Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001796g0330 Nicotiana tabacum HOM05D008466 ORTHO05D010817 6.6e-87 323.9 156 100.0
Nitab4.5_0000031g0180 Nicotiana tabacum HOM05D008466 ORTHO05D011423 1.2e-69 266.5 149 85.9
Nitab4.5_0008578g0050 Nicotiana tabacum HOM05D008466 ORTHO05D011423 1.7e-58 229.6 156 76.9
Nitab4.5_0010033g0120 Nicotiana tabacum HOM05D008466 ORTHO05D010817 5.1e-55 218.0 155 74.2
Nitab4.5_0002325g0090 Nicotiana tabacum HOM05D008466 ORTHO05D010817 8.7e-55 217.2 121 89.3
Nitab4.5_0014136g0010 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.5e-51 206.5 193 60.6
A04p09550 Brassica napus HOM05D008466 ORTHO05D010817 1.4e-49 199.9 110 90.0
LjContig00315g0013151 Lotus japonicus HOM05D008466 ORTHO05D010817 2.4e-49 199.1 110 90.9
CDE02G0407 Ceratophyllum demersum HOM05D008466 ORTHO05D010817 3.2e-49 198.7 119 85.7
ATMG00285 Arabidopsis thaliana HOM05D008466 ORTHO05D010817 2.7e-40 169.1 100 86.0
BolSC28t60321H Brassica oleracea HOM05D008466 ORTHO05D010817 4.6e-40 168.3 99 85.9
BolSC28t60423H Brassica oleracea HOM05D008466 ORTHO05D010817 4.6e-40 168.3 99 85.9
BraSC48t46287Z Brassica rapa HOM05D008466 ORTHO05D010817 4.6e-40 168.3 99 85.9
BraSC48t46336Z Brassica rapa HOM05D008466 ORTHO05D010817 4.6e-40 168.3 99 85.9
Potri.007G062442 Populus trichocarpa HOM05D008466 ORTHO05D010817 1.3e-39 166.8 99 85.9
Lalb_Chr00c21g0406001 Lupinus albus HOM05D008466 ORTHO05D010817 6.7e-39 164.5 99 85.9
Glyma.01G136900 Glycine max HOM05D008466 ORTHO05D010817 2.5e-38 162.5 99 81.8
SEGI_14764 Sequoiadendron giganteum HOM05D008466 ORTHO05D010817 1.4e-28 130.2 100 69.0
Gorai.001G167700 Gossypium raimondii HOM05D008466 ORTHO05D010817 4.5e-27 125.2 66 92.4
Nitab4.5_0000172g1700 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.9e-25 119.8 66 87.9
Peaxi162Scf00651g00634 Petunia axillaris HOM05D008466 ORTHO05D010817 2.8e-21 105.9 163 42.9
Nitab4.5_0001952g0260 Nicotiana tabacum HOM05D008466 ORTHO05D010817 5.3e-20 101.7 155 44.5
TPR.G7441 Trifolium pratense HOM05D008466 ORTHO05D010817 7.0e-20 101.3 57 89.5
Nitab4.5_0000580g0160 Nicotiana tabacum HOM05D008466 ORTHO05D010817 2.5e-17 92.8 53 84.9
Carub.0006s2655 Capsella rubella HOM05D008466 ORTHO05D010817 3.0e-15 85.9 95 53.7
Medtr2g040780 Medicago truncatula HOM05D008466 ORTHO05D010817 7.4e-14 81.3 45 86.7
VMungo0565G0006 Vigna mungo HOM05D008466 ORTHO05D010817 7.4e-14 81.3 45 86.7
SalBow1G0863 Salvia bowleyana HOM05D008466 ORTHO05D010817 3.7e-13 79.0 45 84.4
arahy.Tifrunner.gnm1.ann1.48KRUQ Arachis hypogaea HOM05D008466 ORTHO05D010817 6.3e-13 78.2 45 84.4
Lalb_Chr00c39g0409011 Lupinus albus HOM05D008466 ORTHO05D010817 6.3e-13 78.2 45 84.4
Lalb_Chr00c39g0409191 Lupinus albus HOM05D008466 ORTHO05D010817 6.3e-13 78.2 45 84.4
Lalb_Chr18g0049571 Lupinus albus HOM05D008466 ORTHO05D010817 6.3e-13 78.2 45 84.4
BraSC48t46301Z Brassica rapa HOM05D008466 ORTHO05D010817 1.4e-12 77.0 45 82.2
CiPaw.11G081100 Carya illinoinensis HOM05D008466 ORTHO05D010817 1.4e-12 77.0 45 82.2
Zm00001eb187490 Zea mays HOM05D008466 ORTHO05D010817 7.0e-12 74.7 44 81.8
Zm00001eb436220 Zea mays HOM05D008466 ORTHO05D010817 7.0e-12 74.7 44 81.8
Zm00001eb436270 Zea mays HOM05D008466 ORTHO05D010817 7.0e-12 74.7 44 81.8
Zm00001eb436350 Zea mays HOM05D008466 ORTHO05D010817 7.0e-12 74.7 44 81.8
Zm00001eb436460 Zea mays HOM05D008466 ORTHO05D010817 7.0e-12 74.7 44 81.8
Zm00001eb436500 Zea mays HOM05D008466 ORTHO05D010817 7.0e-12 74.7 44 81.8
Sopen00g002560 Solanum pennellii HOM05D008923 ORTHO05D011423 4.5e-11 72.0 49 67.3
FAN20G1591 Fragaria x ananassa HOM05D008923 ORTHO05D011423 3.8e-10 68.9 34 85.3
Nitab4.5_0000925g0100 Nicotiana tabacum HOM05D008466 ORTHO05D011423 8.5e-10 67.8 34 82.4
Actinidia34868 Actinidia chinensis HOM05D041439 ORTHO05D011423 7.2e-09 64.7 34 82.4
HanXRQMTg0579461 Helianthus annuus HOM05D008923 ORTHO05D011423 1.2e-08 63.9 34 82.4
SGA_v2.0_scaffold477G52174 Striga asiatica HOM05D008923 ORTHO05D016904 8.0e-08 61.2 35 80.0
VMungo0565G0002 Vigna mungo HOM05D008923 ORTHO05D011423 1.8e-07 60.1 34 79.4
arahy.Tifrunner.gnm1.ann1.5L8EUV Arachis hypogaea HOM05D007099 ORTHO05D009081 6.7e-07 58.2 34 76.5
arahy.Tifrunner.gnm1.ann1.S21A07 Arachis hypogaea HOM05D008923 ORTHO05D011423 6.7e-07 58.2 34 76.5
Mapoly0157s0028 Marchantia polymorpha HOM05D008466 ORTHO05D010817 2.6e-06 56.2 44 65.9
Nitab4.5_0000172g2090 Nicotiana tabacum HOM05D008466 ORTHO05D011423 7.5e-06 54.7 30 76.7


User provided reference genes

Program Settings