Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001780g0030 Nicotiana tabacum HOM05D006478 ORTHO05D008071 2.0e-34 148.7 81 100.0
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 6.4e-25 117.1 74 87.8
Solyc11g006880.3 Solanum lycopersicum HOM05D006478 ORTHO05D008071 4.6e-23 110.9 74 79.7
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 4.6e-23 110.9 74 79.7
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 2.3e-22 108.6 74 77.0
CAN.G1338.3 Capsicum annuum HOM05D006478 ORTHO05D008071 5.0e-22 107.5 72 77.8
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 8.6e-22 106.7 74 74.3
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 6.2e-12 73.9 69 55.1
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 6.2e-12 73.9 68 52.9
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 2.3e-11 72.0 69 52.2
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 5.2e-11 70.9 69 53.6
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 1.2e-10 69.7 69 50.7
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 2.6e-10 68.6 61 54.1
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 1.3e-09 66.2 69 47.8
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 2.2e-09 65.5 38 86.8
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 3.7e-09 64.7 72 48.6
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 4.9e-09 64.3 61 52.5
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 6.4e-09 63.9 66 50.0
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 1.1e-08 63.2 69 43.5
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.4e-08 62.8 66 45.5
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.4e-08 62.8 66 45.5
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 1.4e-08 62.8 69 47.8
Prupe.2G279400 Prunus persica HOM05D006478 ORTHO05D008071 1.9e-08 62.4 68 45.6
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 1.9e-08 62.4 67 41.8
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 2.4e-08 62.0 60 51.7
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 2.4e-08 62.0 74 43.2
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 3.2e-08 61.6 75 45.3
RcHm_v2.0_Chr4g0409771 Rosa chinensis HOM05D006478 ORTHO05D008071 3.2e-08 61.6 68 44.1
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 3.2e-08 61.6 64 46.9
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 4.1e-08 61.2 66 43.9
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 4.1e-08 61.2 66 43.9
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 5.4e-08 60.8 73 46.6
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 5.4e-08 60.8 73 46.6
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 7.1e-08 60.5 68 48.5
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 7.1e-08 60.5 75 45.3
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 9.2e-08 60.1 58 44.8
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 1.2e-07 59.7 68 47.1
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 1.6e-07 59.3 67 49.3
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 2.1e-07 58.9 69 40.6
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 2.1e-07 58.9 68 45.6
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 2.1e-07 58.9 67 46.3
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 2.7e-07 58.5 70 50.0
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 3.5e-07 58.2 70 44.3
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 3.5e-07 58.2 67 40.3
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 4.6e-07 57.8 69 46.4
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 4.6e-07 57.8 57 54.4
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 7.8e-07 57.0 61 45.9
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 1.0e-06 56.6 69 37.7
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 1.3e-06 56.2 67 43.3
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 1.3e-06 56.2 66 42.4
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 1.7e-06 55.8 59 47.5
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 3.9e-06 54.7 64 48.4
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 3.9e-06 54.7 67 44.8
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 5.1e-06 54.3 68 39.7


User provided reference genes

Program Settings