154.8 121 66.9
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 1.2e-35 154.1 126 64.3
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 1.5e-35 153.7 94 80.9
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 4.4e-35 152.1 125 63.2
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 5.8e-35 151.8 98 76.5
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 7.5e-35 151.4 98 76.5
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 7.5e-35 151.4 99 77.8
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 9.8e-35 151.0 123 63.4
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 1.3e-34 150.6 105 71.4
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 1.3e-34 150.6 141 62.4
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 2.2e-34 149.8 118 64.4
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 4.9e-34 148.7 100 76.0
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 4.9e-34 148.7 116 69.0
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 6.4e-34 148.3 117 65.0
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 6.4e-34 148.3 117 65.0
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 8.3e-34 147.9 124 62.1
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.8e-33 146.7 118 61.0
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 2.7e-32 142.9 121 66.1
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 3.0e-31 139.4 120 64.2
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 3.0e-31 139.4 120 64.2
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 2.5e-30 136.3 102 69.6
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 2.5e-30 136.3 96 71.9
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 2.8e-29 132.9 113 67.3
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 3.6e-29 132.5 166 51.8
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 6.2e-29 131.7 119 59.7
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 4.0e-28 129.0 208 42.8
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 8.9e-28 127.9 121 55.4
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 5.8e-27 125.2 103 64.1
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 1.3e-26 124.0 117 58.1
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 1.3e-26 124.0 98 64.3
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 3.7e-26 122.5 119 53.8
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 2.4e-25 119.8 105 55.2
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 8.6e-23 111.3 118 52.5
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 1.9e-22 110.2 111 55.0
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 1.9e-22 110.2 111 55.0
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 2.5e-22 109.8 100 59.0
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 2.5e-22 109.8 100 59.0
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 2.5e-22 109.8 100 59.0
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 5.6e-22 108.6 111 55.0
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 9.5e-22 107.8 111 53.2
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 9.5e-22 107.8 62 88.7
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 1.6e-21 107.1 98 58.2
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 2.1e-21 106.7 118 50.8
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 8.1e-21 104.8 118 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 2.3e-20 103.2 102 49.0
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 2.3e-20 103.2 111 51.4
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 2.0e-19 100.1 86 62.8
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 3.7e-18 95.9 62 79.0
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 3.7e-18 95.9 118 42.4
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 6.4e-18 95.1 66 71.2
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 4.1e-17 92.4 123 40.7
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 4.6e-16 89.0 53 84.9
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 7.8e-16 88.2 64 68.8
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 1.0e-15 87.8 64 68.8
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 1.3e-15 87.4 64 68.8
Solyc01g098540.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 1.1e-14 84.3 62 77.4
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 2.5e-14 83.2 202 30.7
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 1.8e-12 77.0 54 68.5
MBI02_g40862_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.4e-12 76.6 53 71.7
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.4e-12 76.6 53 71.7
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 3.1e-12 76.3 65 61.5
Thhalv10003352m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 2.6e-11 73.2 118 41.5
MBI18_g19775_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 5.8e-11 72.0 57 63.2
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 6.4e-10 68.6 62 54.8
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 3.2e-09 66.2 45 73.3
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 2.1e-08 63.5 66 45.5
MBI16_g45671_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 3.5e-08 62.8 78 48.7
SMO116G0410 Selaginella moellendorffii HOM05D005370 ORTHO05D006659 1.0e-07 61.2 75 42.7
SEGI_37606 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 3.0e-07 59.7 43 60.5
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 3.9e-07 59.3 62 51.6


User provided reference genes

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