Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 5.2e-96 354.4 179 100.0
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 4.9e-86 321.2 207 82.6
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 4.9e-86 321.2 207 82.6
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 4.9e-86 321.2 207 82.6
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 4.9e-86 321.2 207 82.6
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 7.8e-84 313.9 207 80.7
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 6.6e-83 310.8 207 80.7
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 9.6e-82 307.0 207 79.7
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 8.1e-81 303.9 207 79.2
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 1.4e-80 303.1 207 79.2
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 9.0e-80 300.4 207 79.2
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 1.5e-79 299.7 207 79.2
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 1.5e-79 299.7 207 79.2
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 1.5e-79 299.7 207 79.2
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 1.5e-79 299.7 207 79.2
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 1.5e-79 299.7 207 79.2
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 1.5e-79 299.7 207 79.2
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 5.8e-79 297.7 207 77.8
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 1.7e-78 296.2 207 77.8
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 6.4e-78 294.3 207 78.3
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 3.2e-77 292.0 207 76.3
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 3.2e-77 292.0 207 76.3
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 3.5e-76 288.5 162 90.1
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 3.5e-76 288.5 207 75.8
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 6.0e-76 287.7 207 75.8
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 1.3e-75 286.6 207 75.8
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 1.7e-75 286.2 162 89.5
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 3.9e-75 285.0 160 90.0
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 6.6e-75 284.3 207 77.3
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 1.5e-74 283.1 207 74.4
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 1.9e-74 282.7 196 78.1
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 8.1e-73 277.3 207 75.4
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 4.5e-71 271.6 206 72.8
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 6.0e-68 261.2 146 91.1
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.1e-66 256.9 148 87.8
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 2.2e-62 242.7 177 75.1
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 1.1e-61 240.4 146 85.6
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 4.6e-60 235.0 175 74.3
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 9.6e-58 227.3 158 78.5
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 2.6e-55 219.2 207 61.8
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 5.0e-54 214.9 114 94.7
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 6.5e-54 214.5 132 81.1
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 3.2e-45 185.7 99 94.9
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 7.4e-42 174.5 153 64.1
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 2.8e-41 172.6 105 84.8
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 1.4e-40 170.2 99 88.9
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 2.0e-39 166.4 91 92.3
Nn7g37645 Nelumbo nucifera HOM05D008280 ORTHO05D010492 6.5e-38 161.4 85 90.6
MBI09_g03548_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 7.2e-37 157.9 102 79.4
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 2.0e-34 149.8 99 81.8
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 2.2e-33 146.4 87 88.5
HanXRQChr05g0151451 Helianthus annuus HOM05D008280 ORTHO05D010492 5.3e-32 141.7 83 85.5
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 2.7e-28 129.4 144 53.5
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 3.1e-24 115.9 66 87.9
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 9.1e-24 114.4 59 96.6
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 2.9e-22 109.4 67 88.1
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 3.8e-14 82.4 88 59.1
SHI01507 Sapria himalayana HOM05D008280 ORTHO05D010492 1.0e-06 57.8 108 39.8


User provided reference genes

Program Settings