Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001781g0130 Nicotiana tabacum HOM05D001917 ORTHO05D010068 7.5e-145 517.3 288 100.0
Nitab4.5_0009933g0010 Nicotiana tabacum HOM05D001917 ORTHO05D010068 1.1e-116 423.7 308 83.1
PGSC0003DMG400001999 Solanum tuberosum HOM05D001917 ORTHO05D010068 5.6e-116 421.4 307 74.9
Sopen11g002380 Solanum pennellii HOM05D001917 ORTHO05D010068 6.2e-115 417.9 308 74.7
Solyc11g006490.2 Solanum lycopersicum HOM05D001917 ORTHO05D010068 8.1e-115 417.5 308 74.7
Peaxi162Scf00120g01525 Petunia axillaris HOM05D001917 ORTHO05D010068 5.4e-111 404.8 309 73.5
CAN.G143.42 Capsicum annuum HOM05D001917 ORTHO05D010068 9.3e-111 404.1 307 77.5
Dinv08583 Davidia involucrata HOM05D001917 ORTHO05D010068 5.9e-73 278.5 308 52.9
Cc02_g09360 Coffea canephora HOM05D001917 ORTHO05D010068 9.7e-68 261.2 308 51.6
CSS0002594 Camellia sinensis var. sinensis HOM05D001917 ORTHO05D010068 5.3e-66 255.4 308 56.5
Hma1.2p1_0926F.1_g237550 Hydrangea macrophylla HOM05D001917 ORTHO05D010068 6.9e-66 255.0 307 50.5
GSVIVG01034617001 Vitis vinifera HOM05D001917 ORTHO05D010068 7.7e-65 251.5 309 50.2
Oeu009250.1 Olea europaea HOM05D001917 ORTHO05D010068 5.2e-61 238.8 309 49.2
Oeu033274.1 Olea europaea HOM05D001917 ORTHO05D010068 1.5e-60 237.3 309 47.2
Rhsim03G0096000 Rhododendron simsii HOM05D001917 ORTHO05D010068 2.6e-60 236.5 327 47.7
CiPaw.13G043900 Carya illinoinensis HOM05D001917 ORTHO05D010068 6.3e-59 231.9 309 47.6
TAR636G1510 Trochodendron aralioides HOM05D001917 ORTHO05D010068 7.7e-57 224.9 309 52.4
Actinidia34061 Actinidia chinensis HOM05D001917 ORTHO05D010068 1.0e-56 224.6 266 50.4
Ciclev10016047m.g Citrus clementina HOM05D001917 ORTHO05D010068 1.0e-56 224.6 311 46.9
Atru.chr12.1073 Acer truncatum HOM05D001917 ORTHO05D010068 1.3e-56 224.2 308 47.4
Eucgr.J00290 Eucalyptus grandis HOM05D001917 ORTHO05D010068 4.0e-53 212.6 312 44.9
Prupe.2G072200 Prunus persica HOM05D001917 ORTHO05D010068 4.8e-51 205.7 308 43.8
PGR044G0163 Punica granatum HOM05D001917 ORTHO05D010068 4.8e-51 205.7 305 45.9
Potri.008G018400 Populus trichocarpa HOM05D001917 ORTHO05D010068 8.2e-51 204.9 308 42.2
QL04p047945 Quercus lobata HOM05D001917 ORTHO05D010068 4.1e-50 202.6 316 44.9
Cfa010522 Carpinus fangiana HOM05D001917 ORTHO05D010068 7.0e-50 201.8 304 49.7
Potri.010G242800 Populus trichocarpa HOM05D001917 ORTHO05D010068 1.3e-48 197.6 309 47.9
CSS0044781 Camellia sinensis var. sinensis HOM05D001917 ORTHO05D010068 3.8e-48 196.1 185 56.8
Hund22265 Selenicereus undatus HOM05D001917 ORTHO05D010068 6.5e-48 195.3 305 41.6
Migut.F00844 Erythranthe guttata HOM05D001917 ORTHO05D010068 1.9e-47 193.7 307 42.0
Sabra10G0189800 Salix brachista HOM05D001917 ORTHO05D010068 1.8e-45 187.2 241 47.3
AUR62034488 Chenopodium quinoa HOM05D001917 ORTHO05D010068 2.6e-44 183.3 305 40.0
MSTRG.9031 Avicennia marina HOM05D001917 ORTHO05D010068 4.8e-43 179.1 270 43.3
CANSAT56G3891 Cannabis sativa HOM05D001917 ORTHO05D010068 1.1e-42 177.9 307 42.3
vmacro07272 Vaccinium macrocarpon HOM05D001917 ORTHO05D010068 7.0e-42 175.3 333 43.5
AUR62034166 Chenopodium quinoa HOM05D001917 ORTHO05D010068 3.5e-41 172.9 305 38.7
Sc09g0005080 Simmondsia chinensis HOM05D001917 ORTHO05D010068 1.1e-39 167.9 306 37.9
Lj2A35T44 Lonicera japonica HOM05D001917 ORTHO05D010068 3.2e-39 166.4 268 43.3
Hund06808 Selenicereus undatus HOM05D001917 ORTHO05D010068 2.1e-38 163.7 308 39.3
Lsat_1_v5_gn_2_105921 Lactuca sativa HOM05D001917 ORTHO05D010068 5.2e-37 159.1 307 38.1
Sabra08G0012000 Salix brachista HOM05D001917 ORTHO05D010068 5.2e-37 159.1 213 43.7
Ah.04g162550 Amaranthus hybridus HOM05D001917 ORTHO05D010068 1.5e-36 157.5 312 42.3
Haze_03462 Corylus avellana HOM05D001917 ORTHO05D010068 1.5e-36 157.5 315 37.8
Sed0005533 Sechium edule HOM05D001917 ORTHO05D010068 5.7e-36 155.6 281 39.9
Aa31LG11G5870 Aethionema arabicum HOM05D001917 ORTHO05D010068 9.8e-36 154.8 319 38.2
ECA238G0804 Erigeron canadensis HOM05D001917 ORTHO05D010068 1.7e-35 154.1 348 37.1
MELO3C012332.2 Cucumis melo HOM05D001917 ORTHO05D010068 1.8e-34 150.6 248 41.9
Nn6g34689 Nelumbo nucifera HOM05D001917 ORTHO05D010068 5.4e-34 149.1 307 37.1
Sp6g37990 Schrenkiella parvula HOM05D001917 ORTHO05D010068 5.4e-34 149.1 322 37.6
AL6G14500 Arabidopsis lyrata HOM05D001917 ORTHO05D010068 1.6e-33 147.5 320 38.8
AT5G04840 Arabidopsis thaliana HOM05D001917 ORTHO05D010068 2.7e-33 146.7 247 44.5
ClCG05G021960 Citrullus lanatus HOM05D001917 ORTHO05D010068 2.7e-33 146.7 248 42.7
CsaV3_5G035190 Cucumis sativus L. HOM05D001917 ORTHO05D010068 1.0e-32 144.8 252 41.3
HPP92_013376 Vanilla planifolia HOM05D001917 ORTHO05D010068 7.3e-31 138.7 311 34.7
CARHR208440 Cardamine hirsuta HOM05D001917 ORTHO05D010068 1.2e-30 137.9 317 36.9
HanXRQChr02g0053591 Helianthus annuus HOM05D001917 ORTHO05D010068 1.0e-29 134.8 262 38.2
Rhsim03G0095000 Rhododendron simsii HOM05D001917 ORTHO05D010068 2.6e-28 130.2 151 51.7
BolC9t59949H Brassica oleracea HOM05D001917 ORTHO05D010068 4.9e-27 125.9 318 34.3
C09p72040 Brassica napus HOM05D001917 ORTHO05D010068 6.4e-27 125.6 317 34.4
A10p31370 Brassica napus HOM05D001917 ORTHO05D010068 7.0e-26 122.1 319 35.1
BraA10t45183Z Brassica rapa HOM05D001917 ORTHO05D010068 9.2e-26 121.7 319 35.1
Thhalv10014187m.g Eutrema salsugineum HOM05D001917 ORTHO05D010068 1.6e-25 120.9 230 39.6
Cpa.g.sc33.133 Carica papaya HOM05D001917 ORTHO05D010068 2.7e-25 120.2 211 38.9
THA.LOC104816474 Tarenaya hassleriana HOM05D001917 ORTHO05D010068 3.5e-25 119.8 316 33.9
Os02g0538900 Oryza sativa ssp. japonica HOM05D001917 ORTHO05D010068 7.8e-25 118.6 325 33.5
Carub.0006s0372 Capsella rubella HOM05D001917 ORTHO05D010068 1.7e-24 117.5 226 41.6
CDE08G1625 Ceratophyllum demersum HOM05D001917 ORTHO05D010068 6.6e-24 115.5 334 36.2
Zm00001eb243050 Zea mays HOM05D001917 ORTHO05D010068 4.7e-22 109.4 327 31.2
Zm00001eb181550 Zea mays HOM05D001917 ORTHO05D010068 6.2e-22 109.0 325 30.8
BcaC06g32191 Brassica carinata HOM05D001917 ORTHO05D010068 8.0e-22 108.6 292 33.6
ATR0772G184 Amborella trichopoda HOM05D001917 ORTHO05D010068 4.0e-21 106.3 354 27.7
CDE06G0681 Ceratophyllum demersum HOM05D001917 ORTHO05D010068 4.0e-21 106.3 333 33.0
SalBow3G3254 Salvia bowleyana HOM05D001917 ORTHO05D010068 1.7e-19 100.9 308 31.5
Dinv08577 Davidia involucrata HOM05D001917 ORTHO05D010068 7.3e-15 85.5 106 47.2
CSS0005276 Camellia sinensis var. sinensis HOM05D001917 ORTHO05D010068 1.7e-08 64.3 97 64.9
ATR0661G486 Amborella trichopoda HOM05D001917 ORTHO05D002790 3.9e-08 63.2 295 26.8
Duzib052G0052 Durio zibethinus HOM05D001917 ORTHO05D002790 1.5e-07 61.2 90 37.8
MBI04_g14398_MAGBIO Magnolia biondii HOM05D001917 ORTHO05D002790 2.5e-07 60.5 87 40.2
Zm00001eb169130 Zea mays HOM05D001917 ORTHO05D002790 2.5e-07 60.5 98 41.8
PGR142G3237 Punica granatum HOM05D001917 ORTHO05D002790 3.3e-07 60.1 90 38.9
Oeu032112.1 Olea europaea HOM05D001917 ORTHO05D002790 9.5e-07 58.5 92 39.1
PSO170G4920 Papaver somniferum HOM05D001917 ORTHO05D002790 9.5e-07 58.5 288 26.0
PSO782G0466 Papaver somniferum HOM05D001917 ORTHO05D002790 9.5e-07 58.5 288 26.0
THA.LOC104807120 Tarenaya hassleriana HOM05D001917 ORTHO05D002790 9.5e-07 58.5 88 40.9
HPP92_024409 Vanilla planifolia HOM05D001917 ORTHO05D002790 9.5e-07 58.5 106 33.0
VMungo0251G2048 Vigna mungo HOM05D001917 ORTHO05D002790 1.2e-06 58.2 284 27.1
arahy.Tifrunner.gnm1.ann1.AY0SR4 Arachis hypogaea HOM05D001917 ORTHO05D002790 1.6e-06 57.8 88 38.6
MBI11_g44962_MAGBIO Magnolia biondii HOM05D001917 ORTHO05D002790 1.6e-06 57.8 83 41.0
AL6G41210 Arabidopsis lyrata HOM05D001917 ORTHO05D002790 2.1e-06 57.4 96 37.5
ECA240G0453 Erigeron canadensis HOM05D001917 ORTHO05D002790 2.1e-06 57.4 90 41.1
Gohir.D12G026800 Gossypium hirsutum HOM05D001917 ORTHO05D002790 2.1e-06 57.4 88 38.6
Lsat_1_v5_gn_9_120880 Lactuca sativa HOM05D001917 ORTHO05D002790 2.1e-06 57.4 302 32.5
Oeu049833.1 Olea europaea HOM05D001917 ORTHO05D002790 2.1e-06 57.4 111 34.2
Oeu049834.1 Olea europaea HOM05D001917 ORTHO05D002790 2.1e-06 57.4 111 34.2
Carub.0006s2629 Capsella rubella HOM05D001917 ORTHO05D002790 2.8e-06 57.0 92 39.1
vmacro19875 Vaccinium macrocarpon HOM05D001917 ORTHO05D002790 2.8e-06 57.0 87 37.9
Gohir.A12G027400 Gossypium hirsutum HOM05D001917 ORTHO05D002790 3.6e-06 56.6 88 38.6
HPP92_004486 Vanilla planifolia HOM05D001917 ORTHO05D002790 4.7e-06 56.2 102 36.3
CiPaw.05G050800 Carya illinoinensis HOM05D001917 ORTHO05D002790 6.2e-06 55.8 89 36.0
COL.COLO4_11754 Corchorus olitorius HOM05D001917 ORTHO05D002790 6.2e-06 55.8 90 36.7
HanXRQChr03g0065261 Helianthus annuus HOM05D001917 ORTHO05D002790 6.2e-06 55.8 283 27.6
Os12g0194600 Oryza sativa ssp. japonica HOM05D001917 ORTHO05D002790 6.2e-06 55.8 102 37.3
Peaxi162Scf00011g00747 Petunia axillaris HOM05D001917 ORTHO05D002790 6.2e-06 55.8 279 26.5
HPP92_004469 Vanilla planifolia HOM05D001917 ORTHO05D002790 6.2e-06 55.8 63 44.4
AT4G06598 Arabidopsis thaliana HOM05D001917 ORTHO05D002790 8.1e-06 55.5 121 33.1
ClCG11G013420 Citrullus lanatus HOM05D001917 ORTHO05D002790 8.1e-06 55.5 107 37.4
CsaV3_5G029950 Cucumis sativus L. HOM05D001917 ORTHO05D002790 8.1e-06 55.5 107 37.4
Nn3g18937 Nelumbo nucifera HOM05D001917 ORTHO05D002790 8.1e-06 55.5 90 40.0
THA.LOC104816456 Tarenaya hassleriana HOM05D001917 ORTHO05D002790 8.1e-06 55.5 251 28.7


User provided reference genes

Program Settings