Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001788g0230 Nicotiana tabacum HOM05D003666 ORTHO05D004770 3.0e-96 355.1 178 100.0
Solyc00g500187.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.7e-73 278.1 185 81.6
Solyc00g500251.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 4.7e-73 278.1 185 81.6
RcHm_v2.0_MTg0498651 Rosa chinensis HOM05D003666 ORTHO05D004770 9.9e-71 270.4 244 64.8
Nitab4.5_0006085g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 3.8e-62 241.9 193 70.5
Medtr0082s0060 Medicago truncatula HOM05D003666 ORTHO05D004770 8.1e-57 224.2 226 59.7
Aa31csc553G50 Aethionema arabicum HOM05D003666 ORTHO05D004770 2.9e-46 189.1 150 72.0
Nitab4.5_0000172g0090 Nicotiana tabacum HOM05D003666 ORTHO05D004770 3.8e-46 188.7 162 69.1
Solyc00g013180.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 6.4e-46 188.0 100 97.0
Sopen11g018270 Solanum pennellii HOM05D003666 ORTHO05D004770 6.4e-46 188.0 100 97.0
Lj2A1228G69 Lonicera japonica HOM05D003666 ORTHO05D004770 2.4e-45 186.0 100 96.0
unitig_87.g28023 Utricularia gibba HOM05D003666 ORTHO05D004770 7.1e-45 184.5 100 95.0
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 9.3e-45 184.1 100 95.0
CAN.G65.28 Capsicum annuum HOM05D003666 ORTHO05D004770 2.1e-44 183.0 100 95.0
arahy.Tifrunner.gnm1.ann1.DQZY30 Arachis hypogaea HOM05D003666 ORTHO05D004770 7.9e-44 181.0 147 70.7
arahy.Tifrunner.gnm1.ann1.G61VPX Arachis hypogaea HOM05D003666 ORTHO05D004770 7.9e-44 181.0 147 70.7
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 3.9e-43 178.7 100 93.0
AL3G44310 Arabidopsis lyrata HOM05D003666 ORTHO05D004770 8.7e-43 177.6 100 92.0
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 8.7e-43 177.6 100 92.0
Potri.007G061921 Populus trichocarpa HOM05D003666 ORTHO05D004770 8.7e-43 177.6 100 92.0
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 5.6e-42 174.9 100 91.0
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 5.6e-42 174.9 100 91.0
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 5.6e-42 174.9 100 91.0
Gohir.A12G076865 Gossypium hirsutum HOM05D003666 ORTHO05D004770 1.3e-41 173.7 100 89.0
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.6e-41 173.3 100 90.0
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 1.6e-41 173.3 100 90.0
AUR62042334 Chenopodium quinoa HOM05D003666 ORTHO05D004770 1.6e-41 173.3 100 90.0
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 1.6e-41 173.3 100 90.0
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 3.7e-41 172.2 100 89.0
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 4.8e-41 171.8 100 90.0
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 4.8e-41 171.8 100 90.0
Lalb_Chr00c24g0407361 Lupinus albus HOM05D003666 ORTHO05D004770 4.8e-41 171.8 100 90.0
Lalb_Chr01g0010981 Lupinus albus HOM05D003666 ORTHO05D004770 4.8e-41 171.8 100 90.0
Nn1g09940 Nelumbo nucifera HOM05D003666 ORTHO05D004770 1.8e-40 169.9 100 89.0
Nn1g10170 Nelumbo nucifera HOM05D003666 ORTHO05D004770 1.8e-40 169.9 100 89.0
Thhalv10015949m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 2.4e-40 169.5 124 76.6
Lsat_1_v5_gn_3_108200 Lactuca sativa HOM05D003666 ORTHO05D004770 3.1e-40 169.1 100 87.0
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 4.0e-40 168.7 100 88.0
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 6.9e-40 167.9 100 88.0
Gohir.D09G016300 Gossypium hirsutum HOM05D003666 ORTHO05D004770 5.8e-39 164.9 100 87.0
TPR.G18511 Trifolium pratense HOM05D003666 ORTHO05D004770 3.2e-37 159.1 114 77.2
Lalb_Chr06g0172221 Lupinus albus HOM05D003666 ORTHO05D004770 9.3e-37 157.5 100 85.0
Lalb_Chr06g0172341 Lupinus albus HOM05D003666 ORTHO05D004770 9.3e-37 157.5 100 85.0
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.2e-36 157.1 100 81.0
Psat4g185400 Pisum sativum HOM05D003666 ORTHO05D004770 3.3e-34 149.1 100 78.0
SEGI_24024 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 1.2e-31 140.6 101 76.2
SEGI_34311 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 1.2e-31 140.6 101 76.2
arahy.Tifrunner.gnm1.ann1.A5I0RB Arachis hypogaea HOM05D003666 ORTHO05D004770 3.8e-30 135.6 89 80.9
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.1e-26 124.0 100 69.0
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 7.4e-26 121.3 92 77.2
Nitab4.5_0000593g0220 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.2e-25 119.8 58 93.1
Hma1.2p1_0257F.1_g103600 Hydrangea macrophylla HOM05D003666 ORTHO05D004770 4.8e-25 118.6 70 90.0
Peaxi162Scf01767g00002 Petunia axillaris HOM05D003666 ORTHO05D004770 4.1e-24 115.5 62 98.4
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 1.2e-23 114.0 101 56.4
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 1.5e-23 113.6 64 89.1
Peaxi162Scf00147g00311 Petunia axillaris HOM05D003666 ORTHO05D004770 8.5e-22 107.8 55 96.4
SalBow1G6983 Salvia bowleyana HOM05D003666 ORTHO05D004770 9.4e-21 104.4 75 72.0
CDE02G4352 Ceratophyllum demersum HOM05D011521 ORTHO05D043913 7.9e-20 101.3 52 88.5
CAN.G1.7 Capsicum annuum HOM05D003666 ORTHO05D004770 3.7e-17 92.4 49 98.0
Sopen02g001520 Solanum pennellii HOM05D000002 ORTHO05D000001 1.4e-16 90.5 49 81.6
Oeu022812.1 Olea europaea HOM05D003666 ORTHO05D004770 6.9e-16 88.2 71 71.8
CAN.G85.17 Capsicum annuum HOM05D003666 ORTHO05D004770 1.2e-15 87.4 49 93.9
Haze_27149 Corylus avellana HOM05D003666 ORTHO05D004770 2.0e-15 86.7 101 43.6
Lalb_Chr00c54g0413571 Lupinus albus HOM05D003666 ORTHO05D004770 5.9e-15 85.1 48 87.5
Peaxi162Scf00530g00005 Petunia axillaris HOM05D003666 ORTHO05D004770 5.9e-15 85.1 48 93.8
CAN.G1001.36 Capsicum annuum HOM05D003666 ORTHO05D004770 1.0e-14 84.3 49 89.8
MELO3C030345.2 Cucumis melo HOM05D003666 ORTHO05D004770 3.8e-14 82.4 54 81.5
SHI21047 Sapria himalayana HOM05D003666 ORTHO05D004770 3.8e-14 82.4 60 78.3
SMO053G0008 Selaginella moellendorffii HOM05D003666 ORTHO05D004770 8.0e-12 74.7 113 48.7
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 2.0e-10 70.1 100 48.0
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 4.4e-10 68.9 100 38.0
TAR022G0002 Trochodendron aralioides HOM05D003666 ORTHO05D004770 1.6e-07 60.5 66 48.5
Solyc10g045765.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.0e-06 57.8 35 71.4
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 1.7e-06 57.0 98 33.7
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 2.9e-06 56.2 100 35.0
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 2.9e-06 56.2 100 35.0
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 2.9e-06 56.2 98 34.7
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 3.8e-06 55.8 98 32.7
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 6.5e-06 55.1 98 32.7
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 6.5e-06 55.1 98 32.7
SEGI_03857 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 6.5e-06 55.1 50 60.0
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.5e-06 54.7 98 31.6
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.5e-06 54.7 98 31.6
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.5e-06 54.7 98 31.6
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 8.5e-06 54.7 98 32.7


User provided reference genes

Program Settings