Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001800g0060 Nicotiana tabacum HOM05D007025 ORTHO05D008862 6.1e-51 203.8 96 100.0
Solyc11g066070.2 Solanum lycopersicum HOM05D007025 ORTHO05D008862 4.4e-41 171.0 81 98.8
Sopen11g025810 Solanum pennellii HOM05D007025 ORTHO05D008862 4.4e-41 171.0 81 98.8
PGSC0003DMG400000442 Solanum tuberosum HOM05D007025 ORTHO05D008862 4.4e-41 171.0 81 98.8
Nitab4.5_0004078g0030 Nicotiana tabacum HOM05D007025 ORTHO05D008862 7.5e-41 170.2 81 98.8
CAN.G764.4 Capsicum annuum HOM05D007025 ORTHO05D008862 2.2e-40 168.7 81 96.3
Peaxi162Scf00406g00059 Petunia axillaris HOM05D007025 ORTHO05D008862 3.7e-40 167.9 81 96.3
Solyc06g076010.3 Solanum lycopersicum HOM05D007025 ORTHO05D008862 9.5e-36 153.3 81 87.7
Sopen06g032420 Solanum pennellii HOM05D007025 ORTHO05D008862 9.5e-36 153.3 81 87.7
EL10Ac7g15997 Beta vulgaris HOM05D007025 ORTHO05D008862 1.3e-32 142.9 81 80.2
CSS0049041 Camellia sinensis var. sinensis HOM05D007025 ORTHO05D008862 6.4e-32 140.6 81 77.8
ClCG08G009640 Citrullus lanatus HOM05D007025 ORTHO05D008862 6.4e-32 140.6 81 75.3
Cc01_g12710 Coffea canephora HOM05D007025 ORTHO05D008862 6.4e-32 140.6 81 77.8
TAR374G1462 Trochodendron aralioides HOM05D007025 ORTHO05D008862 3.2e-31 138.3 81 75.3
vmacro00530 Vaccinium macrocarpon HOM05D007025 ORTHO05D008862 4.1e-31 137.9 84 73.8
Sed0024062 Sechium edule HOM05D007025 ORTHO05D008862 7.0e-31 137.1 81 75.3
Thecc.09G323800 Theobroma cacao HOM05D007025 ORTHO05D008862 9.2e-31 136.7 81 75.3
Eucgr.J02059 Eucalyptus grandis HOM05D007025 ORTHO05D008862 1.2e-30 136.3 81 76.5
PGR102G0249 Punica granatum HOM05D007025 ORTHO05D008862 1.6e-30 136.0 81 76.5
MELO3C026555.2 Cucumis melo HOM05D007025 ORTHO05D008862 2.7e-30 135.2 81 74.1
Prupe.6G079900 Prunus persica HOM05D007025 ORTHO05D008862 2.7e-30 135.2 81 74.1
Ciclev10003169m.g Citrus clementina HOM05D007025 ORTHO05D008862 3.5e-30 134.8 81 74.1
SGA_v2.0_scaffold118G32439 Striga asiatica HOM05D007025 ORTHO05D008862 3.5e-30 134.8 82 76.8
CANSAT54G1063 Cannabis sativa HOM05D007025 ORTHO05D008862 6.0e-30 134.0 81 76.5
Gohir.A03G041000 Gossypium hirsutum HOM05D007025 ORTHO05D008862 6.0e-30 134.0 81 76.5
Hma1.2p1_1888F.1_g306550 Hydrangea macrophylla HOM05D007025 ORTHO05D008862 6.0e-30 134.0 81 74.1
Lsat_1_v5_gn_2_83821 Lactuca sativa HOM05D007025 ORTHO05D008862 6.0e-30 134.0 81 71.6
CiPaw.09G091100 Carya illinoinensis HOM05D007025 ORTHO05D008862 7.8e-30 133.7 81 72.8
CsaV3_6G031770 Cucumis sativus L. HOM05D007025 ORTHO05D008862 7.8e-30 133.7 82 70.7
Duzib168G1407 Durio zibethinus HOM05D007025 ORTHO05D008862 7.8e-30 133.7 81 76.5
Gohir.D03G127100 Gossypium hirsutum HOM05D007025 ORTHO05D008862 1.0e-29 133.3 81 75.3
Gorai.003G133500 Gossypium raimondii HOM05D007025 ORTHO05D008862 1.0e-29 133.3 81 75.3
GSVIVG01024988001 Vitis vinifera HOM05D007025 ORTHO05D008862 1.0e-29 133.3 81 72.8
Lsat_1_v5_gn_5_79400 Lactuca sativa HOM05D007025 ORTHO05D008862 1.3e-29 132.9 81 70.4
CiPaw.13G095900 Carya illinoinensis HOM05D007025 ORTHO05D008862 3.0e-29 131.7 82 70.7
Hund04979 Selenicereus undatus HOM05D007025 ORTHO05D008862 8.6e-29 130.2 81 75.3
TWI79G0521 Tripterygium wilfordii HOM05D007025 ORTHO05D008862 1.1e-28 129.8 81 69.1
Aqoxy1G00724 Aquilegia oxysepala HOM05D007025 ORTHO05D008862 1.5e-28 129.4 81 71.6
Rhsim09G0044100 Rhododendron simsii HOM05D007025 ORTHO05D008862 1.9e-28 129.0 81 71.6
arahy.Tifrunner.gnm1.ann1.UND1EB Arachis hypogaea HOM05D007025 ORTHO05D008862 2.5e-28 128.6 81 71.6
Manes.04G033800 Manihot esculenta HOM05D007025 ORTHO05D008862 3.3e-28 128.3 81 71.6
arahy.Tifrunner.gnm1.ann1.XVFR0N Arachis hypogaea HOM05D007025 ORTHO05D008862 5.6e-28 127.5 81 70.4
QL06p002232 Quercus lobata HOM05D007025 ORTHO05D008862 7.3e-28 127.1 80 70.0
CiPaw.14G069900 Carya illinoinensis HOM05D007025 ORTHO05D008862 9.5e-28 126.7 81 69.1
FvH4_3g35770 Fragaria vesca HOM05D007025 ORTHO05D008862 1.2e-27 126.3 81 75.3
FAN11G3513 Fragaria x ananassa HOM05D007025 ORTHO05D008862 1.2e-27 126.3 81 75.3
FAN16G3493 Fragaria x ananassa HOM05D007025 ORTHO05D008862 1.2e-27 126.3 81 75.3
FAN25G2181 Fragaria x ananassa HOM05D007025 ORTHO05D008862 1.2e-27 126.3 81 75.3
QL10p005425 Quercus lobata HOM05D007025 ORTHO05D008862 1.2e-27 126.3 80 70.0
Aqoxy7G01971 Aquilegia oxysepala HOM05D007025 ORTHO05D008862 1.6e-27 125.9 81 69.1
Phvul.002G188200 Phaseolus vulgaris HOM05D007025 ORTHO05D008862 1.6e-27 125.9 81 71.6
Haze_24077 Corylus avellana HOM05D007025 ORTHO05D008862 2.1e-27 125.6 80 71.2
Nn5g26960 Nelumbo nucifera HOM05D007025 ORTHO05D008862 2.1e-27 125.6 82 72.0
RcHm_v2.0_Chr5g0006711 Rosa chinensis HOM05D007025 ORTHO05D008862 2.1e-27 125.6 81 75.3
RcHm_v2.0_Chr5g0063941 Rosa chinensis HOM05D007025 ORTHO05D008862 2.1e-27 125.6 81 75.3
unitig_749.g14331 Utricularia gibba HOM05D007025 ORTHO05D008862 2.1e-27 125.6 81 67.9
Cfa003375 Carpinus fangiana HOM05D007025 ORTHO05D008862 3.6e-27 124.8 81 71.6
Glyma.08G088800 Glycine max HOM05D007025 ORTHO05D008862 3.6e-27 124.8 81 69.1
COL.COLO4_20470 Corchorus olitorius HOM05D007025 ORTHO05D008862 4.7e-27 124.4 81 69.1
Aa31sc152G30 Aethionema arabicum HOM05D007025 ORTHO05D008862 6.2e-27 124.0 81 67.9
Cpa.g.sc840.2 Carica papaya HOM05D007025 ORTHO05D008862 6.2e-27 124.0 81 66.7
FAN21G1635 Fragaria x ananassa HOM05D007025 ORTHO05D008862 8.0e-27 123.6 81 74.1
Glyma.05G134100 Glycine max HOM05D007025 ORTHO05D008862 8.0e-27 123.6 81 67.9
Carub.0001s3607 Capsella rubella HOM05D007025 ORTHO05D008862 1.1e-26 123.2 81 66.7
AL1G53430 Arabidopsis lyrata HOM05D007025 ORTHO05D008862 1.4e-26 122.9 81 67.9
AT1G47278 Arabidopsis thaliana HOM05D007025 ORTHO05D008862 1.4e-26 122.9 81 67.9
CARHR036850 Cardamine hirsuta HOM05D007025 ORTHO05D008862 1.4e-26 122.9 82 68.3
PSO384G2653 Papaver somniferum HOM05D007025 ORTHO05D008862 1.4e-26 122.9 84 65.5
ECA238G2407 Erigeron canadensis HOM05D007025 ORTHO05D008862 1.8e-26 122.5 81 65.4
Migut.C01196 Erythranthe guttata HOM05D007025 ORTHO05D008862 1.8e-26 122.5 81 69.1
Phvul.007G101100 Phaseolus vulgaris HOM05D007025 ORTHO05D008862 2.3e-26 122.1 81 70.4
ATR0800G159 Amborella trichopoda HOM05D007025 ORTHO05D008862 5.2e-26 120.9 79 68.4
THA.LOC104810785 Tarenaya hassleriana HOM05D007025 ORTHO05D008862 5.2e-26 120.9 81 65.4
Lalb_Chr12g0209181 Lupinus albus HOM05D007025 ORTHO05D008862 5.8e-25 117.5 81 66.7
Atru.chr3.3859 Acer truncatum HOM05D007025 ORTHO05D008862 7.5e-25 117.1 81 64.2
Medtr4g094750 Medicago truncatula HOM05D007025 ORTHO05D008862 9.8e-25 116.7 81 64.2
Psat7g087480 Pisum sativum HOM05D007025 ORTHO05D008862 9.8e-25 116.7 81 64.2
Thhalv10011908m.g Eutrema salsugineum HOM05D007025 ORTHO05D008862 1.3e-24 116.3 81 65.4
Lalb_Chr12g0209151 Lupinus albus HOM05D007025 ORTHO05D008862 1.3e-24 116.3 81 66.7
BcaC07g37223 Brassica carinata HOM05D007025 ORTHO05D008862 2.9e-24 115.2 81 65.4
A08p05760 Brassica napus HOM05D007025 ORTHO05D008862 2.9e-24 115.2 81 65.4
C08p06430 Brassica napus HOM05D007025 ORTHO05D008862 2.9e-24 115.2 81 65.4
BraA08t32579Z Brassica rapa HOM05D007025 ORTHO05D008862 2.9e-24 115.2 81 65.4
Sp1g34420 Schrenkiella parvula HOM05D007025 ORTHO05D008862 4.9e-24 114.4 81 65.4
BcaB04g17532 Brassica carinata HOM05D007025 ORTHO05D008862 8.3e-24 113.6 81 64.2
PGSC0003DMG400030317 Solanum tuberosum HOM05D007025 ORTHO05D008862 1.1e-23 113.2 57 87.7
Lj1g0011371 Lotus japonicus HOM05D007025 ORTHO05D008862 2.7e-22 108.6 81 61.7
Lj4g0013158 Lotus japonicus HOM05D007025 ORTHO05D008862 2.7e-22 108.6 81 61.7
CDE11G0504 Ceratophyllum demersum HOM05D007025 ORTHO05D008862 3.5e-22 108.2 81 64.2
SalBow5G5439 Salvia bowleyana HOM05D007025 ORTHO05D008862 5.1e-21 104.4 76 61.8
Lj1A680T12 Lonicera japonica HOM05D007025 ORTHO05D008862 8.6e-21 103.6 58 77.6
Os03g0276700 Oryza sativa ssp. japonica HOM05D007025 ORTHO05D008862 8.6e-21 103.6 79 59.5
TPR.G23830 Trifolium pratense HOM05D007025 ORTHO05D008862 1.5e-20 102.8 79 58.2
Os08g0422300 Oryza sativa ssp. japonica HOM05D007025 ORTHO05D008862 2.5e-20 102.1 79 59.5
SHI05954 Sapria himalayana HOM05D007025 ORTHO05D008862 1.1e-18 96.7 78 51.3
BolC8t47490H Brassica oleracea HOM05D007025 ORTHO05D008862 3.4e-17 91.7 80 57.5
FAN24G0628 Fragaria x ananassa HOM05D007025 ORTHO05D008862 5.8e-17 90.9 63 74.6
MBI05_g06554_MAGBIO Magnolia biondii HOM05D007025 ORTHO05D008862 1.3e-16 89.7 72 52.8
unitig_26.g9279 Utricularia gibba HOM05D007025 ORTHO05D008862 4.9e-16 87.8 57 64.9
MD11G1111500 Malus domestica HOM05D007025 ORTHO05D008862 6.4e-16 87.4 58 72.4
MD02G1271300 Malus domestica HOM05D007025 ORTHO05D008862 1.4e-15 86.3 58 72.4
AUR62001808 Chenopodium quinoa HOM05D002150 ORTHO05D002191 2.4e-15 85.5 47 83.0
AUR62009594 Chenopodium quinoa HOM05D007025 ORTHO05D002191 2.4e-15 85.5 47 83.0
HanXRQChr14g0439311 Helianthus annuus HOM05D007025 ORTHO05D008862 2.4e-15 85.5 79 50.6
Potri.009G029400 Populus trichocarpa HOM05D007025 ORTHO05D008862 4.1e-15 84.7 81 46.9
AagrBONN_evm.TU.Sc2ySwM_344.5329 Anthoceros agrestis HOM05D007025 ORTHO05D008862 6.6e-13 77.4 77 49.4
Mapoly0032s0020 Marchantia polymorpha HOM05D007025 ORTHO05D008862 1.1e-12 76.6 80 46.2
SGA_v2.0_scaffold24G10508 Striga asiatica HOM05D007025 ORTHO05D008862 3.3e-12 75.1 65 58.5
Pp3c21_6850 Physcomitrium patens HOM05D007025 ORTHO05D008862 9.6e-12 73.6 80 45.0
SEGI_34612 Sequoiadendron giganteum HOM05D007025 ORTHO05D008862 2.4e-10 68.9 56 51.8
COL.COLO4_18491 Corchorus olitorius HOM05D007025 ORTHO05D008862 3.1e-10 68.6 77 50.6
FvH4_2g11050 Fragaria vesca HOM05D007025 ORTHO05D008862 3.8e-08 61.6 42 69.0
MD02G1271100 Malus domestica HOM05D007025 ORTHO05D008862 6.4e-08 60.8 45 55.6


User provided reference genes

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