Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001809g0020 Nicotiana tabacum HOM05D005265 ORTHO05D006326 7.0e-66 253.8 131 100.0
Nitab4.5_0000100g0280 Nicotiana tabacum HOM05D005265 ORTHO05D006326 6.6e-64 247.3 131 96.9
Nitab4.5_0003368g0030 Nicotiana tabacum HOM05D005265 ORTHO05D006326 9.5e-63 243.4 131 94.7
Nitab4.5_0002991g0030 Nicotiana tabacum HOM05D005265 ORTHO05D006326 2.1e-62 242.3 131 94.7
Peaxi162Scf00045g02242 Petunia axillaris HOM05D005265 ORTHO05D006326 3.7e-59 231.5 132 91.7
Sopen08g002900 Solanum pennellii HOM05D005265 ORTHO05D006326 8.3e-59 230.3 131 89.3
PGSC0003DMG400020505 Solanum tuberosum HOM05D005265 ORTHO05D006326 1.4e-58 229.6 131 88.5
CAN.G1882.1 Capsicum annuum HOM05D005265 ORTHO05D006326 1.9e-58 229.2 131 88.5
Solyc08g006930.3 Solanum lycopersicum HOM05D005265 ORTHO05D006326 1.9e-58 229.2 131 88.5
Migut.M01877 Erythranthe guttata HOM05D005265 ORTHO05D006326 7.8e-57 223.8 131 87.0
Dinv15893 Davidia involucrata HOM05D005265 ORTHO05D006326 1.3e-56 223.0 131 85.5
MSTRG.7528 Avicennia marina HOM05D005265 ORTHO05D006326 3.0e-56 221.9 133 86.5
Hma1.2p1_0689F.1_g203690 Hydrangea macrophylla HOM05D005265 ORTHO05D006326 3.0e-56 221.9 131 84.7
Hma1.2p1_1418F.1_g282220 Hydrangea macrophylla HOM05D005265 ORTHO05D006326 3.0e-56 221.9 131 84.7
GSVIVG01021584001 Vitis vinifera HOM05D005265 ORTHO05D006326 8.6e-56 220.3 131 86.3
BcaB03g12211 Brassica carinata HOM05D005265 ORTHO05D006326 1.1e-55 219.9 131 84.0
CARHR029770 Cardamine hirsuta HOM05D005265 ORTHO05D006326 1.1e-55 219.9 131 84.0
Oeu040090.1 Olea europaea HOM05D005265 ORTHO05D006326 1.1e-55 219.9 131 84.0
AT1G30380 Arabidopsis thaliana HOM05D005265 ORTHO05D006326 1.5e-55 219.5 131 83.2
Dinv32199 Davidia involucrata HOM05D005265 ORTHO05D006326 1.5e-55 219.5 131 84.0
DCAR_004804 Daucus carota HOM05D005265 ORTHO05D006326 1.9e-55 219.2 131 84.7
Cpa.g.sc17.68 Carica papaya HOM05D005265 ORTHO05D006326 3.3e-55 218.4 131 84.7
THA.LOC104812683 Tarenaya hassleriana HOM05D005265 ORTHO05D006326 4.3e-55 218.0 131 84.0
THA.LOC104814318 Tarenaya hassleriana HOM05D005265 ORTHO05D006326 4.3e-55 218.0 133 85.0
Haze_05746 Corylus avellana HOM05D005265 ORTHO05D006326 5.6e-55 217.6 131 82.4
DCAR_004805 Daucus carota HOM05D005265 ORTHO05D006326 5.6e-55 217.6 131 84.0
SalBow8G5437 Salvia bowleyana HOM05D005265 ORTHO05D006326 7.3e-55 217.2 131 85.5
BcaC01g00188 Brassica carinata HOM05D005265 ORTHO05D006326 1.2e-54 216.5 131 82.4
A08p24490 Brassica napus HOM05D005265 ORTHO05D006326 1.2e-54 216.5 131 82.4
C03p76720 Brassica napus HOM05D005265 ORTHO05D006326 1.2e-54 216.5 131 82.4
BraA08t34405Z Brassica rapa HOM05D005265 ORTHO05D006326 1.2e-54 216.5 131 82.4
HanXRQChr04g0113581 Helianthus annuus HOM05D005265 ORTHO05D006326 1.2e-54 216.5 131 82.4
Lj1g0015817 Lotus japonicus HOM05D005265 ORTHO05D006326 3.6e-54 214.9 131 83.2
arahy.Tifrunner.gnm1.ann1.9042LP Arachis hypogaea HOM05D005265 ORTHO05D006326 4.7e-54 214.5 131 83.2
Sp1g26220 Schrenkiella parvula HOM05D005265 ORTHO05D006326 4.7e-54 214.5 131 81.7
BraA09t39132Z Brassica rapa HOM05D005265 ORTHO05D006326 8.1e-54 213.8 132 82.6
arahy.Tifrunner.gnm1.ann1.ZS1M1K Arachis hypogaea HOM05D005265 ORTHO05D006326 1.1e-53 213.4 131 83.2
COL.COLO4_17668 Corchorus olitorius HOM05D005265 ORTHO05D006326 1.1e-53 213.4 131 81.7
Prupe.4G088200 Prunus persica HOM05D005265 ORTHO05D006326 1.1e-53 213.4 130 84.6
PGR083G1323 Punica granatum HOM05D005265 ORTHO05D006326 1.1e-53 213.4 131 82.4
Cfa000859 Carpinus fangiana HOM05D005265 ORTHO05D006326 1.4e-53 213.0 131 80.9
FAN25G1721 Fragaria x ananassa HOM05D005265 ORTHO05D006326 1.4e-53 213.0 130 84.6
CSS0007721 Camellia sinensis var. sinensis HOM05D005265 ORTHO05D006326 1.8e-53 212.6 132 84.1
CSS0016265 Camellia sinensis var. sinensis HOM05D005265 ORTHO05D006326 1.8e-53 212.6 132 84.1
CANSAT35G0137 Cannabis sativa HOM05D005265 ORTHO05D006326 1.8e-53 212.6 131 82.4
RcHm_v2.0_Chr5g0015361 Rosa chinensis HOM05D005265 ORTHO05D006326 1.8e-53 212.6 130 84.6
BcaC05g27071 Brassica carinata HOM05D005265 ORTHO05D006326 2.3e-53 212.2 132 81.8
A09p36080 Brassica napus HOM05D005265 ORTHO05D006326 2.3e-53 212.2 132 81.8
C05p29330 Brassica napus HOM05D005265 ORTHO05D006326 2.3e-53 212.2 132 81.8
BolC5t31665H Brassica oleracea HOM05D005265 ORTHO05D006326 2.3e-53 212.2 132 81.8
Gohir.D02G238400 Gossypium hirsutum HOM05D005265 ORTHO05D006326 2.3e-53 212.2 132 83.3
Gorai.005G266900 Gossypium raimondii HOM05D005265 ORTHO05D006326 2.3e-53 212.2 132 83.3
Cc09_g08490 Coffea canephora HOM05D005265 ORTHO05D006326 3.1e-53 211.8 131 80.2
FAN16G0550 Fragaria x ananassa HOM05D005265 ORTHO05D006326 3.1e-53 211.8 130 83.8
AL1G44320 Arabidopsis lyrata HOM05D005265 ORTHO05D006326 5.2e-53 211.1 132 81.1
Carub.0001s2858 Capsella rubella HOM05D005265 ORTHO05D006326 5.2e-53 211.1 131 82.4
Thecc.02G010800 Theobroma cacao HOM05D005265 ORTHO05D006326 5.2e-53 211.1 131 81.7
Phvul.009G216400 Phaseolus vulgaris HOM05D005265 ORTHO05D006326 6.8e-53 210.7 131 82.4
VMungo1309G1099 Vigna mungo HOM05D005265 ORTHO05D006326 6.8e-53 210.7 131 82.4
Duzib132G0868 Durio zibethinus HOM05D005265 ORTHO05D006326 8.9e-53 210.3 131 82.4
FvH4_3g09680 Fragaria vesca HOM05D005265 ORTHO05D006326 8.9e-53 210.3 130 83.1
FAN11G2263 Fragaria x ananassa HOM05D005265 ORTHO05D006326 8.9e-53 210.3 130 83.1
ECA236G4370 Erigeron canadensis HOM05D005265 ORTHO05D006326 1.2e-52 209.9 133 81.2
Manes.14G134800 Manihot esculenta HOM05D005265 ORTHO05D006326 1.2e-52 209.9 131 80.9
Glyma.15G194300 Glycine max HOM05D005265 ORTHO05D006326 2.0e-52 209.1 131 81.7
Gohir.A03G216800 Gossypium hirsutum HOM05D005265 ORTHO05D006326 2.0e-52 209.1 132 82.6
Sc24g0001600 Simmondsia chinensis HOM05D005265 ORTHO05D006326 2.0e-52 209.1 131 80.2
CiPaw.09G117100 Carya illinoinensis HOM05D005265 ORTHO05D006326 2.6e-52 208.8 131 80.9
HanXRQChr15g0481551 Helianthus annuus HOM05D005265 ORTHO05D006326 2.6e-52 208.8 131 81.7
SGA_v2.0_scaffold223G42844 Striga asiatica HOM05D005265 ORTHO05D006326 2.6e-52 208.8 131 83.2
TAR626G0103 Trochodendron aralioides HOM05D005265 ORTHO05D006326 2.6e-52 208.8 130 83.1
BcaB07g32648 Brassica carinata HOM05D005265 ORTHO05D006326 3.4e-52 208.4 131 80.9
Thhalv10009090m.g Eutrema salsugineum HOM05D005265 ORTHO05D006326 4.4e-52 208.0 132 81.1
Phvul.002G140800 Phaseolus vulgaris HOM05D005265 ORTHO05D006326 4.4e-52 208.0 131 82.4
CiPaw.10G086700 Carya illinoinensis HOM05D005265 ORTHO05D006326 9.9e-52 206.8 131 79.4
Manes.06G061100 Manihot esculenta HOM05D005265 ORTHO05D006326 9.9e-52 206.8 130 80.8
ClCG01G025030 Citrullus lanatus HOM05D005265 ORTHO05D006326 1.3e-51 206.5 132 81.8
Sed0012654 Sechium edule HOM05D005265 ORTHO05D006326 1.3e-51 206.5 132 84.1
TAR624G1044 Trochodendron aralioides HOM05D005265 ORTHO05D006326 1.3e-51 206.5 131 81.7
TAR626G0742 Trochodendron aralioides HOM05D005265 ORTHO05D006326 1.3e-51 206.5 130 82.3
BolC3t19927H Brassica oleracea HOM05D005265 ORTHO05D006326 1.7e-51 206.1 131 80.9
Ca_12734_v3 Cicer arietinum L. HOM05D005265 ORTHO05D006326 1.7e-51 206.1 132 81.8
Ca_12740_v3 Cicer arietinum L. HOM05D005265 ORTHO05D006326 1.7e-51 206.1 132 81.8
Eucgr.D00234 Eucalyptus grandis HOM05D005265 ORTHO05D006326 2.9e-51 205.3 132 81.1
EL10Ac7g15766 Beta vulgaris HOM05D005265 ORTHO05D006326 3.7e-51 204.9 131 79.4
Duzib248G0887 Durio zibethinus HOM05D005265 ORTHO05D006326 4.9e-51 204.5 131 80.9
Lalb_Chr08g0233241 Lupinus albus HOM05D005265 ORTHO05D006326 4.9e-51 204.5 131 79.4
Sabra18G0029900 Salix brachista HOM05D005265 ORTHO05D006326 4.9e-51 204.5 132 82.6
Aa31LG6G5400 Aethionema arabicum HOM05D005265 ORTHO05D006326 8.4e-51 203.8 132 78.8
QL05p054070 Quercus lobata HOM05D005265 ORTHO05D006326 8.4e-51 203.8 131 78.6
Potri.006G254200 Populus trichocarpa HOM05D005265 ORTHO05D006326 1.4e-50 203.0 134 81.3
MD00G1109700 Malus domestica HOM05D005265 ORTHO05D006326 2.4e-50 202.2 130 80.8
Glyma.09G087700 Glycine max HOM05D005265 ORTHO05D006326 3.2e-50 201.8 134 80.6
Medtr1g026820 Medicago truncatula HOM05D005265 ORTHO05D006326 3.2e-50 201.8 132 80.3
unitig_61.g26080 Utricularia gibba HOM05D005265 ORTHO05D006326 3.2e-50 201.8 129 82.2
Aqoxy4G00026 Aquilegia oxysepala HOM05D005265 ORTHO05D006326 1.2e-49 199.9 130 80.0
AUR62038135 Chenopodium quinoa HOM05D005265 ORTHO05D006326 1.2e-49 199.9 132 80.3
Ciclev10017170m.g Citrus clementina HOM05D005265 ORTHO05D006326 1.2e-49 199.9 129 79.8
Duzib052G0655 Durio zibethinus HOM05D005265 ORTHO05D006326 1.2e-49 199.9 131 78.6
Actinidia13436 Actinidia chinensis HOM05D005265 ORTHO05D006326 2.7e-49 198.7 131 79.4
MD05G1276100 Malus domestica HOM05D005265 ORTHO05D006326 3.5e-49 198.4 134 78.4
CsaV3_6G052210 Cucumis sativus L. HOM05D005265 ORTHO05D006326 4.6e-49 198.0 129 80.6
Potri.018G027600 Populus trichocarpa HOM05D005265 ORTHO05D006326 6.0e-49 197.6 132 80.3
TPR.G24497 Trifolium pratense HOM05D005265 ORTHO05D006326 6.0e-49 197.6 128 81.2
Lsat_1_v5_gn_7_32001 Lactuca sativa HOM05D005265 ORTHO05D006326 7.8e-49 197.2 133 79.7
vmacro03415 Vaccinium macrocarpon HOM05D005265 ORTHO05D006326 7.8e-49 197.2 131 78.6
MELO3C007091.2 Cucumis melo HOM05D005265 ORTHO05D006326 1.0e-48 196.8 132 80.3
Sed0026922 Sechium edule HOM05D005265 ORTHO05D006326 1.7e-48 196.1 133 79.7
TWI09G0405 Tripterygium wilfordii HOM05D005265 ORTHO05D006326 1.7e-48 196.1 132 76.5
Actinidia33666 Actinidia chinensis HOM05D005265 ORTHO05D006326 3.0e-48 195.3 131 77.9
CDE12G0489 Ceratophyllum demersum HOM05D005265 ORTHO05D006326 3.0e-48 195.3 130 76.9
AUR62009823 Chenopodium quinoa HOM05D005265 ORTHO05D006326 3.0e-48 195.3 132 78.8
Atru.chr10.966 Acer truncatum HOM05D005265 ORTHO05D006326 5.1e-48 194.5 131 78.6
CDE01G0641 Ceratophyllum demersum HOM05D005265 ORTHO05D006326 5.1e-48 194.5 130 76.9
TWI73G0862 Tripterygium wilfordii HOM05D005265 ORTHO05D006326 8.6e-48 193.7 132 76.5
PSO541G2745 Papaver somniferum HOM05D005265 ORTHO05D006326 1.1e-47 193.4 130 76.2
PSO675G1042 Papaver somniferum HOM05D005265 ORTHO05D006326 1.1e-47 193.4 130 76.2
MBI02_g44634_MAGBIO Magnolia biondii HOM05D005265 ORTHO05D006326 1.2e-46 189.9 130 76.9
Ah.08g216220 Amaranthus hybridus HOM05D000506 ORTHO05D000369 1.6e-46 189.5 124 77.4
MBI02_g40641_MAGBIO Magnolia biondii HOM05D005265 ORTHO05D006326 1.6e-46 189.5 130 76.9
FAN21G2293 Fragaria x ananassa HOM05D005265 ORTHO05D006326 3.6e-46 188.3 104 91.3
HPP92_019500 Vanilla planifolia HOM05D005265 ORTHO05D006326 1.8e-45 186.0 129 76.7
Rhsim13G0119400 Rhododendron simsii HOM05D005265 ORTHO05D006326 1.2e-44 183.3 131 74.0
Lalb_Chr23g0275991 Lupinus albus HOM05D005265 ORTHO05D006326 1.5e-44 183.0 103 90.3
Hund18717 Selenicereus undatus HOM05D005265 ORTHO05D006326 2.6e-44 182.2 137 70.8
ATR0681G400 Amborella trichopoda HOM05D005265 ORTHO05D006326 7.6e-44 180.6 130 74.6
Psat0s1315g0080 Pisum sativum HOM05D005265 ORTHO05D006326 6.4e-43 177.6 163 62.6
Zm00001eb299990 Zea mays HOM05D005265 ORTHO05D006326 6.0e-41 171.0 130 67.7
Os07g0148900 Oryza sativa ssp. japonica HOM05D005265 ORTHO05D006326 1.3e-40 169.9 124 71.8
Pp3c13_10540 Physcomitrium patens HOM05D005265 ORTHO05D006326 3.9e-40 168.3 126 69.8
Sp4g16930 Schrenkiella parvula HOM05D005265 ORTHO05D006326 5.1e-40 167.9 123 69.9
Pp3c3_10740 Physcomitrium patens HOM05D005265 ORTHO05D006326 7.3e-39 164.1 126 69.0
SEGI_05857 Sequoiadendron giganteum HOM05D005265 ORTHO05D006326 3.6e-38 161.8 124 67.7
Mapoly0125s0033 Marchantia polymorpha HOM05D005265 ORTHO05D006326 6.2e-38 161.0 133 66.2
Nn4g26654 Nelumbo nucifera HOM05D005265 ORTHO05D006326 1.6e-33 146.4 77 97.4
Nn3g20272 Nelumbo nucifera HOM05D005265 ORTHO05D006326 7.9e-33 144.1 127 66.9
Pp3c13_10520 Physcomitrium patens HOM05D005265 ORTHO05D006326 1.0e-32 143.7 132 60.6
AagrBONN_evm.TU.Sc2ySwM_369.184 Anthoceros agrestis HOM05D005265 ORTHO05D006326 5.6e-31 137.9 132 60.6
CBR_g39729 Chara braunii HOM05D005265 ORTHO05D006326 1.3e-24 116.7 116 53.4
SMO358G0410 Selaginella moellendorffii HOM05D005265 ORTHO05D006326 1.8e-24 116.3 78 75.6
Cre17.g724300 Chlamydomonas reinhardtii HOM05D005265 ORTHO05D006326 5.8e-20 101.3 105 52.4
Nn8g40769 Nelumbo nucifera HOM05D005265 ORTHO05D006326 1.3e-16 90.1 66 68.2
RcHm_v2.0_Chr5g0036151 Rosa chinensis HOM05D005265 ORTHO05D006326 3.1e-13 79.0 48 81.2
PRCOL_00005455 Prasinoderma coloniale HOM05D005265 ORTHO05D006326 1.0e-08 63.9 92 41.3
MCO04G068 Micromonas commoda HOM05D005265 ORTHO05D006326 1.3e-08 63.5 78 43.6


User provided reference genes

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