Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 6.4e-114 414.1 206 100.0
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 5.1e-87 324.7 225 76.0
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 8.2e-77 290.8 208 71.6
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.2e-72 276.9 210 65.2
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.4e-57 226.9 204 54.4
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 4.2e-57 225.3 201 54.2
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 1.4e-55 220.3 213 51.2
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 5.2e-55 218.4 207 52.2
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 8.8e-55 217.6 208 51.4
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 9.7e-54 214.2 209 49.8
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 1.7e-53 213.4 213 48.4
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.2e-53 213.0 213 49.3
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 3.7e-53 212.2 201 50.7
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 4.8e-53 211.8 208 49.5
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 4.8e-53 211.8 208 50.0
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 4.8e-53 211.8 203 50.7
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 4.8e-53 211.8 213 47.9
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 6.3e-53 211.5 222 47.3
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 8.2e-53 211.1 209 49.3
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 1.1e-52 210.7 208 50.0
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 1.4e-52 210.3 208 49.0
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 1.4e-52 210.3 222 48.6
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 1.8e-52 209.9 219 47.5
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 1.8e-52 209.9 210 51.4
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 2.4e-52 209.5 206 49.0
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 5.3e-52 208.4 223 47.5
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 5.3e-52 208.4 213 48.8
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 7.0e-52 208.0 209 51.7
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 1.2e-51 207.2 214 47.7
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 1.6e-51 206.8 212 49.1
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 2.0e-51 206.5 205 50.2
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 2.6e-51 206.1 218 50.5
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 3.5e-51 205.7 219 47.9
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 4.5e-51 205.3 209 50.2
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 4.5e-51 205.3 210 49.0
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 4.5e-51 205.3 210 47.6
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 7.7e-51 204.5 210 51.0
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 1.0e-50 204.1 213 48.8
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 1.3e-50 203.8 214 46.7
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 1.3e-50 203.8 210 47.1
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 1.3e-50 203.8 204 49.0
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 1.7e-50 203.4 205 49.3
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 1.7e-50 203.4 204 51.0
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 2.2e-50 203.0 204 49.5
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 2.9e-50 202.6 185 53.0
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 2.9e-50 202.6 205 47.3
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 2.9e-50 202.6 209 50.2
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 6.5e-50 201.4 211 48.8
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 8.5e-50 201.1 209 48.8
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 8.5e-50 201.1 223 48.0
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 1.5e-49 200.3 203 47.8
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 1.9e-49 199.9 210 48.6
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 2.5e-49 199.5 218 49.5
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 2.5e-49 199.5 209 48.3
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 4.2e-49 198.7 216 46.3
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 5.5e-49 198.4 209 47.8
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 7.2e-49 198.0 222 46.8
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 9.4e-49 197.6 206 49.0
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 9.4e-49 197.6 209 47.8
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 2.1e-48 196.4 204 48.5
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 2.7e-48 196.1 214 47.7
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 4.7e-48 195.3 210 46.7
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 1.8e-47 193.4 209 47.4
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 1.8e-47 193.4 153 67.3
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 2.3e-47 193.0 210 48.1
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 2.3e-47 193.0 203 46.8
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 3.0e-47 192.6 207 47.8
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 3.0e-47 192.6 218 45.9
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 3.0e-47 192.6 203 48.8
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 3.0e-47 192.6 204 48.0
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 5.2e-47 191.8 213 46.0
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 8.8e-47 191.0 207 47.3
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 1.2e-46 190.7 208 46.6
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 1.2e-46 190.7 217 46.1
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 1.5e-46 190.3 214 45.8
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 1.5e-46 190.3 203 47.8
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 2.0e-46 189.9 192 51.0
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 2.6e-46 189.5 214 45.3
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 2.6e-46 189.5 206 47.1
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 3.3e-46 189.1 209 47.4
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 9.7e-46 187.6 205 46.3
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 1.3e-45 187.2 204 45.1
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 1.7e-45 186.8 213 46.5
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 2.2e-45 186.4 209 45.0
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 2.2e-45 186.4 209 45.0
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 2.2e-45 186.4 209 45.0
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 3.7e-45 185.7 202 47.0
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 8.2e-45 184.5 209 44.5
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 1.8e-44 183.3 206 44.7
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 5.3e-44 181.8 202 46.0
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 1.7e-42 176.8 209 46.4
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 1.7e-42 176.8 200 44.5
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 1.1e-41 174.1 194 47.4
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 5.5e-41 171.8 203 44.8
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 1.6e-40 170.2 188 46.8
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 4.7e-40 168.7 200 42.5
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 8.0e-40 167.9 280 36.4
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 2.6e-38 162.9 209 41.6
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 3.4e-38 162.5 200 40.5
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 1.4e-36 157.1 165 47.9
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 1.4e-36 157.1 235 38.7
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 7.7e-35 151.4 210 41.4
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.3e-34 149.8 189 42.3
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 6.5e-34 148.3 144 50.7
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.1e-33 147.5 165 46.7
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 5.5e-33 145.2 172 45.3
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.6e-32 143.7 164 45.7
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 2.8e-32 142.9 166 41.6
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 1.8e-28 130.2 215 32.6
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 1.7e-26 123.6 200 36.5
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 3.8e-26 122.5 146 45.9
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 6.6e-26 121.7 198 36.9
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 3.3e-25 119.4 205 33.2
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 1.8e-23 113.6 176 36.4
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 1.2e-22 110.9 124 44.4
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 5.8e-22 108.6 149 40.3
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.7e-21 107.1 114 49.1
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 5.8e-14 82.0 86 44.2
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 1.1e-09 67.8 79 44.3
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 3.3e-09 66.2 54 61.1
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 1.2e-08 64.3 89 43.8
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 2.0e-06 57.0 55 47.3
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 2.6e-06 56.6 80 42.5
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 9.9e-06 54.7 46 45.7


User provided reference genes

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