Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001781g0140 Nicotiana tabacum HOM05D007060 ORTHO05D009087 8.4e-243 843.2 404 100.0
Nitab4.5_0007799g0060 Nicotiana tabacum HOM05D007060 ORTHO05D009087 1.3e-219 766.1 393 92.9
Solyc11g006560.3 Solanum lycopersicum HOM05D007060 ORTHO05D009087 8.5e-203 710.3 400 84.2
PGSC0003DMG400001998 Solanum tuberosum HOM05D007060 ORTHO05D009087 1.4e-202 709.5 400 84.8
Sopen11g002500 Solanum pennellii HOM05D007060 ORTHO05D009087 1.9e-202 709.1 400 84.0
Peaxi162Scf00725g00056 Petunia axillaris HOM05D007060 ORTHO05D010136 3.2e-202 708.4 396 85.1
CAN.G143.24 Capsicum annuum HOM05D007060 ORTHO05D009087 3.3e-191 671.8 401 81.5
Oeu033276.1 Olea europaea HOM05D007060 ORTHO05D009087 3.7e-190 668.3 401 78.3
Sopen11g002460 Solanum pennellii HOM05D007060 ORTHO05D009087 2.0e-188 662.5 370 84.9
Cc02_g09400 Coffea canephora HOM05D007060 ORTHO05D009087 1.0e-184 650.2 403 75.2
CiPaw.13G043400 Carya illinoinensis HOM05D007060 ORTHO05D009087 6.3e-182 641.0 400 74.2
Sopen11g002480 Solanum pennellii HOM05D007060 ORTHO05D009087 6.3e-182 641.0 361 83.4
Lj3P923T49 Lonicera japonica HOM05D007060 ORTHO05D009087 1.1e-181 640.2 400 74.8
QL04p047886 Quercus lobata HOM05D007060 ORTHO05D009087 1.8e-181 639.4 400 75.0
Potri.008G018200 Populus trichocarpa HOM05D007060 ORTHO05D009087 9.1e-181 637.1 402 74.1
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 3.5e-180 635.2 404 72.5
Atru.chr12.1066 Acer truncatum HOM05D007060 ORTHO05D009087 1.9e-178 629.4 400 71.8
Sabra08G0011800 Salix brachista HOM05D007060 ORTHO05D009087 1.8e-176 622.9 402 72.4
TWI63G0697 Tripterygium wilfordii HOM05D007060 ORTHO05D009087 2.3e-176 622.5 401 71.6
Manes.07G085000 Manihot esculenta HOM05D007060 ORTHO05D009087 3.0e-176 622.1 400 72.2
Thecc.10G116400 Theobroma cacao HOM05D007060 ORTHO05D009087 1.2e-175 620.2 402 71.6
Prupe.4G266300 Prunus persica HOM05D007060 ORTHO05D009087 4.4e-175 618.2 400 70.8
CANSAT56G2168 Cannabis sativa HOM05D007060 ORTHO05D009087 7.5e-175 617.5 403 70.5
Duzib106G1772 Durio zibethinus HOM05D007060 ORTHO05D009087 9.8e-175 617.1 401 70.8
MSTRG.9036 Avicennia marina HOM05D007060 ORTHO05D009087 1.3e-174 616.7 401 72.6
TAR623G0941 Trochodendron aralioides HOM05D007060 ORTHO05D009087 2.8e-174 615.5 403 71.7
Hma1.2p1_0457F.1_g156870 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 3.7e-174 615.1 402 71.6
GSVIVG01034635001 Vitis vinifera HOM05D007060 ORTHO05D009087 1.1e-173 613.6 400 71.0
Ciclev10015484m.g Citrus clementina HOM05D007060 ORTHO05D009087 3.1e-173 612.1 401 72.3
Gorai.N007800 Gossypium raimondii HOM05D007060 ORTHO05D009087 7.7e-172 607.4 401 70.1
CSS0031015 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.7e-171 606.3 401 70.8
CSS0035496 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.3e-171 605.9 401 70.8
Medtr1g090540 Medicago truncatula HOM05D007060 ORTHO05D009087 3.8e-171 605.1 401 71.3
Sed0007060 Sechium edule HOM05D007060 ORTHO05D009087 6.5e-171 604.4 399 69.4
CSS0040116 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 8.6e-171 604.0 401 70.6
Cpa.g.sc54.25 Carica papaya HOM05D007060 ORTHO05D009087 8.6e-171 604.0 399 69.7
MD03G1165900 Malus domestica HOM05D007060 ORTHO05D009087 8.6e-171 604.0 400 70.0
CSS0002387 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.5e-170 603.2 404 70.5
CSS0040194 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.5e-170 603.2 401 70.8
Lj5g0018387 Lotus japonicus HOM05D007060 ORTHO05D009087 1.9e-170 602.8 399 70.9
CSS0035234 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.5e-170 602.4 401 70.8
CSS0037937 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.5e-170 602.4 401 70.8
CSS0014623 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.2e-170 602.1 401 70.8
CSS0046160 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 3.2e-170 602.1 401 70.8
THA.LOC104816472 Tarenaya hassleriana HOM05D007060 ORTHO05D009087 4.2e-170 601.7 399 70.4
Glyma.10G195800 Glycine max HOM05D007060 ORTHO05D009087 5.5e-170 601.3 402 70.1
CSS0037157 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 7.2e-170 600.9 401 70.6
CSS0005765 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 9.5e-170 600.5 401 70.1
COL.COLO4_07825 Corchorus olitorius HOM05D007060 ORTHO05D009087 9.5e-170 600.5 403 69.2
CSS0028923 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 2.1e-169 599.4 401 70.6
Thhalv10020598m.g Eutrema salsugineum HOM05D007060 ORTHO05D009087 2.8e-169 599.0 399 70.4
PGR142G1122 Punica granatum HOM05D007060 ORTHO05D009087 4.7e-169 598.2 403 67.0
TPR.G37861 Trifolium pratense HOM05D007060 ORTHO05D009087 8.0e-169 597.4 402 70.1
CSS0019796 Camellia sinensis var. sinensis HOM05D007060 ORTHO05D009087 1.0e-168 597.0 401 70.1
Migut.F00850 Erythranthe guttata HOM05D007060 ORTHO05D009087 1.0e-168 597.0 401 69.1
RcHm_v2.0_Chr1g0331951 Rosa chinensis HOM05D007060 ORTHO05D009087 1.4e-168 596.7 399 69.4
A01p41570 Brassica napus HOM05D007060 ORTHO05D009087 3.0e-168 595.5 399 71.4
CARHR085210 Cardamine hirsuta HOM05D007060 ORTHO05D009087 1.5e-167 593.2 399 69.4
Nn6g34700 Nelumbo nucifera HOM05D007060 ORTHO05D009087 1.5e-167 593.2 399 70.4
AL3G22100 Arabidopsis lyrata HOM05D007060 ORTHO05D009087 3.4e-167 592.0 399 69.4
Psat6g172000 Pisum sativum HOM05D007060 ORTHO05D009087 7.5e-167 590.9 402 69.4
Sp3g08940 Schrenkiella parvula HOM05D007060 ORTHO05D009087 7.5e-167 590.9 399 69.2
Dinv08415 Davidia involucrata HOM05D007060 ORTHO05D009087 1.3e-166 590.1 355 76.9
Carub.0003s0986 Capsella rubella HOM05D007060 ORTHO05D009087 2.8e-166 589.0 399 68.7
HanXRQChr02g0053541 Helianthus annuus HOM05D007060 ORTHO05D009087 3.7e-166 588.6 402 69.2
BraA01t04232Z Brassica rapa HOM05D007060 ORTHO05D009087 4.9e-166 588.2 399 70.4
ClCG05G021920 Citrullus lanatus HOM05D007060 ORTHO05D009087 8.3e-166 587.4 400 68.2
BolC1t05373H Brassica oleracea HOM05D007060 ORTHO05D009087 1.8e-165 586.3 400 70.2
Ca_10429_v3 Cicer arietinum L. HOM05D007060 ORTHO05D009087 1.8e-165 586.3 395 69.6
MELO3C012336.2 Cucumis melo HOM05D007060 ORTHO05D009087 4.1e-165 585.1 402 68.7
ECA238G3502 Erigeron canadensis HOM05D007060 ORTHO05D009087 1.6e-164 583.2 400 67.2
AT3G10630 Arabidopsis thaliana HOM05D007060 ORTHO05D009087 4.5e-164 581.6 399 67.7
CsaV3_5G035220 Cucumis sativus L. HOM05D007060 ORTHO05D009087 5.9e-164 581.3 406 68.5
Phvul.007G138500 Phaseolus vulgaris HOM05D007060 ORTHO05D009087 1.3e-163 580.1 400 67.5
Aqoxy1G00669 Aquilegia oxysepala HOM05D007060 ORTHO05D009087 5.0e-163 578.2 397 68.5
DCAR_005120 Daucus carota HOM05D007060 ORTHO05D009087 8.6e-163 577.4 366 73.0
Lsat_1_v5_gn_2_105821 Lactuca sativa HOM05D007060 ORTHO05D009087 1.1e-162 577.0 402 67.9
Gohir.D06G177400 Gossypium hirsutum HOM05D007060 ORTHO05D009087 5.6e-162 574.7 374 69.8
VMungo0720G1293 Vigna mungo HOM05D007060 ORTHO05D009087 1.2e-161 573.5 400 66.5
Rhsim03G0096200 Rhododendron simsii HOM05D007060 ORTHO05D009087 1.6e-161 573.2 401 68.3
PGR142G0278 Punica granatum HOM05D007060 ORTHO05D009087 1.8e-160 569.7 403 65.5
unitig_46.g18644 Utricularia gibba HOM05D007060 ORTHO05D009087 5.9e-156 554.7 401 65.3
SalBow1G5690 Salvia bowleyana HOM05D007060 ORTHO05D009087 2.1e-153 546.2 402 66.4
Actinidia03837 Actinidia chinensis HOM05D007060 ORTHO05D009087 8.9e-152 540.8 347 71.8
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 6.4e-150 534.6 404 63.4
Eucgr.G02680 Eucalyptus grandis HOM05D007060 ORTHO05D009087 9.2e-149 530.8 349 70.8
Os09g0296700 Oryza sativa ssp. japonica HOM05D007060 ORTHO05D009087 1.2e-145 520.4 405 62.2
SEGI_33772 Sequoiadendron giganteum HOM05D007060 ORTHO05D009087 2.6e-143 512.7 396 63.4
BcaB04g21186 Brassica carinata HOM05D007060 ORTHO05D009087 2.2e-142 509.6 399 63.2
Zm00001eb309100 Zea mays HOM05D007060 ORTHO05D009087 1.3e-139 500.4 408 59.1
ATR0772G206 Amborella trichopoda HOM05D007060 ORTHO05D009087 8.1e-137 491.1 406 58.6
SMO203G0203 Selaginella moellendorffii HOM05D007060 ORTHO05D009087 6.6e-131 471.5 400 57.2
AagrBONN_evm.TU.Sc2ySwM_344.3615 Anthoceros agrestis HOM05D007060 ORTHO05D009087 5.4e-125 451.8 399 56.6
Lalb_Chr21g0312821 Lupinus albus HOM05D007060 ORTHO05D009087 6.0e-124 448.4 291 72.5
Glyma.20G194300 Glycine max HOM05D007060 ORTHO05D009087 2.9e-110 402.9 353 56.7
SHI22512 Sapria himalayana HOM05D007060 ORTHO05D009087 4.9e-110 402.1 357 57.1
Pp3c6_17860 Physcomitrium patens HOM05D007060 ORTHO05D009087 6.2e-105 385.2 399 50.9
Hma1.2p1_0826F.1_g224930 Hydrangea macrophylla HOM05D007060 ORTHO05D009087 1.3e-89 334.3 209 73.7
CBR_g29369 Chara braunii HOM05D007060 ORTHO05D009087 3.1e-88 329.7 292 54.8
MCO11G427 Micromonas commoda HOM05D007060 ORTHO05D009087 1.1e-82 311.2 429 42.9
Cre02.g118801 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 3.8e-78 296.2 435 39.5
PRCOL_00001658 Prasinoderma coloniale HOM05D007060 ORTHO05D009087 5.5e-69 265.8 463 37.1
TAR625G0310 Trochodendron aralioides HOM05D007060 ORTHO05D009087 2.3e-59 233.8 303 42.6
FvH4_5g28400 Fragaria vesca HOM05D007060 ORTHO05D009087 6.8e-59 232.3 162 64.2
FAN24G3568 Fragaria x ananassa HOM05D007060 ORTHO05D009087 2.6e-58 230.3 399 36.6
HPP92_006362 Vanilla planifolia HOM05D007060 ORTHO05D009087 3.0e-38 163.7 124 60.5
Cre09.g386732 Chlamydomonas reinhardtii HOM05D007060 ORTHO05D009087 1.1e-35 155.2 376 28.7
PRCOL_00006151 Prasinoderma coloniale HOM05D007060 ORTHO05D048979 3.0e-30 137.1 299 32.4
FAN03G2415 Fragaria x ananassa HOM05D007060 ORTHO05D009087 8.1e-28 129.0 93 67.7
MCO05G161 Micromonas commoda HOM05D007060 ORTHO05D048979 4.3e-21 106.7 286 30.1
MBI01_g04536_MAGBIO Magnolia biondii HOM05D007060 ORTHO05D009087 2.6e-18 97.4 67 68.7
AL1G24060 Arabidopsis lyrata HOM05D007060 ORTHO05D023607 1.6e-15 88.2 59 67.8
CBR_g29367 Chara braunii HOM05D007060 ORTHO05D009087 6.0e-07 59.7 79 45.6


User provided reference genes

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