Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001837g0050 Nicotiana tabacum HOM05D005866 ORTHO05D007078 4.2e-94 348.6 262 100.0
Nitab4.5_0000008g0810 Nicotiana tabacum HOM05D005866 ORTHO05D007078 1.8e-89 333.2 262 96.6
Peaxi162Scf00141g00718 Petunia axillaris HOM05D005866 ORTHO05D007078 1.4e-73 280.4 262 80.5
CAN.G338.58 Capsicum annuum HOM05D005866 ORTHO05D007078 1.7e-71 273.5 263 84.4
PGSC0003DMG400020319 Solanum tuberosum HOM05D005866 ORTHO05D007078 2.9e-71 272.7 263 82.1
Solyc09g014215.2 Solanum lycopersicum HOM05D005866 ORTHO05D007078 4.2e-70 268.9 266 84.2
Sopen09g007090 Solanum pennellii HOM05D005866 ORTHO05D007078 4.8e-66 255.4 256 78.1
Sopen10g034540 Solanum pennellii HOM05D005866 ORTHO05D007078 6.6e-55 218.4 264 63.6
PGSC0003DMG400011090 Solanum tuberosum HOM05D005866 ORTHO05D007078 4.2e-54 215.7 264 62.9
Nitab4.5_0004912g0060 Nicotiana tabacum HOM05D005866 ORTHO05D007078 6.8e-52 208.4 210 74.8
TAR623G0986 Trochodendron aralioides HOM05D005866 ORTHO05D007078 3.4e-51 206.1 254 65.4
Solyc10g085080.3 Solanum lycopersicum HOM05D005866 ORTHO05D007078 8.3e-50 201.4 279 58.8
Dinv14530 Davidia involucrata HOM05D005866 ORTHO05D007078 2.4e-49 199.9 262 58.0
Dinv35509 Davidia involucrata HOM05D005866 ORTHO05D007078 9.2e-49 198.0 262 57.6
Cc06_g01630 Coffea canephora HOM05D005866 ORTHO05D007078 2.7e-48 196.4 260 66.2
GSVIVG01034004001 Vitis vinifera HOM05D000012 ORTHO05D000567 1.0e-47 194.5 264 61.4
CSS0007949 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 1.7e-47 193.7 261 61.3
CSS0025068 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 1.7e-47 193.7 261 61.3
Thecc.05G021700 Theobroma cacao HOM05D005866 ORTHO05D007078 5.0e-47 192.2 262 59.5
CiPaw.09G206400 Carya illinoinensis HOM05D005866 ORTHO05D007078 2.5e-46 189.9 251 51.8
CAN.G1297.4 Capsicum annuum HOM05D005866 ORTHO05D007078 3.3e-46 189.5 263 58.6
Manes.09G102400 Manihot esculenta HOM05D005866 ORTHO05D007078 4.7e-45 185.7 262 59.2
Duzib128G1899 Durio zibethinus HOM05D005866 ORTHO05D007078 6.1e-45 185.3 254 59.8
vmacro08602 Vaccinium macrocarpon HOM05D005866 ORTHO05D007078 8.0e-45 184.9 261 54.0
THA.LOC104816219 Tarenaya hassleriana HOM05D005866 ORTHO05D007078 1.4e-44 184.1 254 65.0
Ciclev10012537m.g Citrus clementina HOM05D005866 ORTHO05D007078 6.8e-44 181.8 262 62.6
Eucgr.B02792 Eucalyptus grandis HOM05D005866 ORTHO05D007078 2.6e-43 179.9 267 61.8
CANSAT35G0638 Cannabis sativa HOM05D005866 ORTHO05D007078 3.4e-43 179.5 262 64.1
Cpa.g.sc56.117 Carica papaya HOM05D005866 ORTHO05D007078 9.8e-43 177.9 262 59.2
Gohir.A01G225500 Gossypium hirsutum HOM05D005866 ORTHO05D007078 1.3e-42 177.6 254 62.2
Sabra06G0074300 Salix brachista HOM05D005866 ORTHO05D007078 1.3e-42 177.6 261 52.1
Peaxi162Scf00009g01923 Petunia axillaris HOM05D005866 ORTHO05D007078 1.7e-42 177.2 248 64.5
Potri.006G096700 Populus trichocarpa HOM05D005866 ORTHO05D007078 1.7e-42 177.2 260 43.1
MSTRG.5595 Avicennia marina HOM05D005866 ORTHO05D007078 4.9e-42 175.6 259 62.9
Nitab4.5_0000652g0170 Nicotiana tabacum HOM05D005866 ORTHO05D007078 8.3e-42 174.9 232 61.2
Gorai.002G261300 Gossypium raimondii HOM05D005866 ORTHO05D007078 2.4e-41 173.3 254 67.7
Lj2C80T14 Lonicera japonica HOM05D005866 ORTHO05D007078 3.2e-41 172.9 265 44.5
Haze_20956 Corylus avellana HOM05D005866 ORTHO05D007078 5.4e-41 172.2 262 54.6
Gohir.D01G215200 Gossypium hirsutum HOM05D005866 ORTHO05D007078 7.0e-41 171.8 254 48.8
unitig_578.g15896 Utricularia gibba HOM05D005866 ORTHO05D007078 7.0e-41 171.8 257 52.5
Carub.0003s0821 Capsella rubella HOM05D005866 ORTHO05D007078 1.2e-40 171.0 252 52.4
PSO384G0902 Papaver somniferum HOM05D005866 ORTHO05D007078 1.6e-40 170.6 259 62.2
Sc01g0006840 Simmondsia chinensis HOM05D005866 ORTHO05D007078 2.7e-40 169.9 262 56.1
Migut.J00221 Erythranthe guttata HOM05D005866 ORTHO05D007078 3.5e-40 169.5 262 69.5
ECA247G0127 Erigeron canadensis HOM05D005866 ORTHO05D007078 4.6e-40 169.1 267 44.9
Prupe.6G271100 Prunus persica HOM05D000012 ORTHO05D000567 4.6e-40 169.1 262 49.6
AL3G20110 Arabidopsis lyrata HOM05D005866 ORTHO05D007078 1.0e-39 167.9 252 56.0
A05p39790 Brassica napus HOM05D005866 ORTHO05D007078 1.0e-39 167.9 257 56.8
BraA05t22763Z Brassica rapa HOM05D005866 ORTHO05D007078 1.0e-39 167.9 257 56.8
AT3G09050 Arabidopsis thaliana HOM05D005866 ORTHO05D007078 1.7e-39 167.2 257 56.0
C05p58830 Brassica napus HOM05D005866 ORTHO05D007078 3.0e-39 166.4 257 56.8
Thhalv10021354m.g Eutrema salsugineum HOM05D005866 ORTHO05D007078 3.9e-39 166.0 257 54.9
Aa31LG3G1580 Aethionema arabicum HOM05D005866 ORTHO05D007078 6.6e-39 165.2 260 43.8
BcaC05g29639 Brassica carinata HOM05D005866 ORTHO05D007078 6.6e-39 165.2 257 56.8
PGR031G2542 Punica granatum HOM05D005866 ORTHO05D007078 6.6e-39 165.2 260 60.0
MD04G1147400 Malus domestica HOM05D005866 ORTHO05D007078 1.5e-38 164.1 262 43.5
DCAR_015452 Daucus carota HOM05D005866 ORTHO05D007078 1.9e-38 163.7 266 56.0
Sp3g07500 Schrenkiella parvula HOM05D005866 ORTHO05D007078 3.3e-38 162.9 257 55.3
BolC5t34535H Brassica oleracea HOM05D005866 ORTHO05D007078 4.3e-38 162.5 257 56.0
FAN05G0379 Fragaria x ananassa HOM05D000012 ORTHO05D000567 4.3e-38 162.5 262 53.1
COL.COLO4_14593 Corchorus olitorius HOM05D005866 ORTHO05D007078 5.6e-38 162.2 256 60.2
Nn2g11373 Nelumbo nucifera HOM05D005866 ORTHO05D007078 9.5e-38 161.4 243 56.4
TWI74G1551 Tripterygium wilfordii HOM05D005866 ORTHO05D007078 1.2e-37 161.0 262 53.1
CARHR083410 Cardamine hirsuta HOM05D005866 ORTHO05D007078 1.6e-37 160.6 258 54.3
FvH4_6g11980 Fragaria vesca HOM05D005866 ORTHO05D007078 1.6e-37 160.6 262 47.7
Glyma.07G145800 Glycine max HOM05D005866 ORTHO05D007078 2.1e-37 160.2 262 42.7
Phvul.008G107300 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 2.1e-37 160.2 263 46.0
VMungo1383G0141 Vigna mungo HOM05D005866 ORTHO05D007078 2.1e-37 160.2 262 43.9
FAN14G3397 Fragaria x ananassa HOM05D000012 ORTHO05D000567 3.6e-37 159.5 262 47.3
Glyma.18G197300 Glycine max HOM05D005866 ORTHO05D007078 3.6e-37 159.5 252 40.9
AUR62042946 Chenopodium quinoa HOM05D005866 ORTHO05D007078 6.2e-37 158.7 209 46.4
FAN02G1355 Fragaria x ananassa HOM05D005866 ORTHO05D007078 6.2e-37 158.7 262 47.3
FAN09G2814 Fragaria x ananassa HOM05D000012 ORTHO05D007078 8.0e-37 158.3 262 43.9
Aqoxy1G00701 Aquilegia oxysepala HOM05D005866 ORTHO05D007078 1.4e-36 157.5 241 43.2
FAN14G3518 Fragaria x ananassa HOM05D005866 ORTHO05D007078 1.4e-36 157.5 263 40.7
BcaC09g48050 Brassica carinata HOM05D005866 ORTHO05D007078 3.1e-36 156.4 256 51.6
BraA01t04319Z Brassica rapa HOM05D005866 ORTHO05D007078 2.0e-35 153.7 256 43.8
ClCG04G007220 Citrullus lanatus HOM05D005866 ORTHO05D007078 3.4e-35 152.9 210 55.7
Lj1g0011685 Lotus japonicus HOM05D005866 ORTHO05D007078 4.4e-35 152.5 265 40.4
Ah.12g060060 Amaranthus hybridus HOM05D005866 ORTHO05D007078 1.3e-34 151.0 202 60.9
CsaV3_4G026010 Cucumis sativus L. HOM05D005866 ORTHO05D007078 1.7e-34 150.6 232 46.1
arahy.Tifrunner.gnm1.ann1.Q1H550 Arachis hypogaea HOM05D005866 ORTHO05D007078 3.7e-34 149.4 260 40.8
AUR62025814 Chenopodium quinoa HOM05D005866 ORTHO05D007078 3.7e-34 149.4 210 45.7
Sed0005881 Sechium edule HOM05D005866 ORTHO05D007078 3.7e-34 149.4 261 47.9
Lsat_1_v5_gn_9_36061 Lactuca sativa HOM05D005866 ORTHO05D007078 4.9e-34 149.1 210 52.9
Lj3g0009346 Lotus japonicus HOM05D005866 ORTHO05D007078 6.4e-34 148.7 244 40.2
TPR.G1580 Trifolium pratense HOM05D005866 ORTHO05D007078 1.1e-33 147.9 266 39.5
Actinidia05342 Actinidia chinensis HOM05D005866 ORTHO05D007078 1.9e-33 147.1 195 68.2
BolC1t05477H Brassica oleracea HOM05D005866 ORTHO05D007078 2.4e-33 146.7 256 50.0
MELO3C003227.2 Cucumis melo HOM05D005866 ORTHO05D007078 4.1e-33 146.0 210 54.3
BcaC09g48005 Brassica carinata HOM05D005866 ORTHO05D007078 7.1e-33 145.2 207 56.5
Atru.chr8.2203 Acer truncatum HOM05D005866 ORTHO05D007078 1.2e-32 144.4 280 41.8
Medtr7g067000 Medicago truncatula HOM05D005866 ORTHO05D007078 1.6e-32 144.1 263 39.2
Psat3g131120 Pisum sativum HOM05D005866 ORTHO05D007078 1.6e-32 144.1 263 39.5
arahy.Tifrunner.gnm1.ann1.LP8IIZ Arachis hypogaea HOM05D005866 ORTHO05D007078 2.7e-32 143.3 260 40.0
PSO339G5866 Papaver somniferum HOM05D005866 ORTHO05D007078 3.5e-32 142.9 195 71.3
Ca_07614_v3 Cicer arietinum L. HOM05D005866 ORTHO05D007078 6.0e-32 142.1 263 39.5
Glyma.03G077300 Glycine max HOM05D005866 ORTHO05D007078 6.0e-32 142.1 247 61.9
BcaC09g48006 Brassica carinata HOM05D005866 ORTHO05D007078 1.3e-31 141.0 207 44.4
SGA_v2.0_scaffold85G26760 Striga asiatica HOM05D005866 ORTHO05D007078 1.3e-31 141.0 121 63.6
VMungo0331G1214 Vigna mungo HOM05D005866 ORTHO05D007078 1.9e-30 137.1 245 50.6
Psat7g247600 Pisum sativum HOM05D005866 ORTHO05D007078 5.6e-30 135.6 262 38.2
TAR633G2503 Trochodendron aralioides HOM05D005866 ORTHO05D007078 9.5e-30 134.8 123 61.0
Medtr4g015010 Medicago truncatula HOM05D005866 ORTHO05D007078 1.2e-29 134.4 254 47.6
Phvul.010G008600 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 8.1e-29 131.7 247 50.2
Lalb_Chr07g0193301 Lupinus albus HOM05D005866 ORTHO05D007078 4.0e-28 129.4 193 42.5
Lj2P1203T18 Lonicera japonica HOM05D005866 ORTHO05D007078 8.9e-28 128.3 127 56.7
Zm00001eb367320 Zea mays HOM05D005866 ORTHO05D007078 3.4e-27 126.3 210 49.0
ECA247G1841 Erigeron canadensis HOM05D005866 ORTHO05D007078 4.4e-27 125.9 213 45.5
arahy.Tifrunner.gnm1.ann1.QNAF0W Arachis hypogaea HOM05D005866 ORTHO05D007078 7.6e-27 125.2 260 37.3
CDE03G0505 Ceratophyllum demersum HOM05D005866 ORTHO05D007078 7.6e-27 125.2 255 45.1
Hund02698 Selenicereus undatus HOM05D005866 ORTHO05D007078 7.6e-27 125.2 251 35.5
EL10Ac6g13875 Beta vulgaris HOM05D005866 ORTHO05D007078 1.3e-26 124.4 122 55.7
arahy.Tifrunner.gnm1.ann1.F83RTD Arachis hypogaea HOM05D005866 ORTHO05D007078 1.7e-26 124.0 253 36.8
arahy.Tifrunner.gnm1.ann1.T33YJ3 Arachis hypogaea HOM05D005866 ORTHO05D007078 1.7e-26 124.0 253 36.8
RcHm_v2.0_Chr3g0463811 Rosa chinensis HOM05D005866 ORTHO05D007078 1.1e-25 121.3 124 54.8
TPR.G5230 Trifolium pratense HOM05D005866 ORTHO05D007078 2.4e-25 120.2 242 46.3
Os01g0853000 Oryza sativa ssp. japonica HOM05D005866 ORTHO05D007078 3.2e-25 119.8 212 49.1
arahy.Tifrunner.gnm1.ann1.6JA19R Arachis hypogaea HOM05D005866 ORTHO05D007078 8.6e-23 111.7 220 37.3
Actinidia01118 Actinidia chinensis HOM05D005866 ORTHO05D007078 6.8e-20 102.1 81 67.9
ATR0618G104 Amborella trichopoda HOM05D005866 ORTHO05D007078 2.9e-18 96.7 127 42.5
Dinv37082 Davidia involucrata HOM05D005866 ORTHO05D007078 9.6e-14 81.6 72 61.1
Actinidia01119 Actinidia chinensis HOM05D005866 ORTHO05D007078 1.6e-13 80.9 87 50.6
Ah.07g199780 Amaranthus hybridus HOM05D005866 ORTHO05D007078 2.9e-10 70.1 80 52.5
SEGI_33363 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 7.1e-09 65.5 201 27.4
ATR0618G115 Amborella trichopoda HOM05D005866 ORTHO05D007078 2.1e-08 63.9 78 46.2
AagrBONN_evm.TU.Sc2ySwM_117.2545 Anthoceros agrestis HOM05D005866 ORTHO05D007078 3.5e-08 63.2 213 25.4
Pp3c5_19930 Physcomitrium patens HOM05D005866 ORTHO05D007078 7.8e-08 62.0 203 25.1
SGA_v2.0_scaffold1443G53951 Striga asiatica HOM05D005866 ORTHO05D007078 7.8e-08 62.0 86 46.5
HanXRQChr10g0287001 Helianthus annuus HOM05D005866 ORTHO05D007078 1.0e-07 61.6 91 40.7
Lalb_Chr03g0043011 Lupinus albus HOM05D005866 ORTHO05D007078 1.0e-07 61.6 85 43.5
SEGI_17473 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 1.9e-06 57.4 180 27.2


User provided reference genes

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