Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001794g0120 Nicotiana tabacum HOM05D007227 ORTHO05D002252 2.6e-64 248.4 117 100.0
Peaxi162Scf00016g00938 Petunia axillaris HOM05D007227 ORTHO05D002252 1.8e-36 156.0 83 81.9
Nitab4.5_0011008g0030 Nicotiana tabacum HOM05D007227 ORTHO05D002252 9.8e-35 150.2 75 93.3
Sopen01g051670 Solanum pennellii HOM05D007227 ORTHO05D002252 9.2e-25 117.1 78 71.8
Peaxi162Scf00003g01323 Petunia axillaris HOM05D007227 ORTHO05D002252 2.4e-17 92.4 113 44.2
FvH4_2g08520 Fragaria vesca HOM05D007227 ORTHO05D002252 1.8e-12 76.3 67 53.7
FAN24G3084 Fragaria x ananassa HOM05D007227 ORTHO05D002252 1.8e-12 76.3 67 53.7
Oeu014341.1 Olea europaea HOM05D007227 ORTHO05D002252 3.1e-12 75.5 68 50.0
LjContig00081g0025580 Lotus japonicus HOM05D007227 ORTHO05D002252 8.9e-12 73.9 90 43.3
Cfa005018 Carpinus fangiana HOM05D007227 ORTHO05D002252 1.5e-11 73.2 95 41.1
Glyma.11G119200 Glycine max HOM05D007227 ORTHO05D002252 1.5e-11 73.2 73 49.3
FAN15G1220 Fragaria x ananassa HOM05D007227 ORTHO05D002252 2.6e-11 72.4 67 50.7
Glyma.12G044400 Glycine max HOM05D007227 ORTHO05D002252 5.8e-11 71.2 73 49.3
MSTRG.27703 Avicennia marina HOM05D007227 ORTHO05D002252 9.9e-11 70.5 82 42.7
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 9.9e-11 70.5 106 41.5
Phvul.011G046400 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 9.9e-11 70.5 65 49.2
Lj3g0002713 Lotus japonicus HOM05D007227 ORTHO05D002252 1.3e-10 70.1 63 50.8
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 1.7e-10 69.7 76 42.1
FAN27G2103 Fragaria x ananassa HOM05D007227 ORTHO05D002252 2.2e-10 69.3 67 47.8
Lsat_1_v5_gn_9_109540 Lactuca sativa HOM05D007227 ORTHO05D002252 2.9e-10 68.9 71 52.1
Cc07_g14570 Coffea canephora HOM05D007227 ORTHO05D002252 3.7e-10 68.6 83 41.0
FAN24G0729 Fragaria x ananassa HOM05D007227 ORTHO05D002252 3.7e-10 68.6 55 56.4
VMungo1127G0518 Vigna mungo HOM05D007227 ORTHO05D002252 3.7e-10 68.6 61 49.2
CiPaw.05G063200 Carya illinoinensis HOM05D007227 ORTHO05D002252 6.4e-10 67.8 66 45.5
MD00G1082000 Malus domestica HOM05D007227 ORTHO05D002252 8.3e-10 67.4 80 41.2
MSTRG.20093 Avicennia marina HOM05D007227 ORTHO05D002252 1.1e-09 67.0 80 47.5
TPR.G9008 Trifolium pratense HOM05D007227 ORTHO05D002252 1.1e-09 67.0 61 45.9
Lj9C368G9 Lonicera japonica HOM05D007227 ORTHO05D002252 1.9e-09 66.2 72 43.1
Glyma.02G300900 Glycine max HOM05D007227 ORTHO05D002252 2.4e-09 65.9 80 41.2
RcHm_v2.0_Chr6g0263881 Rosa chinensis HOM05D007227 ORTHO05D002252 2.4e-09 65.9 60 51.7
MD10G1078100 Malus domestica HOM05D007227 ORTHO05D002252 3.2e-09 65.5 58 48.3
TPR.G38124 Trifolium pratense HOM05D007227 ORTHO05D002252 4.1e-09 65.1 60 46.7
Migut.N01231 Erythranthe guttata HOM05D007227 ORTHO05D002252 5.4e-09 64.7 79 41.8
CiPaw.06G136700 Carya illinoinensis HOM05D007227 ORTHO05D002252 7.1e-09 64.3 59 49.2
Medtr4g069770 Medicago truncatula HOM05D007227 ORTHO05D002252 7.1e-09 64.3 66 45.5
arahy.Tifrunner.gnm1.ann1.16ZZBQ Arachis hypogaea HOM05D007227 ORTHO05D002252 9.2e-09 63.9 70 42.9
Lalb_Chr23g0265441 Lupinus albus HOM05D007227 ORTHO05D002252 1.2e-08 63.5 59 45.8
HanXRQChr16g0505811 Helianthus annuus HOM05D007227 ORTHO05D002252 2.1e-08 62.8 59 49.2
HanXRQChr04g0127891 Helianthus annuus HOM05D007227 ORTHO05D002252 2.7e-08 62.4 59 49.2
SalBow3G1687 Salvia bowleyana HOM05D007227 ORTHO05D002252 2.7e-08 62.4 68 44.1
arahy.Tifrunner.gnm1.ann1.ZTQ30L Arachis hypogaea HOM05D007227 ORTHO05D002252 3.5e-08 62.0 70 42.9
Prupe.8G099800 Prunus persica HOM05D007227 ORTHO05D002252 3.5e-08 62.0 61 49.2
ECA236G1258 Erigeron canadensis HOM05D007227 ORTHO05D002252 4.6e-08 61.6 60 48.3
Glyma.04G013400 Glycine max HOM05D007227 ORTHO05D002252 4.6e-08 61.6 59 47.5
SalBow6G0041 Salvia bowleyana HOM05D007227 ORTHO05D002252 4.6e-08 61.6 59 49.2
SalBow6G1279 Salvia bowleyana HOM05D007227 ORTHO05D002252 4.6e-08 61.6 59 49.2
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 4.6e-08 61.6 88 40.9
Eucgr.I01259 Eucalyptus grandis HOM05D007227 ORTHO05D002252 7.8e-08 60.8 65 41.5
LjContig00081g0009252 Lotus japonicus HOM05D007227 ORTHO05D002252 1.0e-07 60.5 65 43.1
Lj1g0025376 Lotus japonicus HOM05D007227 ORTHO05D002252 1.3e-07 60.1 69 39.1
Lalb_Chr19g0138601 Lupinus albus HOM05D007227 ORTHO05D002252 1.3e-07 60.1 69 40.6
LjContig00272g0019714 Lotus japonicus HOM05D007227 ORTHO05D002252 1.7e-07 59.7 65 40.0
Phvul.009G024600 Phaseolus vulgaris HOM05D007227 ORTHO05D002252 2.3e-07 59.3 72 41.7
CSS0026369 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 3.0e-07 58.9 75 36.0
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 5.1e-07 58.2 65 40.0
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 5.1e-07 58.2 65 40.0
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 5.1e-07 58.2 65 40.0
CSS0037950 Camellia sinensis var. sinensis HOM05D007227 ORTHO05D002252 6.6e-07 57.8 95 34.7
Glyma.06G013300 Glycine max HOM05D007227 ORTHO05D002252 6.6e-07 57.8 69 43.5
Gohir.A01G178500 Gossypium hirsutum HOM05D007227 ORTHO05D002252 6.6e-07 57.8 99 30.3
Gohir.D01G169400 Gossypium hirsutum HOM05D007227 ORTHO05D002252 6.6e-07 57.8 93 30.1
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 6.6e-07 57.8 78 37.2
Psat7g141720 Pisum sativum HOM05D007227 ORTHO05D002252 8.6e-07 57.4 61 39.3
Gorai.002G211000 Gossypium raimondii HOM05D007227 ORTHO05D002252 1.1e-06 57.0 95 31.6
Rhsim11G0174800 Rhododendron simsii HOM05D007227 ORTHO05D002252 1.1e-06 57.0 98 33.7
arahy.Tifrunner.gnm1.ann1.9WD8WJ Arachis hypogaea HOM05D007227 ORTHO05D002252 1.5e-06 56.6 54 44.4
Hma1.2p1_0066F.1_g036590 Hydrangea macrophylla HOM05D007227 ORTHO05D002252 1.9e-06 56.2 57 52.6
arahy.Tifrunner.gnm1.ann1.YB55U6 Arachis hypogaea HOM05D007227 ORTHO05D002252 3.3e-06 55.5 54 42.6
PGR042G2841 Punica granatum HOM05D007227 ORTHO05D002252 3.3e-06 55.5 91 34.1
Thecc.02G037700 Theobroma cacao HOM05D007227 ORTHO05D002252 3.3e-06 55.5 57 43.9
arahy.Tifrunner.gnm1.ann1.24P8DN Arachis hypogaea HOM05D007227 ORTHO05D002252 4.3e-06 55.1 58 41.4
arahy.Tifrunner.gnm1.ann1.BHH580 Arachis hypogaea HOM05D007227 ORTHO05D002252 4.3e-06 55.1 54 42.6
Ciclev10029608m.g Citrus clementina HOM05D007227 ORTHO05D002252 4.3e-06 55.1 95 35.8
Actinidia00511 Actinidia chinensis HOM05D007227 ORTHO05D002252 7.3e-06 54.3 78 33.3
arahy.Tifrunner.gnm1.ann1.3LC685 Arachis hypogaea HOM05D007227 ORTHO05D002252 7.3e-06 54.3 58 43.1
Psat2g007200 Pisum sativum HOM05D007227 ORTHO05D002252 7.3e-06 54.3 60 43.3
PGR142G1531 Punica granatum HOM05D007227 ORTHO05D002252 7.3e-06 54.3 109 33.0
TPR.G8589 Trifolium pratense HOM05D007227 ORTHO05D002252 7.3e-06 54.3 60 40.0
TWI31G0501 Tripterygium wilfordii HOM05D007227 ORTHO05D002252 7.3e-06 54.3 64 39.1
Medtr5g095980 Medicago truncatula HOM05D007227 ORTHO05D002252 9.5e-06 53.9 61 45.9


User provided reference genes

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