Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001812g0050 Nicotiana tabacum HOM05D003067 ORTHO05D007251 3.0e-110 401.7 191 100.0
Solyc12g010220.3 Solanum lycopersicum HOM05D003067 ORTHO05D007251 1.3e-65 253.4 192 74.5
Sopen12g005110 Solanum pennellii HOM05D003067 ORTHO05D007251 1.8e-65 253.1 192 74.0
PGSC0003DMG400007895 Solanum tuberosum HOM05D003067 ORTHO05D007251 3.0e-65 252.3 192 74.0
Nitab4.5_0001478g0100 Nicotiana tabacum HOM05D003067 ORTHO05D007251 3.9e-65 251.9 192 74.0
Nitab4.5_0002315g0050 Nicotiana tabacum HOM05D003067 ORTHO05D007251 3.9e-65 251.9 192 74.0
Peaxi162Scf00108g00073 Petunia axillaris HOM05D003067 ORTHO05D007251 5.1e-65 251.5 192 74.0
CAN.G551.29 Capsicum annuum HOM05D003067 ORTHO05D007251 8.7e-65 250.8 192 73.4
Cc06_g15250 Coffea canephora HOM05D003067 ORTHO05D007251 9.0e-62 240.7 192 69.8
Lj7P455T22 Lonicera japonica HOM05D003067 ORTHO05D007251 2.6e-61 239.2 189 70.9
Peaxi162Scf00177g00916 Petunia axillaris HOM05D003067 ORTHO05D007251 2.9e-60 235.7 192 71.4
CSS0017292 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D007251 6.4e-60 234.6 189 69.3
CSS0043589 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D007251 6.4e-60 234.6 189 69.3
Dinv43215 Davidia involucrata HOM05D003067 ORTHO05D007251 1.4e-59 233.4 189 68.8
Cpa.g.sc46.128 Carica papaya HOM05D003067 ORTHO05D007251 1.9e-59 233.0 187 69.5
Haze_19236 Corylus avellana HOM05D003067 ORTHO05D007251 1.9e-59 233.0 187 69.5
Migut.C01262 Erythranthe guttata HOM05D003067 ORTHO05D007251 2.4e-59 232.6 192 67.7
Hma1.2p1_0222F.1_g093300 Hydrangea macrophylla HOM05D003067 ORTHO05D007251 2.4e-59 232.6 189 68.8
Rhsim01G0045000 Rhododendron simsii HOM05D003067 ORTHO05D007251 2.4e-59 232.6 188 69.7
RhsimUnG0172000 Rhododendron simsii HOM05D003067 ORTHO05D007251 2.4e-59 232.6 188 69.7
DCAR_014818 Daucus carota HOM05D003067 ORTHO05D007251 3.2e-59 232.3 188 69.1
Ciclev10009382m.g Citrus clementina HOM05D003067 ORTHO05D007251 4.2e-59 231.9 192 68.8
Manes.14G111800 Manihot esculenta HOM05D003067 ORTHO05D007251 5.5e-59 231.5 192 67.2
Atru.chr7.135 Acer truncatum HOM05D003067 ORTHO05D007251 7.1e-59 231.1 187 69.5
Sabra18G0093200 Salix brachista HOM05D003067 ORTHO05D007251 7.1e-59 231.1 192 66.7
Potri.018G110200 Populus trichocarpa HOM05D003067 ORTHO05D007251 9.3e-59 230.7 192 66.7
Dinv42885 Davidia involucrata HOM05D003067 ORTHO05D007251 1.2e-58 230.3 187 69.0
QL02p092650 Quercus lobata HOM05D003067 ORTHO05D007251 1.6e-58 229.9 187 68.4
THA.LOC104822364 Tarenaya hassleriana HOM05D003067 ORTHO05D007251 1.6e-58 229.9 192 66.1
Aa31LG2G710 Aethionema arabicum HOM05D000318 ORTHO05D007251 3.5e-58 228.8 190 66.8
Prupe.7G259900 Prunus persica HOM05D003067 ORTHO05D007251 3.5e-58 228.8 187 67.4
AL2G12000 Arabidopsis lyrata HOM05D003067 ORTHO05D007251 4.6e-58 228.4 192 66.7
BcaC04g22483 Brassica carinata HOM05D003067 ORTHO05D007251 4.6e-58 228.4 192 66.7
C09p18790 Brassica napus HOM05D003067 ORTHO05D007251 4.6e-58 228.4 192 66.7
BolC9t54781H Brassica oleracea HOM05D003067 ORTHO05D007251 4.6e-58 228.4 192 66.7
Thhalv10023673m.g Eutrema salsugineum HOM05D003067 ORTHO05D007251 4.6e-58 228.4 192 66.7
EL10Ac9g22772 Beta vulgaris HOM05D003067 ORTHO05D007251 6.0e-58 228.0 190 66.8
ClCG10G005110 Citrullus lanatus HOM05D003067 ORTHO05D007251 6.0e-58 228.0 190 66.8
Sp2g01250 Schrenkiella parvula HOM05D003067 ORTHO05D007251 6.0e-58 228.0 192 66.7
AT1G63270 Arabidopsis thaliana HOM05D003067 ORTHO05D007251 7.9e-58 227.6 192 66.7
MSTRG.11189 Avicennia marina HOM05D003067 ORTHO05D007251 7.9e-58 227.6 192 66.1
Carub.0002s0155 Capsella rubella HOM05D003067 ORTHO05D007251 7.9e-58 227.6 192 66.7
Dinv41399 Davidia involucrata HOM05D003067 ORTHO05D007251 7.9e-58 227.6 185 69.7
AL2G11880 Arabidopsis lyrata HOM05D000318 ORTHO05D007251 1.0e-57 227.3 190 66.8
AL2G11970 Arabidopsis lyrata HOM05D000318 ORTHO05D007251 1.0e-57 227.3 190 66.8
EL10Ac3g05662 Beta vulgaris HOM05D003067 ORTHO05D007251 1.0e-57 227.3 190 66.3
A09p15540 Brassica napus HOM05D003067 ORTHO05D007251 1.0e-57 227.3 192 66.1
BraA09t37194Z Brassica rapa HOM05D003067 ORTHO05D007251 1.0e-57 227.3 192 66.1
COL.COLO4_18775 Corchorus olitorius HOM05D003067 ORTHO05D007251 1.0e-57 227.3 192 65.6
Duzib187G1913 Durio zibethinus HOM05D003067 ORTHO05D007251 1.0e-57 227.3 192 66.1
Eucgr.C00365 Eucalyptus grandis HOM05D003067 ORTHO05D007251 1.3e-57 226.9 190 66.3
PGR142G0687 Punica granatum HOM05D003067 ORTHO05D007251 1.3e-57 226.9 192 65.6
Thecc.09G033800 Theobroma cacao HOM05D003067 ORTHO05D007251 2.3e-57 226.1 190 66.3
BcaB07g31398 Brassica carinata HOM05D003067 ORTHO05D007251 3.0e-57 225.7 192 66.1
CARHR048140 Cardamine hirsuta HOM05D003067 ORTHO05D007251 3.0e-57 225.7 192 66.7
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 3.0e-57 225.7 182 69.8
TWI34G0114 Tripterygium wilfordii HOM05D003067 ORTHO05D007251 3.9e-57 225.3 192 64.6
Gohir.D10G035400 Gossypium hirsutum HOM05D003067 ORTHO05D007251 5.1e-57 224.9 190 66.3
Gorai.011G037200 Gossypium raimondii HOM05D003067 ORTHO05D007251 5.1e-57 224.9 190 66.3
CiPaw.15G174100 Carya illinoinensis HOM05D003067 ORTHO05D007251 8.7e-57 224.2 190 66.8
FvH4_1g01200 Fragaria vesca HOM05D003067 ORTHO05D007251 8.7e-57 224.2 187 67.4
FAN23G0234 Fragaria x ananassa HOM05D003067 ORTHO05D007251 8.7e-57 224.2 187 67.4
FAN28G1587 Fragaria x ananassa HOM05D003067 ORTHO05D007251 8.7e-57 224.2 187 67.4
Oeu021254.1 Olea europaea HOM05D003067 ORTHO05D007251 1.1e-56 223.8 188 67.6
FAN19G2760 Fragaria x ananassa HOM05D003067 ORTHO05D007251 1.9e-56 223.0 187 66.8
RcHm_v2.0_Chr2g0086001 Rosa chinensis HOM05D003067 ORTHO05D007251 1.9e-56 223.0 187 66.8
MD02G1010200 Malus domestica HOM05D003067 ORTHO05D007251 2.5e-56 222.6 187 66.3
Sed0009590 Sechium edule HOM05D003067 ORTHO05D007251 4.3e-56 221.9 192 64.6
Gohir.A10G034666 Gossypium hirsutum HOM05D003067 ORTHO05D007251 5.6e-56 221.5 187 66.8
Actinidia04284 Actinidia chinensis HOM05D003067 ORTHO05D007251 7.4e-56 221.1 188 67.0
AUR62035264 Chenopodium quinoa HOM05D003067 ORTHO05D007251 9.6e-56 220.7 190 63.2
MELO3C014177.2 Cucumis melo HOM05D003067 ORTHO05D007251 9.6e-56 220.7 187 66.3
Hund26544 Selenicereus undatus HOM05D003067 ORTHO05D007251 3.7e-55 218.8 184 65.8
SGA_v2.0_scaffold223G42827 Striga asiatica HOM05D003067 ORTHO05D007251 4.8e-55 218.4 181 68.0
CsaV3_3G004790 Cucumis sativus L. HOM05D003067 ORTHO05D007251 8.1e-55 217.6 187 64.7
Sc18g0006940 Simmondsia chinensis HOM05D003067 ORTHO05D007251 1.1e-54 217.2 191 64.4
ECA234G4787 Erigeron canadensis HOM05D003067 ORTHO05D007251 1.4e-54 216.9 185 66.5
FvH4_1g01210 Fragaria vesca HOM05D003067 ORTHO05D007251 1.4e-54 216.9 187 65.2
Ca_21111_v3 Cicer arietinum L. HOM05D003067 ORTHO05D007251 5.3e-54 214.9 187 63.6
HanXRQChr10g0314651 Helianthus annuus HOM05D003067 ORTHO05D007251 5.3e-54 214.9 185 65.9
Psat4g008800 Pisum sativum HOM05D003067 ORTHO05D007251 9.0e-54 214.2 187 64.2
PSO339G4470 Papaver somniferum HOM05D003067 ORTHO05D007251 1.2e-53 213.8 186 65.1
PSO063G5563 Papaver somniferum HOM05D003067 ORTHO05D007251 1.5e-53 213.4 186 65.1
Aqoxy5G03664 Aquilegia oxysepala HOM05D003067 ORTHO05D007251 2.0e-53 213.0 186 64.5
Aqoxy2G01213 Aquilegia oxysepala HOM05D003067 ORTHO05D007251 2.6e-53 212.6 186 64.5
PSO063G0174 Papaver somniferum HOM05D003067 ORTHO05D007251 2.6e-53 212.6 186 64.5
PSO384G1039 Papaver somniferum HOM05D003067 ORTHO05D007251 1.3e-52 210.3 186 64.0
Nn4g26426 Nelumbo nucifera HOM05D003067 ORTHO05D007251 1.7e-52 209.9 184 65.8
Os04g0627200 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D007251 1.7e-52 209.9 185 63.8
Glyma.13G154800 Glycine max HOM05D003067 ORTHO05D007251 2.2e-52 209.5 192 61.5
unitig_32.g11754 Utricularia gibba HOM05D003067 ORTHO05D007251 4.9e-52 208.4 191 60.7
VMungo1215G2568 Vigna mungo HOM05D003067 ORTHO05D007251 4.9e-52 208.4 187 62.6
Lj4g0016734 Lotus japonicus HOM05D003067 ORTHO05D007251 1.9e-51 206.5 187 62.6
SHI31898 Sapria himalayana HOM05D003067 ORTHO05D007251 1.9e-51 206.5 192 58.3
Zm00001eb431360 Zea mays HOM05D003067 ORTHO05D007251 4.2e-51 205.3 186 62.4
Medtr4g131330 Medicago truncatula HOM05D003067 ORTHO05D007251 7.1e-51 204.5 192 60.9
TPR.G39220 Trifolium pratense HOM05D003067 ORTHO05D007251 1.6e-50 203.4 188 59.0
HPP92_015883 Vanilla planifolia HOM05D003067 ORTHO05D007251 2.1e-50 203.0 187 62.6
Gorai.010G111900 Gossypium raimondii HOM05D003067 ORTHO05D007251 3.5e-50 202.2 175 66.3
TAR383G0409 Trochodendron aralioides HOM05D003067 ORTHO05D007251 4.6e-50 201.8 186 62.9
CDE04G0735 Ceratophyllum demersum HOM05D003067 ORTHO05D007251 7.9e-50 201.1 178 65.7
GSVIVG01033294001 Vitis vinifera HOM05D003067 ORTHO05D007251 1.8e-49 199.9 187 58.8
Lalb_Chr19g0125941 Lupinus albus HOM05D003067 ORTHO05D007251 3.9e-49 198.7 192 59.9
MD15G1155200 Malus domestica HOM05D003067 ORTHO05D007251 5.1e-49 198.4 182 62.6
MBI02_g23956_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D007251 8.7e-49 197.6 186 61.3
BolC1t03287H Brassica oleracea HOM05D003067 ORTHO05D007251 1.1e-48 197.2 190 61.1
Zm00001eb069730 Zea mays HOM05D003067 ORTHO05D007251 1.9e-48 196.4 188 59.0
Zm00001eb069940 Zea mays HOM05D003067 ORTHO05D007251 1.9e-48 196.4 188 59.0
Zm00001eb069870 Zea mays HOM05D003067 ORTHO05D007251 3.3e-48 195.7 188 59.0
MBI02_g23954_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D007251 9.6e-48 194.1 181 61.3
Gohir.D06G096900 Gossypium hirsutum HOM05D003067 ORTHO05D007251 3.7e-47 192.2 190 60.0
ATR0680G235 Amborella trichopoda HOM05D003067 ORTHO05D007251 7.6e-45 184.5 185 59.5
Phvul.003G157800 Phaseolus vulgaris HOM05D003067 ORTHO05D007251 1.0e-44 184.1 177 59.9
Zm00001eb069890 Zea mays HOM05D003067 ORTHO05D007251 3.3e-40 169.1 173 57.2
MD00G1161600 Malus domestica HOM05D003067 ORTHO05D007251 2.8e-39 166.0 140 64.3
Oeu043498.1 Olea europaea HOM05D003067 ORTHO05D007251 6.5e-36 154.8 182 53.8
Zm00001eb070010 Zea mays HOM05D003067 ORTHO05D007251 7.7e-29 131.3 98 68.4
Pp3c16_5430 Physcomitrium patens HOM05D003067 ORTHO05D007251 6.5e-28 128.3 178 43.8
Nitab4.5_0007909g0020 Nicotiana tabacum HOM05D003067 ORTHO05D007251 5.5e-27 125.2 69 91.3
Mapoly0096s0064 Marchantia polymorpha HOM05D003067 ORTHO05D007251 1.8e-25 120.2 174 41.4
arahy.Tifrunner.gnm1.ann1.8U5735 Arachis hypogaea HOM05D003067 ORTHO05D007251 2.3e-25 119.8 91 68.1
Peaxi162Scf00108g00811 Petunia axillaris HOM05D003067 ORTHO05D007251 7.4e-24 114.8 136 50.7
CDE05G0741 Ceratophyllum demersum HOM05D003067 ORTHO05D007251 1.8e-22 110.2 83 68.7
Lj3g0009875 Lotus japonicus HOM05D003067 ORTHO05D007251 6.7e-17 91.7 137 46.7
SEGI_15801 Sequoiadendron giganteum HOM05D003067 ORTHO05D007251 4.4e-16 89.0 130 41.5
Actinidia38340 Actinidia chinensis HOM05D003779 ORTHO05D007251 2.2e-15 86.7 110 53.6
Nitab4.5_0007909g0030 Nicotiana tabacum HOM05D003067 ORTHO05D007251 6.3e-15 85.1 59 78.0
Zm00001eb069810 Zea mays HOM05D003067 ORTHO05D007251 1.8e-14 83.6 70 62.9
SEGI_33800 Sequoiadendron giganteum HOM05D003067 ORTHO05D007251 1.6e-13 80.5 63 61.9
arahy.Tifrunner.gnm1.ann1.X1G7ME Arachis hypogaea HOM05D003067 ORTHO05D007251 2.9e-12 76.3 58 69.0
CBR_g47104 Chara braunii HOM05D000019 ORTHO05D000048 3.6e-10 69.3 115 40.0


User provided reference genes

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