Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001838g0030 Nicotiana tabacum HOM05D006284 ORTHO05D007793 1.2e-76 289.7 139 100.0
Nitab4.5_0001304g0050 Nicotiana tabacum HOM05D006284 ORTHO05D007793 4.8e-73 277.7 139 95.7
Solyc06g075990.4 Solanum lycopersicum HOM05D006284 ORTHO05D007793 3.0e-67 258.5 134 89.6
Sopen06g032410 Solanum pennellii HOM05D006284 ORTHO05D007793 3.0e-67 258.5 135 88.9
PGSC0003DMG400030315 Solanum tuberosum HOM05D006284 ORTHO05D007793 1.2e-66 256.5 135 88.1
CAN.G394.47 Capsicum annuum HOM05D006284 ORTHO05D007793 5.7e-66 254.2 135 87.4
Peaxi162Scf00679g00212 Petunia axillaris HOM05D006284 ORTHO05D007793 1.8e-64 249.2 139 84.2
QL01p032751 Quercus lobata HOM05D006284 ORTHO05D007793 4.2e-61 238.0 137 78.8
CiPaw.13G097000 Carya illinoinensis HOM05D006284 ORTHO05D007793 2.0e-58 229.2 137 77.4
EL10Ac7g15985 Beta vulgaris HOM05D006284 ORTHO05D007793 2.6e-58 228.8 137 75.2
Atru.chr3.3846 Acer truncatum HOM05D006284 ORTHO05D007793 7.5e-58 227.3 137 77.4
MSTRG.15272 Avicennia marina HOM05D006284 ORTHO05D007793 1.7e-57 226.1 135 79.3
Migut.L00518 Erythranthe guttata HOM05D006284 ORTHO05D007793 1.7e-57 226.1 139 76.3
Haze_24061 Corylus avellana HOM05D006284 ORTHO05D007793 4.9e-57 224.6 137 75.2
FAN11G1150 Fragaria x ananassa HOM05D006284 ORTHO05D007793 6.3e-57 224.2 136 76.5
FAN21G0749 Fragaria x ananassa HOM05D006284 ORTHO05D007793 6.3e-57 224.2 136 76.5
MD11G1144900 Malus domestica HOM05D006284 ORTHO05D007793 1.8e-56 222.6 137 73.7
Ca_19180_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 3.1e-56 221.9 136 74.3
Ca_31183_v3 Cicer arietinum L. HOM05D006284 ORTHO05D007793 3.1e-56 221.9 136 74.3
Lalb_Chr01g0003741 Lupinus albus HOM05D006284 ORTHO05D007793 3.1e-56 221.9 137 76.6
FAN16G2200 Fragaria x ananassa HOM05D006284 ORTHO05D007793 5.4e-56 221.1 136 75.7
Potri.001G237500 Populus trichocarpa HOM05D006284 ORTHO05D007793 5.4e-56 221.1 135 73.3
Prupe.6G080800 Prunus persica HOM05D006284 ORTHO05D007793 5.4e-56 221.1 135 74.8
Thhalv10009069m.g Eutrema salsugineum HOM05D006284 ORTHO05D007793 7.0e-56 220.7 136 75.7
Sed0023805 Sechium edule HOM05D006284 ORTHO05D007793 7.0e-56 220.7 140 74.3
GSVIVG01025000001 Vitis vinifera HOM05D006284 ORTHO05D007793 7.0e-56 220.7 137 74.5
BcaC07g42493 Brassica carinata HOM05D006284 ORTHO05D007793 2.0e-55 219.2 136 75.0
HanXRQChr15g0493271 Helianthus annuus HOM05D006284 ORTHO05D007793 2.7e-55 218.8 139 73.4
Cpa.g.sc190.6 Carica papaya HOM05D006284 ORTHO05D007793 3.5e-55 218.4 137 73.7
Rhsim01G0226200 Rhododendron simsii HOM05D006284 ORTHO05D007793 3.5e-55 218.4 135 75.6
Dinv03613 Davidia involucrata HOM05D006284 ORTHO05D007793 5.9e-55 217.6 135 74.8
A09p66230 Brassica napus HOM05D006284 ORTHO05D007793 7.7e-55 217.2 136 75.0
ClCG02G020310 Citrullus lanatus HOM05D006284 ORTHO05D007793 7.7e-55 217.2 139 71.9
TAR623G0100 Trochodendron aralioides HOM05D006284 ORTHO05D007793 7.7e-55 217.2 136 75.7
Medtr4g063500 Medicago truncatula HOM05D006284 ORTHO05D007793 1.0e-54 216.9 137 72.3
Aa31sc281G30 Aethionema arabicum HOM05D006284 ORTHO05D007793 1.3e-54 216.5 135 73.3
Carub.0001s0699 Capsella rubella HOM05D006284 ORTHO05D007793 1.3e-54 216.5 136 74.3
AUR62009602 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.3e-54 216.5 137 71.5
Migut.L00567 Erythranthe guttata HOM05D006284 ORTHO05D007793 1.3e-54 216.5 128 78.1
Sp1g06380 Schrenkiella parvula HOM05D006284 ORTHO05D007793 1.3e-54 216.5 136 74.3
Glyma.12G064500 Glycine max HOM05D006284 ORTHO05D007793 1.7e-54 216.1 137 72.3
RcHm_v2.0_Chr5g0063801 Rosa chinensis HOM05D006284 ORTHO05D007793 1.7e-54 216.1 136 75.0
vmacro14530 Vaccinium macrocarpon HOM05D006284 ORTHO05D007793 1.7e-54 216.1 135 74.1
VMungo1127G1430 Vigna mungo HOM05D006284 ORTHO05D007793 1.7e-54 216.1 137 70.8
DCAR_015613 Daucus carota HOM05D006284 ORTHO05D007793 2.3e-54 215.7 134 73.9
BraA09t41961Z Brassica rapa HOM05D006284 ORTHO05D007793 2.9e-54 215.3 136 74.3
Oeu056746.1 Olea europaea HOM05D006284 ORTHO05D007793 2.9e-54 215.3 136 71.3
Sabra16G0143200 Salix brachista HOM05D006284 ORTHO05D007793 2.9e-54 215.3 135 74.1
SalBow5G5166 Salvia bowleyana HOM05D006284 ORTHO05D007793 2.9e-54 215.3 135 77.0
Phvul.011G065500 Phaseolus vulgaris HOM05D006284 ORTHO05D007793 3.8e-54 214.9 137 71.5
Aqoxy4G02964 Aquilegia oxysepala HOM05D006284 ORTHO05D007793 5.0e-54 214.5 134 71.6
A06p04820 Brassica napus HOM05D006284 ORTHO05D007793 5.0e-54 214.5 137 74.5
BraA06t23686Z Brassica rapa HOM05D006284 ORTHO05D007793 5.0e-54 214.5 137 74.5
Psat7g217680 Pisum sativum HOM05D006284 ORTHO05D007793 5.0e-54 214.5 136 72.8
Sc06g0008270 Simmondsia chinensis HOM05D006284 ORTHO05D007793 5.0e-54 214.5 131 71.8
BcaC07g41981 Brassica carinata HOM05D006284 ORTHO05D007793 6.6e-54 214.2 136 74.3
BcaC07g42491 Brassica carinata HOM05D006284 ORTHO05D007793 6.6e-54 214.2 136 74.3
C08p50410 Brassica napus HOM05D006284 ORTHO05D007793 6.6e-54 214.2 136 74.3
BolC8t52569H Brassica oleracea HOM05D006284 ORTHO05D007793 6.6e-54 214.2 136 74.3
PGR102G0171 Punica granatum HOM05D006284 ORTHO05D007793 6.6e-54 214.2 137 72.3
AL1G17850 Arabidopsis lyrata HOM05D006284 ORTHO05D007793 8.6e-54 213.8 136 72.8
arahy.Tifrunner.gnm1.ann1.W3SBYC Arachis hypogaea HOM05D006284 ORTHO05D007793 8.6e-54 213.8 137 72.3
Oeu041449.2 Olea europaea HOM05D006284 ORTHO05D007793 8.6e-54 213.8 136 71.3
Duzib168G1259 Durio zibethinus HOM05D006284 ORTHO05D007793 1.1e-53 213.4 138 73.9
AUR62001816 Chenopodium quinoa HOM05D006284 ORTHO05D007793 1.5e-53 213.0 132 72.7
AT1G07645 Arabidopsis thaliana HOM05D006284 ORTHO05D007793 1.9e-53 212.6 136 72.8
C05p05670 Brassica napus HOM05D006284 ORTHO05D007793 1.9e-53 212.6 137 74.5
BolC5t29337H Brassica oleracea HOM05D006284 ORTHO05D007793 1.9e-53 212.6 137 74.5
Hma1.2p1_1897F.1_g306861 Hydrangea macrophylla HOM05D006284 ORTHO05D007793 3.3e-53 211.8 129 76.0
Thecc.09G324900 Theobroma cacao HOM05D006284 ORTHO05D007793 3.3e-53 211.8 137 73.7
arahy.Tifrunner.gnm1.ann1.6H51DS Arachis hypogaea HOM05D006284 ORTHO05D007793 5.6e-53 211.1 137 71.5
ECA247G3393 Erigeron canadensis HOM05D006284 ORTHO05D007793 5.6e-53 211.1 139 69.8
MELO3C013690.2 Cucumis melo HOM05D006284 ORTHO05D007793 7.2e-53 210.7 139 69.1
Lsat_1_v5_gn_5_183840 Lactuca sativa HOM05D006284 ORTHO05D007793 7.2e-53 210.7 139 71.9
Os03g0277500 Oryza sativa ssp. japonica HOM05D006284 ORTHO05D007793 9.5e-53 210.3 129 75.2
Lj3g0026697 Lotus japonicus HOM05D006284 ORTHO05D007793 1.2e-52 209.9 135 72.6
PSO339G4936 Papaver somniferum HOM05D006284 ORTHO05D007793 2.8e-52 208.8 135 72.6
CsaV3_6G017010 Cucumis sativus L. HOM05D006284 ORTHO05D007793 4.7e-52 208.0 139 69.1
Actinidia33860 Actinidia chinensis HOM05D006284 ORTHO05D007793 6.1e-52 207.6 129 75.2
CANSAT54G2008 Cannabis sativa HOM05D006284 ORTHO05D007793 8.0e-52 207.2 136 69.9
COL.COLO4_18479 Corchorus olitorius HOM05D006284 ORTHO05D007793 1.0e-51 206.8 137 70.8
Manes.11G132300 Manihot esculenta HOM05D006284 ORTHO05D007793 1.8e-51 206.1 133 69.9
BcaC07g42490 Brassica carinata HOM05D006284 ORTHO05D007793 2.3e-51 205.7 137 73.0
THA.LOC104800652 Tarenaya hassleriana HOM05D006284 ORTHO05D007793 2.3e-51 205.7 136 72.8
Eucgr.B02382 Eucalyptus grandis HOM05D006284 ORTHO05D007793 4.0e-51 204.9 129 74.4
CARHR007450 Cardamine hirsuta HOM05D006284 ORTHO05D007793 5.2e-51 204.5 129 71.3
Gorai.009G100800 Gossypium raimondii HOM05D006284 ORTHO05D007793 5.2e-51 204.5 136 71.3
PSO384G0339 Papaver somniferum HOM05D006284 ORTHO05D007793 1.2e-50 203.4 135 71.1
Gohir.A05G097100 Gossypium hirsutum HOM05D006284 ORTHO05D007793 1.5e-50 203.0 136 70.6
Lsat_1_v5_gn_9_22581 Lactuca sativa HOM05D006284 ORTHO05D007793 2.0e-50 202.6 135 70.4
Gohir.D05G097250 Gossypium hirsutum HOM05D006284 ORTHO05D007793 7.0e-48 194.1 130 69.2
SGA_v2.0_scaffold606G53170 Striga asiatica HOM05D006284 ORTHO05D007793 1.7e-46 189.5 129 69.8
SHI00991 Sapria himalayana HOM05D006284 ORTHO05D007793 3.0e-46 188.7 136 65.4
Zm00001eb012550 Zea mays HOM05D006284 ORTHO05D007793 4.3e-45 184.9 130 66.9
TWI79G0071 Tripterygium wilfordii HOM05D006284 ORTHO05D007793 1.6e-44 183.0 137 65.7
Gohir.A07G096400 Gossypium hirsutum HOM05D006284 ORTHO05D007793 4.9e-41 171.4 159 56.6
Ciclev10029580m.g Citrus clementina HOM05D006284 ORTHO05D007793 1.9e-40 169.5 114 71.1
SMO165G0091 Selaginella moellendorffii HOM05D006284 ORTHO05D007793 1.6e-39 166.4 130 59.2
MBI14_g11686_MAGBIO Magnolia biondii HOM05D006284 ORTHO05D007793 4.6e-39 164.9 95 75.8
FvH4_3g35580 Fragaria vesca HOM05D006284 ORTHO05D007793 2.3e-38 162.5 136 64.0
Mapoly0004s0146 Marchantia polymorpha HOM05D006284 ORTHO05D007793 1.1e-37 160.2 127 60.6
Oeu033642.1 Olea europaea HOM05D006284 ORTHO05D007793 2.1e-36 156.0 103 68.9
Lj2A1058T40 Lonicera japonica HOM05D006284 ORTHO05D007793 8.1e-36 154.1 94 72.3
Gorai.001G108700 Gossypium raimondii HOM05D006284 ORTHO05D007793 3.1e-35 152.1 131 61.1
Oeu056758.1 Olea europaea HOM05D006284 ORTHO05D007793 4.4e-34 148.3 96 69.8
Gohir.D07G100800 Gossypium hirsutum HOM05D006284 ORTHO05D007793 7.5e-34 147.5 157 52.9
CSS0000036 Camellia sinensis var. sinensis HOM05D006284 ORTHO05D007793 4.9e-33 144.8 135 57.8
DCAR_018897 Daucus carota HOM05D006284 ORTHO05D007793 1.4e-32 143.3 94 68.1
TPR.G10205 Trifolium pratense HOM05D006284 ORTHO05D007793 2.4e-32 142.5 101 68.3
FAN11G3292 Fragaria x ananassa HOM05D006284 ORTHO05D007793 7.8e-31 137.5 136 55.9
Oeu056743.1 Olea europaea HOM05D006284 ORTHO05D007793 1.3e-30 136.7 91 64.8
Oeu056739.1 Olea europaea HOM05D006284 ORTHO05D007793 5.1e-30 134.8 136 52.2
Peaxi162Scf00406g00314 Petunia axillaris HOM05D006284 ORTHO05D007793 5.8e-26 121.3 136 50.7
SEGI_15500 Sequoiadendron giganteum HOM05D006284 ORTHO05D007793 6.6e-22 107.8 96 57.3
AagrBONN_evm.TU.Sc2ySwM_117.384 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.1e-21 107.1 135 42.2
AagrBONN_evm.TU.Sc2ySwM_344.4820 Anthoceros agrestis HOM05D006284 ORTHO05D007793 1.4e-19 100.1 95 51.6
MD07G1053700 Malus domestica HOM05D006284 ORTHO05D007793 5.8e-18 94.7 62 67.7
AagrBONN_evm.TU.Sc2ySwM_344.4822 Anthoceros agrestis HOM05D018382 ORTHO05D001873 1.3e-17 93.6 117 41.9
FvH4_3g35610 Fragaria vesca HOM05D006284 ORTHO05D007793 2.2e-17 92.8 136 41.9
CANSAT21G1079 Cannabis sativa HOM05D002411 ORTHO05D002564 3.8e-17 92.0 60 68.3
Pp3c19_1590 Physcomitrium patens HOM05D006284 ORTHO05D007793 4.9e-17 91.7 130 37.7
MD14G1025700 Malus domestica HOM05D006284 ORTHO05D007793 6.4e-17 91.3 62 64.5
TPR.G10968 Trifolium pratense HOM05D006284 ORTHO05D007793 3.6e-12 75.5 41 78.0
Cc01_g12610 Coffea canephora HOM05D006284 ORTHO05D007793 3.1e-11 72.4 42 76.2
Ah.08g219180 Amaranthus hybridus HOM05D006284 ORTHO05D007793 1.9e-08 63.2 42 76.2
ATR0559G308 Amborella trichopoda HOM05D006284 ORTHO05D007793 4.2e-08 62.0 37 73.0
Cc01_g12620 Coffea canephora HOM05D006284 ORTHO05D007793 3.9e-06 55.5 32 71.9


User provided reference genes

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