Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 2.5e-189 665.2 323 100.0
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 4.9e-169 597.8 309 94.5
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.2e-159 566.6 312 88.1
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 1.7e-158 562.8 309 87.7
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 2.3e-158 562.4 309 88.7
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 1.9e-157 559.3 312 86.5
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 4.2e-144 515.0 312 78.5
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 4.2e-144 515.0 312 78.2
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 2.3e-142 509.2 312 77.6
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 3.9e-142 508.4 312 76.6
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 6.7e-142 507.7 312 74.0
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 6.7e-142 507.7 312 74.4
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 6.7e-142 507.7 312 73.4
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 8.7e-142 507.3 313 78.0
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 1.6e-140 503.1 312 75.6
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 1.6e-140 503.1 312 72.8
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 1.6e-140 503.1 312 76.0
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 1.6e-140 503.1 312 75.3
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 6.2e-140 501.1 309 75.4
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 8.2e-140 500.7 358 67.6
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 1.4e-139 500.0 313 75.1
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 2.4e-139 499.2 312 74.4
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 2.4e-139 499.2 312 74.4
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 2.4e-139 499.2 312 74.0
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 3.1e-139 498.8 312 75.0
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 5.3e-139 498.0 310 73.5
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 1.2e-138 496.9 310 73.5
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 1.5e-138 496.5 313 75.1
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 1.0e-137 493.8 310 72.9
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 1.7e-137 493.0 310 73.9
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 2.2e-137 492.7 312 73.4
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.2e-137 492.7 302 76.5
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 2.2e-137 492.7 302 76.5
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 2.9e-137 492.3 311 73.3
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.1e-136 490.3 312 72.8
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 1.9e-136 489.6 319 73.0
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 3.2e-136 488.8 314 74.2
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 7.1e-136 487.6 313 74.1
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 1.2e-135 486.9 312 73.1
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 1.6e-135 486.5 314 73.6
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 2.1e-135 486.1 312 73.1
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 2.1e-135 486.1 312 72.8
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 2.1e-135 486.1 310 73.2
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 2.7e-135 485.7 314 73.9
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 3.5e-135 485.3 312 73.7
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 6.0e-135 484.6 312 74.0
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 3.0e-134 482.3 314 72.9
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 8.7e-134 480.7 311 71.4
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 8.7e-134 480.7 312 73.4
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 3.3e-133 478.8 312 73.1
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 4.3e-133 478.4 311 71.1
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 1.3e-132 476.9 314 72.6
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 1.3e-132 476.9 311 71.4
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 2.1e-132 476.1 301 74.4
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 2.8e-132 475.7 310 70.6
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 4.8e-132 474.9 312 72.4
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 6.3e-132 474.6 314 72.3
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 6.3e-132 474.6 312 72.8
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 1.8e-131 473.0 311 70.7
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 2.4e-131 472.6 314 72.3
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 2.4e-131 472.6 301 74.1
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 3.1e-131 472.2 301 73.8
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 4.1e-131 471.9 314 72.3
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 4.1e-131 471.9 304 72.4
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 6.9e-131 471.1 312 70.5
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 6.9e-131 471.1 302 72.5
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 9.0e-131 470.7 314 70.7
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 4.5e-130 468.4 312 71.2
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 2.2e-129 466.1 325 70.8
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 2.5e-128 462.6 312 72.4
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 2.1e-127 459.5 312 68.9
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 7.9e-127 457.6 312 70.8
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 5.1e-126 454.9 312 70.2
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 8.7e-126 454.1 312 68.6
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 4.3e-125 451.8 311 67.8
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 2.8e-124 449.1 319 66.8
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 1.8e-123 446.4 312 69.9
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 2.0e-122 443.0 281 71.5
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 2.9e-121 439.1 281 70.8
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 6.5e-121 438.0 312 66.3
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 1.4e-120 436.8 281 70.8
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 3.2e-120 435.6 294 66.7
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.6e-119 433.3 312 67.3
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 7.9e-119 431.0 313 66.8
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 3.9e-118 428.7 304 67.1
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.7e-116 423.3 312 65.1
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 2.7e-111 406.0 312 64.4
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 2.6e-109 399.4 235 78.7
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 3.7e-108 395.6 309 59.5
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 6.3e-108 394.8 309 59.2
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 2.4e-107 392.9 303 65.3
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 2.0e-106 389.8 240 76.2
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 2.0e-106 389.8 312 59.3
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 5.0e-105 385.2 238 75.6
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 1.9e-104 383.3 277 66.1
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 3.2e-104 382.5 239 74.5
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 5.3e-99 365.2 293 58.7
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 3.5e-98 362.5 234 71.8
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 4.5e-98 362.1 290 58.3
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 1.9e-96 356.7 312 58.3
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 8.8e-94 347.8 293 55.3
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 3.7e-92 342.4 301 52.5
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 7.0e-91 338.2 238 68.9
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 1.3e-84 317.4 182 86.3
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 1.1e-80 304.3 202 74.3
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 3.3e-80 302.8 296 50.3
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 1.5e-64 250.8 157 68.8
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 3.1e-62 243.0 144 81.2
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 3.6e-47 193.0 142 60.6
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 2.0e-45 187.2 116 75.9
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 6.0e-42 175.6 115 69.6
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 5.1e-41 172.6 264 38.3
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 1.2e-37 161.4 296 36.5
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 1.4e-30 137.9 291 33.0
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 5.3e-30 136.0 109 53.2
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 3.0e-25 120.2 68 69.1
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 2.8e-23 113.6 82 59.8
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.4e-22 111.3 69 78.3
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.2e-21 108.2 95 60.0
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 7.6e-21 105.5 64 81.2
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 1.0e-20 105.1 117 48.7
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 2.7e-18 97.1 72 62.5
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.2e-10 71.6 42 71.4
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 1.3e-07 61.6 40 65.0
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 6.3e-07 59.3 36 66.7


User provided reference genes

Program Settings