Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001816g0160 Nicotiana tabacum HOM05D005346 ORTHO05D020323 2.7e-124 448.7 233 100.0
Nitab4.5_0001265g0030 Nicotiana tabacum HOM05D005346 ORTHO05D020323 2.5e-90 335.9 240 77.5
Sopen08g003450 Solanum pennellii HOM05D005346 ORTHO05D020323 5.1e-83 311.6 240 72.9
Solyc08g007490.3 Solanum lycopersicum HOM05D005346 ORTHO05D020323 1.1e-82 310.5 240 72.5
Peaxi162Scf00102g01240 Petunia axillaris HOM05D005346 ORTHO05D020323 6.8e-80 301.2 241 71.0
PGSC0003DMG400012509 Solanum tuberosum HOM05D005346 ORTHO05D020323 3.3e-50 202.6 178 66.3
CAN.G1394.34 Capsicum annuum HOM05D005346 ORTHO05D020323 2.4e-40 169.9 171 59.6
Cc08_g13250 Coffea canephora HOM05D005346 ORTHO05D007051 1.7e-33 147.1 195 47.2
vmacro14041 Vaccinium macrocarpon HOM05D005346 ORTHO05D007051 1.1e-32 144.4 217 43.8
Rhsim07G0101400 Rhododendron simsii HOM05D005346 ORTHO05D007051 4.1e-32 142.5 214 44.4
Actinidia02088 Actinidia chinensis HOM05D005346 ORTHO05D007051 1.5e-31 140.6 167 48.5
CSS0033087 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 3.4e-31 139.4 163 50.3
CSS0047104 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 5.9e-31 138.7 167 50.3
Dinv39076 Davidia involucrata HOM05D005346 ORTHO05D007051 5.9e-31 138.7 216 44.0
Peaxi162Scf00271g00130 Petunia axillaris HOM05D005346 ORTHO05D007051 7.7e-31 138.3 184 46.2
CSS0010264 Camellia sinensis var. sinensis HOM05D005346 ORTHO05D007051 2.2e-30 136.7 166 50.0
Sopen08g027860 Solanum pennellii HOM05D005346 ORTHO05D007051 6.5e-30 135.2 167 47.3
unitig_749.g13414 Utricularia gibba HOM05D005346 ORTHO05D007051 6.5e-30 135.2 169 47.3
DCAR_006800 Daucus carota HOM05D005346 ORTHO05D007051 8.5e-30 134.8 148 51.4
Solyc08g079490.4 Solanum lycopersicum HOM05D005346 ORTHO05D007051 1.1e-29 134.4 167 46.7
MSTRG.25547 Avicennia marina HOM05D005346 ORTHO05D007051 4.2e-29 132.5 174 48.9
CAN.G630.80 Capsicum annuum HOM05D005346 ORTHO05D007051 5.5e-29 132.1 163 46.0
Nitab4.5_0012948g0030 Nicotiana tabacum HOM05D005346 ORTHO05D007051 1.2e-28 131.0 171 46.8
MSTRG.12059 Avicennia marina HOM05D005346 ORTHO05D007051 1.6e-28 130.6 172 48.8
Cfa012017 Carpinus fangiana HOM05D005346 ORTHO05D007051 1.6e-28 130.6 206 41.3
Haze_09052 Corylus avellana HOM05D005346 ORTHO05D007051 1.6e-28 130.6 206 41.3
Lj8A255T54 Lonicera japonica HOM05D005346 ORTHO05D007051 2.1e-28 130.2 244 41.0
SGA_v2.0_scaffold196G40944 Striga asiatica HOM05D005346 ORTHO05D007051 2.1e-28 130.2 195 45.1
Oeu016508.1 Olea europaea HOM05D005346 ORTHO05D007051 2.7e-28 129.8 172 47.7
Lsat_1_v5_gn_6_9800 Lactuca sativa HOM05D005346 ORTHO05D007051 4.7e-28 129.0 208 43.3
CARHR048890 Cardamine hirsuta HOM05D005346 ORTHO05D007051 7.9e-28 128.3 202 42.1
Migut.E01045 Erythranthe guttata HOM05D005346 ORTHO05D007051 7.9e-28 128.3 180 46.1
PGSC0003DMG400003934 Solanum tuberosum HOM05D005346 ORTHO05D007051 7.9e-28 128.3 191 41.9
SGA_v2.0_scaffold120G32813 Striga asiatica HOM05D002260 ORTHO05D000476 1.0e-27 127.9 167 47.9
Carub.0002s0213 Capsella rubella HOM05D005346 ORTHO05D007051 2.3e-27 126.7 202 42.1
AL2G12910 Arabidopsis lyrata HOM05D005346 ORTHO05D007051 3.0e-27 126.3 202 42.1
Nn4g26377 Nelumbo nucifera HOM05D005346 ORTHO05D007051 3.9e-27 125.9 215 42.3
Gohir.A03G011800 Gossypium hirsutum HOM05D005346 ORTHO05D007051 6.7e-27 125.2 201 41.3
GSVIVG01004909001 Vitis vinifera HOM05D005346 ORTHO05D007051 6.7e-27 125.2 142 51.4
Gorai.003G166600 Gossypium raimondii HOM05D005346 ORTHO05D007051 1.1e-26 124.4 201 40.8
PGR042G0462 Punica granatum HOM05D005346 ORTHO05D007051 1.1e-26 124.4 197 43.1
Atru.chr9.1434 Acer truncatum HOM05D005346 ORTHO05D007051 1.5e-26 124.0 218 39.4
Ciclev10021953m.g Citrus clementina HOM05D005346 ORTHO05D007051 2.0e-26 123.6 154 49.4
Eucgr.E00475 Eucalyptus grandis HOM05D005346 ORTHO05D007051 2.0e-26 123.6 167 44.9
THA.LOC104809446 Tarenaya hassleriana HOM05D005346 ORTHO05D007051 2.6e-26 123.2 203 41.4
Glyma.05G052900 Glycine max HOM05D005346 ORTHO05D007051 3.3e-26 122.9 199 43.2
SGA_v2.0_scaffold146G36182 Striga asiatica HOM05D005346 ORTHO05D007051 3.3e-26 122.9 162 46.9
Manes.01G073500 Manihot esculenta HOM05D005346 ORTHO05D007051 5.7e-26 122.1 211 39.3
Potri.003G115300 Populus trichocarpa HOM05D005346 ORTHO05D007051 7.4e-26 121.7 215 39.5
BcaB07g31363 Brassica carinata HOM05D005346 ORTHO05D007051 1.3e-25 120.9 202 41.1
AT1G62850 Arabidopsis thaliana HOM05D005346 ORTHO05D007051 1.7e-25 120.6 202 42.6
Thhalv10023661m.g Eutrema salsugineum HOM05D005346 ORTHO05D007051 2.2e-25 120.2 203 42.9
Potri.001G117500 Populus trichocarpa HOM05D005346 ORTHO05D007051 2.2e-25 120.2 205 39.5
Aa31LG2G370 Aethionema arabicum HOM05D005346 ORTHO05D007051 2.8e-25 119.8 201 38.8
Cpa.g.sc29.89 Carica papaya HOM05D005346 ORTHO05D007051 3.7e-25 119.4 215 40.5
Duzib084G0498 Durio zibethinus HOM05D005346 ORTHO05D007051 3.7e-25 119.4 216 38.0
Sc22g0000580 Simmondsia chinensis HOM05D005346 ORTHO05D007051 3.7e-25 119.4 134 50.7
Sp2g01760 Schrenkiella parvula HOM05D005346 ORTHO05D007051 6.3e-25 118.6 202 41.6
Hund28689 Selenicereus undatus HOM05D005346 ORTHO05D007051 6.3e-25 118.6 188 43.6
Hund28691 Selenicereus undatus HOM05D005346 ORTHO05D007051 6.3e-25 118.6 188 43.6
PSO478G1917 Papaver somniferum HOM05D005346 ORTHO05D007051 8.2e-25 118.2 183 42.1
SalBow1G0489 Salvia bowleyana HOM05D005346 ORTHO05D007051 8.2e-25 118.2 178 44.9
PSO782G1275 Papaver somniferum HOM05D005346 ORTHO05D007051 1.1e-24 117.9 183 43.7
BcaC04g22452 Brassica carinata HOM05D005346 ORTHO05D007051 1.4e-24 117.5 199 40.7
Hma1.2p1_0138F.1_g063170 Hydrangea macrophylla HOM05D005346 ORTHO05D007051 1.4e-24 117.5 167 45.5
C09p19170 Brassica napus HOM05D005346 ORTHO05D007051 1.8e-24 117.1 199 40.7
BolC9t54826H Brassica oleracea HOM05D005346 ORTHO05D007051 1.8e-24 117.1 199 40.7
TAR629G0356 Trochodendron aralioides HOM05D005346 ORTHO05D007051 1.8e-24 117.1 213 40.8
Thecc.03G262000 Theobroma cacao HOM05D005346 ORTHO05D007051 2.4e-24 116.7 187 42.2
Sabra01G0090200 Salix brachista HOM05D005346 ORTHO05D007051 3.1e-24 116.3 129 51.2
A09p15920 Brassica napus HOM05D005346 ORTHO05D007051 4.1e-24 115.9 200 39.5
BraA09t37228Z Brassica rapa HOM05D005346 ORTHO05D007051 4.1e-24 115.9 200 39.5
CDE11G0613 Ceratophyllum demersum HOM05D005346 ORTHO05D007051 4.1e-24 115.9 135 47.4
Ca_12281_v3 Cicer arietinum L. HOM05D002260 ORTHO05D007051 4.1e-24 115.9 163 46.0
TWI60G0731 Tripterygium wilfordii HOM05D005346 ORTHO05D007051 5.3e-24 115.5 151 46.4
HPP92_003521 Vanilla planifolia HOM05D005346 ORTHO05D007051 5.3e-24 115.5 160 45.6
Glyma.17G135200 Glycine max HOM05D005346 ORTHO05D007051 6.9e-24 115.2 183 43.2
QL05p030033 Quercus lobata HOM05D005346 ORTHO05D007051 6.9e-24 115.2 201 42.3
QL12p015018 Quercus lobata HOM05D005346 ORTHO05D007051 6.9e-24 115.2 201 42.3
Sabra03G0079900 Salix brachista HOM05D005346 ORTHO05D007051 6.9e-24 115.2 142 46.5
TAR629G0085 Trochodendron aralioides HOM05D005346 ORTHO05D007051 6.9e-24 115.2 134 50.7
arahy.Tifrunner.gnm1.ann1.FP1HKG Arachis hypogaea HOM05D005346 ORTHO05D007051 9.1e-24 114.8 150 46.7
HanXRQChr17g0549091 Helianthus annuus HOM05D005346 ORTHO05D007051 9.1e-24 114.8 171 43.3
Medtr4g102230 Medicago truncatula HOM05D005346 ORTHO05D007051 9.1e-24 114.8 163 46.0
CiPaw.12G104700 Carya illinoinensis HOM05D005346 ORTHO05D007051 1.2e-23 114.4 198 40.9
Zm00001eb010680 Zea mays HOM05D005346 ORTHO05D007051 1.2e-23 114.4 184 40.8
AUR62010513 Chenopodium quinoa HOM05D005346 ORTHO05D007051 1.5e-23 114.0 189 39.7
AUR62017389 Chenopodium quinoa HOM05D005346 ORTHO05D007051 1.5e-23 114.0 215 39.1
ATR0579G161 Amborella trichopoda HOM05D005346 ORTHO05D007051 2.6e-23 113.2 170 42.9
VMungo1215G1290 Vigna mungo HOM05D005346 ORTHO05D007051 2.6e-23 113.2 149 47.7
Lalb_Chr05g0225391 Lupinus albus HOM05D005346 ORTHO05D007051 3.4e-23 112.8 179 41.9
EL10Ac5g12617 Beta vulgaris HOM05D005346 ORTHO05D007051 4.5e-23 112.5 153 45.1
MBI12_g34008_MAGBIO Magnolia biondii HOM05D005346 ORTHO05D007051 5.9e-23 112.1 147 46.3
RcHm_v2.0_Chr7g0201521 Rosa chinensis HOM05D005346 ORTHO05D007051 5.9e-23 112.1 153 46.4
Psat4g068640 Pisum sativum HOM05D005346 ORTHO05D007051 7.7e-23 111.7 163 45.4
MELO3C013984.2 Cucumis melo HOM05D005346 ORTHO05D007051 2.2e-22 110.2 142 45.8
Lj4g0017997 Lotus japonicus HOM05D005346 ORTHO05D007051 2.2e-22 110.2 149 46.3
CANSAT21G2498 Cannabis sativa HOM05D005346 ORTHO05D007051 2.9e-22 109.8 188 41.0
Aqoxy7G00648 Aquilegia oxysepala HOM05D005346 ORTHO05D007051 3.8e-22 109.4 179 41.9
FvH4_5g00690 Fragaria vesca HOM05D005346 ORTHO05D007051 3.8e-22 109.4 153 45.1
Os03g0249200 Oryza sativa ssp. japonica HOM05D005346 ORTHO05D007051 3.8e-22 109.4 171 41.5
Phvul.003G215000 Phaseolus vulgaris HOM05D005346 ORTHO05D007051 5.0e-22 109.0 191 40.3
TPR.G37664 Trifolium pratense HOM05D005346 ORTHO05D007051 1.1e-21 107.8 135 50.4
FAN04G2793 Fragaria x ananassa HOM05D000062 ORTHO05D007051 1.4e-21 107.5 191 40.3
MD04G1079400 Malus domestica HOM05D005346 ORTHO05D007051 1.4e-21 107.5 149 48.3
FAN13G0616 Fragaria x ananassa HOM05D005346 ORTHO05D007051 3.2e-21 106.3 129 48.8
CsaV3_3G003190 Cucumis sativus L. HOM05D005346 ORTHO05D007051 4.2e-21 105.9 129 48.1
ECA233G1833 Erigeron canadensis HOM05D005346 ORTHO05D007051 5.5e-21 105.5 153 46.4
COL.COLO4_23877 Corchorus olitorius HOM05D005346 ORTHO05D007051 1.2e-20 104.4 220 38.2
Prupe.5G079700 Prunus persica HOM05D005346 ORTHO05D007051 1.6e-20 104.0 191 41.4
SEGI_23485 Sequoiadendron giganteum HOM05D005346 ORTHO05D007051 1.6e-20 104.0 151 42.4
SalBow6G4970 Salvia bowleyana HOM05D005346 ORTHO05D007051 2.7e-20 103.2 116 52.6
ClCG10G003160 Citrullus lanatus HOM05D005346 ORTHO05D007051 1.5e-18 97.4 143 46.2
Pp3c9_5680 Physcomitrium patens HOM05D005346 ORTHO05D007051 2.0e-18 97.1 120 43.3
Sed0008355 Sechium edule HOM05D005346 ORTHO05D007051 1.8e-16 90.5 186 38.2
Mapoly0185s0016 Marchantia polymorpha HOM05D005346 ORTHO05D007051 2.9e-14 83.2 134 38.1
CBR_g59652 Chara braunii HOM05D005346 ORTHO05D007051 1.2e-12 77.8 172 34.9
Gohir.D03G158100 Gossypium hirsutum HOM05D005346 ORTHO05D007051 1.6e-12 77.4 151 35.8
arahy.Tifrunner.gnm1.ann1.IL3HUZ Arachis hypogaea HOM05D005346 ORTHO05D007051 2.7e-12 76.6 130 40.0
Migut.E01266 Erythranthe guttata HOM05D005346 ORTHO05D007051 1.0e-11 74.7 114 43.0
SEGI_25852 Sequoiadendron giganteum HOM05D005346 ORTHO05D007051 1.8e-11 73.9 83 51.8
Gorai.005G179200 Gossypium raimondii HOM05D005346 ORTHO05D007051 3.0e-11 73.2 108 38.9
Actinidia14465 Actinidia chinensis HOM05D005346 ORTHO05D007051 6.7e-11 72.0 227 30.8
Gohir.D06G129850 Gossypium hirsutum HOM05D005346 ORTHO05D007051 8.8e-11 71.6 108 38.0
Gorai.011G192800 Gossypium raimondii HOM05D005346 ORTHO05D007051 1.2e-10 71.2 119 37.8
Gorai.002G177500 Gossypium raimondii HOM05D005346 ORTHO05D007051 2.0e-10 70.5 79 45.6
SEGI_00698 Sequoiadendron giganteum HOM05D005346 ORTHO05D007051 8.2e-09 65.1 86 46.5
AagrBONN_evm.TU.Sc2ySwM_369.472 Anthoceros agrestis HOM05D005346 ORTHO05D007051 4.1e-08 62.8 102 36.3
Gohir.D13G182400 Gossypium hirsutum HOM05D005346 ORTHO05D007051 7.0e-08 62.0 81 40.7
MCO12G072 Micromonas commoda HOM05D005346 ORTHO05D007051 2.7e-07 60.1 119 35.3
SMO164G0226 Selaginella moellendorffii HOM05D005346 ORTHO05D007051 8.5e-06 55.1 70 42.9


User provided reference genes

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