Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001827g0140 Nicotiana tabacum HOM05D000891 ORTHO05D000761 6.7e-96 354.0 176 100.0
Solyc02g085650.4 Solanum lycopersicum HOM05D001985 ORTHO05D000761 1.2e-57 226.9 263 50.2
Nitab4.5_0000310g0140 Nicotiana tabacum HOM05D000891 ORTHO05D000761 2.3e-56 222.6 257 52.1
Nitab4.5_0013032g0040 Nicotiana tabacum HOM05D000891 ORTHO05D000761 8.9e-56 220.7 257 52.1
Sopen02g030320 Solanum pennellii HOM05D000891 ORTHO05D000761 3.7e-46 188.7 263 45.6
PGSC0003DMG400040010 Solanum tuberosum HOM05D000891 ORTHO05D000761 4.3e-42 175.3 256 44.9
CiPaw.01G035200 Carya illinoinensis HOM05D000891 ORTHO05D000761 2.1e-41 172.9 257 39.7
Peaxi162Scf00515g00029 Petunia axillaris HOM05D000891 ORTHO05D000761 2.3e-40 169.5 257 42.0
Dinv26815 Davidia involucrata HOM05D000891 ORTHO05D000761 4.4e-39 165.2 257 38.9
MELO3C017551.2 Cucumis melo HOM05D000891 ORTHO05D000761 3.7e-38 162.2 257 36.6
Haze_15114 Corylus avellana HOM05D000891 ORTHO05D000761 1.1e-37 160.6 257 38.1
MSTRG.23543 Avicennia marina HOM05D000891 ORTHO05D000761 4.1e-37 158.7 259 35.9
PGSC0003DMG400015467 Solanum tuberosum HOM05D000891 ORTHO05D000761 4.1e-37 158.7 120 64.2
Atru.chr3.547 Acer truncatum HOM05D000891 ORTHO05D000761 1.2e-36 157.1 257 37.4
CAN.G53.43 Capsicum annuum HOM05D000891 ORTHO05D000761 1.2e-36 157.1 120 63.3
COL.COLO4_22110 Corchorus olitorius HOM05D000891 ORTHO05D000761 1.6e-36 156.8 258 36.0
ECA238G4369 Erigeron canadensis HOM05D000891 ORTHO05D000761 2.1e-36 156.4 263 36.1
Lj2P449T26 Lonicera japonica HOM05D000891 ORTHO05D000761 3.5e-36 155.6 257 37.7
Sopen02g013930 Solanum pennellii HOM05D000891 ORTHO05D000761 3.5e-36 155.6 120 63.3
AUR62003179 Chenopodium quinoa HOM05D001563 ORTHO05D001956 4.6e-36 155.2 257 36.2
Gohir.D12G065400 Gossypium hirsutum HOM05D000891 ORTHO05D000761 1.0e-35 154.1 258 36.8
Gorai.008G068700 Gossypium raimondii HOM05D000891 ORTHO05D000761 1.0e-35 154.1 258 36.8
Prupe.7G151800 Prunus persica HOM05D000891 ORTHO05D000761 1.0e-35 154.1 255 35.7
Solyc02g062910.3 Solanum lycopersicum HOM05D000891 ORTHO05D000761 1.0e-35 154.1 120 62.5
Gohir.A12G065300 Gossypium hirsutum HOM05D000891 ORTHO05D000761 1.7e-35 153.3 256 37.1
Thecc.01G038900 Theobroma cacao HOM05D000891 ORTHO05D000761 1.7e-35 153.3 258 37.2
Nitab4.5_0003410g0050 Nicotiana tabacum HOM05D000891 ORTHO05D000761 3.0e-35 152.5 120 60.0
Sp7g34340 Schrenkiella parvula HOM05D000891 ORTHO05D000761 3.0e-35 152.5 258 34.5
CARHR245040 Cardamine hirsuta HOM05D000891 ORTHO05D000761 3.9e-35 152.1 258 34.9
Sed0016696 Sechium edule HOM05D000891 ORTHO05D000761 5.1e-35 151.8 251 37.5
CANSAT01G1424 Cannabis sativa HOM05D000891 ORTHO05D000761 6.6e-35 151.4 257 36.6
ClCG07G009040 Citrullus lanatus HOM05D000891 ORTHO05D000761 6.6e-35 151.4 257 35.8
Lsat_1_v5_gn_2_76721 Lactuca sativa HOM05D000891 ORTHO05D000761 6.6e-35 151.4 255 34.9
Duzib264G1293 Durio zibethinus HOM05D000891 ORTHO05D000761 8.6e-35 151.0 258 36.0
HanXRQChr14g0440391 Helianthus annuus HOM05D000891 ORTHO05D000761 8.6e-35 151.0 255 36.9
MD02G1151200 Malus domestica HOM05D000891 ORTHO05D000761 8.6e-35 151.0 255 36.9
AL7G14330 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 1.1e-34 150.6 258 33.7
MD15G1265700 Malus domestica HOM05D000891 ORTHO05D000761 1.1e-34 150.6 255 34.9
Oeu014918.1 Olea europaea HOM05D000891 ORTHO05D000761 1.1e-34 150.6 258 36.8
Aa31LG6G13480 Aethionema arabicum HOM05D000891 ORTHO05D000761 1.5e-34 150.2 251 35.5
Duzib147G0693 Durio zibethinus HOM05D000891 ORTHO05D000761 1.5e-34 150.2 258 35.7
Cc07_g09260 Coffea canephora HOM05D000891 ORTHO05D000761 1.9e-34 149.8 122 60.7
CSS0037549 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 2.5e-34 149.4 253 38.7
Cpa.g.sc353.5 Carica papaya HOM05D000891 ORTHO05D000761 2.5e-34 149.4 257 38.1
AT4G36680 Arabidopsis thaliana HOM05D000891 ORTHO05D000761 3.3e-34 149.1 258 34.1
CARHR109130 Cardamine hirsuta HOM05D000891 ORTHO05D000761 4.3e-34 148.7 257 35.0
CsaV3_4G005170 Cucumis sativus L. HOM05D000891 ORTHO05D000761 4.3e-34 148.7 257 35.0
TWI09G1082 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 5.6e-34 148.3 263 35.4
DCAR_017247 Daucus carota HOM05D000891 ORTHO05D000761 7.3e-34 147.9 257 35.4
Thhalv10027579m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 7.3e-34 147.9 258 33.7
Migut.H00180 Erythranthe guttata HOM05D000891 ORTHO05D000761 9.5e-34 147.5 259 36.3
Nitab4.5_0000628g0030 Nicotiana tabacum HOM05D000891 ORTHO05D000761 1.2e-33 147.1 120 57.5
QL06p045511 Quercus lobata HOM05D000891 ORTHO05D000761 1.6e-33 146.7 265 35.8
Sopen02g030210 Solanum pennellii HOM05D004651 ORTHO05D005761 2.1e-33 146.4 195 45.6
AL3G51870 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 3.6e-33 145.6 252 34.1
Sabra05G0103000 Salix brachista HOM05D000891 ORTHO05D000761 4.7e-33 145.2 257 34.6
EL10Ac6g14919 Beta vulgaris HOM05D000891 ORTHO05D000761 6.2e-33 144.8 257 35.0
Ciclev10025762m.g Citrus clementina HOM05D000891 ORTHO05D000761 6.2e-33 144.8 257 34.2
Thhalv10023199m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 8.1e-33 144.4 257 33.1
Potri.005G125400 Populus trichocarpa HOM05D000891 ORTHO05D000761 2.4e-32 142.9 257 33.9
AT2G18520 Arabidopsis thaliana HOM05D000891 ORTHO05D000761 3.1e-32 142.5 252 33.7
Sopen02g030200 Solanum pennellii HOM05D000891 ORTHO05D000761 3.1e-32 142.5 184 46.7
Sp3g31980 Schrenkiella parvula HOM05D000891 ORTHO05D000761 5.2e-32 141.7 257 33.5
Ah.03g139350 Amaranthus hybridus HOM05D000891 ORTHO05D000761 2.6e-31 139.4 257 34.2
BcaB07g31660 Brassica carinata HOM05D000891 ORTHO05D000761 7.6e-31 137.9 257 32.7
Carub.0003s3272 Capsella rubella HOM05D000891 ORTHO05D000761 7.6e-31 137.9 257 33.5
Solyc02g085550.3 Solanum lycopersicum HOM05D000891 ORTHO05D000761 7.6e-31 137.9 113 62.8
Carub.0007s0364 Capsella rubella HOM05D000891 ORTHO05D000761 9.9e-31 137.5 258 32.2
DCAR_025928 Daucus carota HOM05D000891 ORTHO05D000761 9.9e-31 137.5 263 32.3
CAN.G358.118 Capsicum annuum HOM05D000891 ORTHO05D000761 1.7e-30 136.7 185 43.8
Sabra07G0024600 Salix brachista HOM05D000891 ORTHO05D000761 1.7e-30 136.7 257 35.0
BcaC04g22899 Brassica carinata HOM05D000891 ORTHO05D000761 1.1e-29 134.0 257 31.5
A09p11950 Brassica napus HOM05D000891 ORTHO05D000761 1.1e-29 134.0 257 31.5
BolC9t54304H Brassica oleracea HOM05D000891 ORTHO05D000761 1.1e-29 134.0 257 31.5
BraA09t36840Z Brassica rapa HOM05D000891 ORTHO05D000761 1.1e-29 134.0 257 31.5
TWI53G1937 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 1.4e-29 133.7 263 35.4
PGR119G1317 Punica granatum HOM05D000891 ORTHO05D000761 1.9e-29 133.3 253 34.4
THA.LOC104819795 Tarenaya hassleriana HOM05D000891 ORTHO05D000761 1.9e-29 133.3 257 31.1
C09p14070 Brassica napus HOM05D000891 ORTHO05D000761 2.4e-29 132.9 257 31.1
C03p79970 Brassica napus HOM05D000891 ORTHO05D000761 3.2e-29 132.5 254 31.5
BolC3t20249H Brassica oleracea HOM05D000891 ORTHO05D000761 3.2e-29 132.5 254 31.5
BraA08t34190Z Brassica rapa HOM05D000891 ORTHO05D000761 3.2e-29 132.5 254 31.5
Eucgr.I02459 Eucalyptus grandis HOM05D000891 ORTHO05D000761 3.2e-29 132.5 257 33.9
Aa31LG8G15540 Aethionema arabicum HOM05D000891 ORTHO05D000761 5.4e-29 131.7 258 32.9
BcaC01g00449 Brassica carinata HOM05D000891 ORTHO05D000761 5.4e-29 131.7 254 31.5
Peaxi162Scf00008g03911 Petunia axillaris HOM05D000891 ORTHO05D000761 5.4e-29 131.7 120 52.5
Sc07g0000240 Simmondsia chinensis HOM05D000891 ORTHO05D000761 2.1e-28 129.8 258 33.3
BcaB03g12377 Brassica carinata HOM05D000891 ORTHO05D000761 2.7e-28 129.4 254 31.5
AUR62007998 Chenopodium quinoa HOM05D000891 ORTHO05D000761 3.5e-28 129.0 257 32.7
A08p22340 Brassica napus HOM05D000891 ORTHO05D000761 7.8e-28 127.9 254 31.1
THA.LOC104807440 Tarenaya hassleriana HOM05D000891 ORTHO05D000761 7.8e-28 127.9 258 31.8
TAR376G0069 Trochodendron aralioides HOM05D000891 ORTHO05D000761 8.7e-27 124.4 120 50.8
Potri.007G028400 Populus trichocarpa HOM05D000891 ORTHO05D000761 1.9e-26 123.2 257 31.9
Aqoxy3G04282 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 3.1e-24 115.9 122 46.7
SGA_v2.0_scaffold33G13374 Striga asiatica HOM05D000891 ORTHO05D000761 5.2e-24 115.2 260 31.2
FAN23G1659 Fragaria x ananassa HOM05D000891 ORTHO05D000761 1.2e-23 114.0 203 32.5
Oeu014916.1 Olea europaea HOM05D000891 ORTHO05D000761 1.4e-21 107.1 120 46.7
Aqoxy3G04285 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 1.6e-20 103.6 122 45.9
GSVIVG01018992001 Vitis vinifera HOM05D000891 ORTHO05D000761 1.6e-20 103.6 228 32.5
CDE04G0575 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 6.6e-19 98.2 155 36.1
Aqoxy3G04283 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 4.3e-18 95.5 134 39.6
CSS0005000 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 4.3e-18 95.5 95 51.6
CSS0021849 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 4.3e-18 95.5 95 51.6
CDE05G1845 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 2.8e-17 92.8 221 31.7
FAN19G1656 Fragaria x ananassa HOM05D000891 ORTHO05D000761 8.1e-17 91.3 258 27.1
FvH4_1g13650 Fragaria vesca HOM05D000891 ORTHO05D000761 2.4e-16 89.7 92 48.9
RcHm_v2.0_Chr2g0102001 Rosa chinensis HOM05D000891 ORTHO05D000761 1.2e-15 87.4 258 27.1
ATR0618G378 Amborella trichopoda HOM05D000891 ORTHO05D000761 4.5e-15 85.5 94 45.7
MBI03_g33920_MAGBIO Magnolia biondii HOM05D000891 ORTHO05D000761 9.9e-15 84.3 92 44.6
CDE02G2552 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 1.7e-14 83.6 179 30.7
MBI06_g04641_MAGBIO Magnolia biondii HOM05D000891 ORTHO05D000761 4.9e-14 82.0 87 46.0
Thhalv10017741m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 5.4e-13 78.6 127 31.5
FAN28G2884 Fragaria x ananassa HOM05D001084 ORTHO05D001275 1.6e-12 77.0 82 48.8
FAN26G0747 Fragaria x ananassa HOM05D001563 ORTHO05D000761 2.1e-12 76.6 82 47.6
CDE12G0148 Ceratophyllum demersum HOM05D000891 ORTHO05D000761 2.3e-11 73.2 198 28.8
Lj6g0017835 Lotus japonicus HOM05D000891 ORTHO05D000761 3.0e-11 72.8 120 35.8
Nitab4.5_0001279g0060 Nicotiana tabacum HOM05D000891 ORTHO05D000761 6.7e-11 71.6 106 45.3
Zm00001eb248020 Zea mays HOM05D000891 ORTHO05D000761 8.7e-11 71.2 261 23.8
HPP92_012848 Vanilla planifolia HOM05D000891 ORTHO05D000761 1.1e-10 70.9 108 39.8
Gohir.A09G069200 Gossypium hirsutum HOM05D000891 ORTHO05D000761 1.9e-10 70.1 149 32.2
Actinidia26936 Actinidia chinensis HOM05D000891 ORTHO05D000761 2.5e-10 69.7 181 27.6
Nitab4.5_0000105g0410 Nicotiana tabacum HOM05D000891 ORTHO05D000761 2.5e-10 69.7 181 26.5
ECA236G1633 Erigeron canadensis HOM05D000891 ORTHO05D000761 7.4e-10 68.2 123 30.9
Oeu014912.1 Olea europaea HOM05D000891 ORTHO05D000761 7.4e-10 68.2 172 23.3
PSO384G2172 Papaver somniferum HOM05D000891 ORTHO05D000761 9.6e-10 67.8 83 44.6
TAR629G1624 Trochodendron aralioides HOM05D000891 ORTHO05D000761 1.6e-09 67.0 155 27.7
Gohir.A06G121700 Gossypium hirsutum HOM05D000891 ORTHO05D000761 4.8e-09 65.5 139 28.8
CSS0036990 Camellia sinensis var. sinensis HOM05D000891 ORTHO05D000761 8.1e-09 64.7 156 26.9
ATR0618G089 Amborella trichopoda HOM05D000891 ORTHO05D000761 1.1e-08 64.3 80 41.2
MBI06_g44586_MAGBIO Magnolia biondii HOM05D000891 ORTHO05D000761 1.1e-08 64.3 162 24.1
ATR0618G043 Amborella trichopoda HOM05D000891 ORTHO05D000761 4.0e-08 62.4 79 40.5
Hma1.2p1_0813F.1_g222620 Hydrangea macrophylla HOM05D000891 ORTHO05D000761 4.0e-08 62.4 124 28.2
Nitab4.5_0000425g0250 Nicotiana tabacum HOM05D000891 ORTHO05D000761 9.0e-08 61.2 126 30.2
Haze_06789 Corylus avellana HOM05D000891 ORTHO05D000761 1.2e-07 60.8 124 28.2
Aqoxy3G03369 Aquilegia oxysepala HOM05D002453 ORTHO05D002107 1.5e-07 60.5 119 24.4
HPP92_012851 Vanilla planifolia HOM05D040803 ORTHO05D037120 1.5e-07 60.5 48 58.3
Sp7g16020 Schrenkiella parvula HOM05D000891 ORTHO05D000761 2.6e-07 59.7 110 36.4
Aqoxy4G01892 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 3.4e-07 59.3 103 34.0
AUR62044184 Chenopodium quinoa HOM05D000891 ORTHO05D000761 3.4e-07 59.3 206 22.8
Nn4g24891 Nelumbo nucifera HOM05D000891 ORTHO05D000761 3.4e-07 59.3 71 43.7
Aqoxy3G04284 Aquilegia oxysepala HOM05D000891 ORTHO05D000761 4.5e-07 58.9 122 32.8
A07p26530 Brassica napus HOM05D000891 ORTHO05D000761 1.7e-06 57.0 181 23.8
Manes.05G012004 Manihot esculenta HOM05D003039 ORTHO05D009478 1.7e-06 57.0 105 33.3
AUR62012561 Chenopodium quinoa HOM05D000891 ORTHO05D000761 2.2e-06 56.6 93 29.0
AL1G22760 Arabidopsis lyrata HOM05D000891 ORTHO05D000761 2.9e-06 56.2 114 28.1
Zm00001eb227290 Zea mays HOM05D000891 ORTHO05D000761 2.9e-06 56.2 120 26.7
Haze_03423 Corylus avellana HOM05D000027 ORTHO05D000500 3.8e-06 55.8 106 33.0
Peaxi162Scf00180g00114 Petunia axillaris HOM05D000891 ORTHO05D000761 3.8e-06 55.8 99 30.3
TWI38G0441 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 3.8e-06 55.8 125 29.6
TWI63G1417 Tripterygium wilfordii HOM05D000891 ORTHO05D000761 3.8e-06 55.8 125 28.0
MSTRG.4712 Avicennia marina HOM05D000891 ORTHO05D000761 4.9e-06 55.5 124 24.2
BolC5t29717H Brassica oleracea HOM05D000891 ORTHO05D000761 4.9e-06 55.5 113 28.3
BcaC05g25031 Brassica carinata HOM05D000891 ORTHO05D000761 6.4e-06 55.1 113 28.3
C05p09760 Brassica napus HOM05D000891 ORTHO05D000761 6.4e-06 55.1 113 28.3
Thhalv10007792m.g Eutrema salsugineum HOM05D000891 ORTHO05D000761 6.4e-06 55.1 111 30.6
MELO3C007342.2 Cucumis melo HOM05D000891 ORTHO05D000761 8.4e-06 54.7 100 27.0
Eucgr.J03058 Eucalyptus grandis HOM05D000891 ORTHO05D000761 8.4e-06 54.7 120 26.7


User provided reference genes

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