Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 7.0e-47 190.3 96 100.0
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 1.7e-45 185.7 96 96.9
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 6.3e-40 167.2 96 90.6
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 1.2e-38 162.9 96 88.5
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 1.2e-38 162.9 96 88.5
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 4.5e-38 161.0 98 86.7
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 1.6e-35 152.5 98 80.6
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 3.6e-35 151.4 99 79.8
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 8.0e-35 150.2 96 80.2
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 3.1e-34 148.3 95 77.9
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 3.1e-34 148.3 98 77.6
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 3.1e-34 148.3 99 76.8
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 2.0e-33 145.6 96 81.2
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 3.4e-33 144.8 96 77.1
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 4.4e-33 144.4 97 77.3
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 1.3e-32 142.9 96 75.0
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 1.7e-32 142.5 97 78.4
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 2.2e-32 142.1 97 77.3
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 1.4e-31 139.4 97 72.2
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 2.4e-31 138.7 97 72.2
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 2.4e-31 138.7 101 74.3
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 2.4e-31 138.7 99 77.8
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 7.0e-31 137.1 98 70.4
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 7.0e-31 137.1 97 71.1
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 7.0e-31 137.1 94 74.5
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 7.0e-31 137.1 90 76.7
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 9.2e-31 136.7 97 70.1
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 9.2e-31 136.7 97 70.1
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 9.2e-31 136.7 96 72.9
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 9.2e-31 136.7 99 78.8
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.2e-30 136.3 95 75.8
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 1.6e-30 136.0 96 75.0
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.6e-30 136.0 94 73.4
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.6e-30 136.0 94 73.4
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 1.6e-30 136.0 99 70.7
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 2.0e-30 135.6 97 70.1
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 2.0e-30 135.6 97 70.1
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 2.0e-30 135.6 97 70.1
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 2.0e-30 135.6 97 70.1
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.0e-30 135.6 94 73.4
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 2.0e-30 135.6 94 73.4
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 2.0e-30 135.6 95 74.7
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 2.7e-30 135.2 96 74.0
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 2.7e-30 135.2 98 73.5
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 2.7e-30 135.2 97 74.2
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 2.7e-30 135.2 99 72.7
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 3.5e-30 134.8 99 69.7
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 3.5e-30 134.8 96 70.8
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 3.5e-30 134.8 95 72.6
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 3.5e-30 134.8 95 72.6
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 6.0e-30 134.0 95 72.6
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 6.0e-30 134.0 97 69.1
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 6.0e-30 134.0 97 69.1
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 6.0e-30 134.0 97 69.1
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 6.0e-30 134.0 99 74.7
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 7.8e-30 133.7 89 71.9
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 7.8e-30 133.7 97 69.1
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 7.8e-30 133.7 94 72.3
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 1.3e-29 132.9 97 72.2
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 1.3e-29 132.9 96 75.0
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 1.3e-29 132.9 83 77.1
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 1.7e-29 132.5 97 73.2
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 1.7e-29 132.5 97 69.1
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 2.3e-29 132.1 95 73.7
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 3.0e-29 131.7 83 77.1
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 3.0e-29 131.7 95 72.6
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 3.9e-29 131.3 96 74.0
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 3.9e-29 131.3 99 75.8
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 5.0e-29 131.0 97 70.1
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 5.0e-29 131.0 97 72.2
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.5e-28 129.4 101 71.3
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 1.5e-28 129.4 101 71.3
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 1.9e-28 129.0 97 72.2
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 1.9e-28 129.0 97 72.2
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.9e-28 129.0 97 72.2
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 2.5e-28 128.6 97 71.1
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 3.3e-28 128.3 95 68.4
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 9.5e-28 126.7 95 72.6
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 9.5e-28 126.7 95 72.6
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 9.5e-28 126.7 94 73.4
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 2.1e-27 125.6 98 70.4
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 3.6e-27 124.8 101 70.3
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 4.7e-27 124.4 97 68.0
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 6.2e-27 124.0 89 70.8
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 6.2e-27 124.0 97 69.1
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.1e-26 123.2 87 72.4
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 1.8e-26 122.5 98 69.4
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 2.3e-26 122.1 97 67.0
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 4.0e-26 121.3 98 66.3
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 4.0e-26 121.3 97 68.0
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 8.9e-26 120.2 97 70.1
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 1.2e-25 119.8 97 68.0
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 2.0e-25 119.0 97 67.0
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 3.4e-25 118.2 97 64.9
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 4.4e-25 117.9 95 70.5
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 2.2e-24 115.5 93 68.8
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 3.7e-24 114.8 88 62.5
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.1e-23 113.2 100 65.0
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 1.4e-23 112.8 95 66.3
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 4.1e-23 111.3 97 58.8
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 4.1e-23 111.3 100 64.0
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 5.4e-23 110.9 96 61.5
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 9.2e-23 110.2 85 70.6
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 9.2e-23 110.2 85 70.6
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 1.2e-22 109.8 99 59.6
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 2.1e-22 109.0 97 58.8
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 1.0e-21 106.7 93 61.3
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 5.1e-21 104.4 96 58.3
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 6.6e-21 104.0 93 62.4
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 1.5e-20 102.8 97 61.9
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 1.5e-20 102.8 94 63.8
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 1.5e-20 102.8 96 55.2
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 1.2e-19 99.8 85 60.0
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 3.6e-19 98.2 94 56.4
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 8.1e-19 97.1 96 55.2
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 3.1e-18 95.1 90 55.6
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 4.4e-17 91.3 81 63.0
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 7.6e-17 90.5 71 70.4
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 9.9e-17 90.1 71 62.0
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 3.7e-16 88.2 93 52.7
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 5.4e-15 84.3 102 47.1
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 2.1e-14 82.4 87 49.4
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 4.6e-14 81.3 93 44.1
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 6.6e-13 77.4 97 54.6
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 3.3e-12 75.1 103 42.7
Zm00001eb421040 Zea mays HOM05D006087 ORTHO05D007479 4.7e-11 71.2 100 46.0
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 3.8e-08 61.6 85 36.5
MD16G1189100 Malus domestica HOM05D006087 ORTHO05D007479 6.0e-06 54.3 42 59.5


User provided reference genes

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