Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001769g0110 Nicotiana tabacum HOM05D004817 ORTHO05D005790 2.4e-34 148.3 74 100.0
Nitab4.5_0000745g0110 Nicotiana tabacum HOM05D004817 ORTHO05D005790 2.4e-31 138.3 74 95.9
PGSC0003DMG400027147 Solanum tuberosum HOM05D004817 ORTHO05D005790 4.6e-30 134.0 75 90.7
CAN.G305.33 Capsicum annuum HOM05D004817 ORTHO05D005790 1.0e-29 132.9 75 89.3
Solyc05g053180.3 Solanum lycopersicum HOM05D004817 ORTHO05D005790 1.3e-29 132.5 75 89.3
Sopen05g031690 Solanum pennellii HOM05D004817 ORTHO05D005790 1.3e-29 132.5 75 89.3
Migut.J01631 Erythranthe guttata HOM05D004817 ORTHO05D005790 2.1e-19 98.6 69 71.0
Lalb_Chr13g0299061 Lupinus albus HOM05D004817 ORTHO05D005790 6.2e-19 97.1 73 65.8
Dinv24730 Davidia involucrata HOM05D004817 ORTHO05D005790 8.1e-19 96.7 69 75.4
Cc03_g00010 Coffea canephora HOM05D004817 ORTHO05D005790 1.1e-18 96.3 70 74.3
Gohir.A01G036400 Gossypium hirsutum HOM05D004817 ORTHO05D005790 1.1e-18 96.3 71 73.2
Nn4g25286 Nelumbo nucifera HOM05D004817 ORTHO05D005790 1.1e-18 96.3 69 73.9
Gohir.D01G023700 Gossypium hirsutum HOM05D004817 ORTHO05D005790 1.4e-18 95.9 70 74.3
Gorai.002G032200 Gossypium raimondii HOM05D004817 ORTHO05D005790 1.4e-18 95.9 70 74.3
PGR031G2777 Punica granatum HOM05D004817 ORTHO05D005790 1.4e-18 95.9 70 74.3
Phvul.003G124400 Phaseolus vulgaris HOM05D004817 ORTHO05D005790 1.8e-18 95.5 70 68.6
SalBow6G6449 Salvia bowleyana HOM05D004817 ORTHO05D005790 1.8e-18 95.5 69 71.0
Atru.chr4.3187 Acer truncatum HOM05D004817 ORTHO05D005790 2.4e-18 95.1 72 72.2
Eucgr.B02200 Eucalyptus grandis HOM05D004817 ORTHO05D005790 2.4e-18 95.1 70 74.3
COL.COLO4_25048 Corchorus olitorius HOM05D004817 ORTHO05D005790 4.0e-18 94.4 69 73.9
PGSC0003DMG400004597 Solanum tuberosum HOM05D004817 ORTHO05D005790 4.0e-18 94.4 67 71.6
Ciclev10007149m.g Citrus clementina HOM05D004817 ORTHO05D005790 5.3e-18 94.0 70 68.6
Solyc12g098880.2 Solanum lycopersicum HOM05D004817 ORTHO05D005790 9.0e-18 93.2 67 70.1
CiPaw.01G127200 Carya illinoinensis HOM05D004817 ORTHO05D005790 1.5e-17 92.4 70 67.1
Sopen12g033630 Solanum pennellii HOM05D004817 ORTHO05D005790 1.5e-17 92.4 67 70.1
QL06p014718 Quercus lobata HOM05D004817 ORTHO05D005790 2.0e-17 92.0 70 68.6
Lalb_Chr08g0232961 Lupinus albus HOM05D004817 ORTHO05D005790 2.6e-17 91.7 69 68.1
Lalb_Chr23g0276121 Lupinus albus HOM05D004817 ORTHO05D005790 2.6e-17 91.7 69 66.7
MD13G1137200 Malus domestica HOM05D004817 ORTHO05D005790 2.6e-17 91.7 69 72.5
Nitab4.5_0000978g0020 Nicotiana tabacum HOM05D004817 ORTHO05D005790 2.6e-17 91.7 69 71.0
Glyma.17G042600 Glycine max HOM05D004817 ORTHO05D005790 3.4e-17 91.3 70 71.4
Peaxi162Scf00323g00924 Petunia axillaris HOM05D004817 ORTHO05D005790 3.4e-17 91.3 69 72.5
Aqoxy5G02845 Aquilegia oxysepala HOM05D004817 ORTHO05D005790 4.5e-17 90.9 69 69.6
Cfa015752 Carpinus fangiana HOM05D004817 ORTHO05D005790 5.8e-17 90.5 69 72.5
Eucgr.H04140 Eucalyptus grandis HOM05D004817 ORTHO05D005790 5.8e-17 90.5 72 72.2
Glyma.13G117300 Glycine max HOM05D004817 ORTHO05D005790 5.8e-17 90.5 70 65.7
Glyma.15G185200 Glycine max HOM05D004817 ORTHO05D005790 5.8e-17 90.5 70 68.6
Manes.03G213500 Manihot esculenta HOM05D004817 ORTHO05D005790 5.8e-17 90.5 70 70.0
Phvul.009G221600 Phaseolus vulgaris HOM05D004817 ORTHO05D005790 5.8e-17 90.5 70 64.3
EL10Ac3g06222 Beta vulgaris HOM05D004817 ORTHO05D005790 9.9e-17 89.7 68 69.1
Duzib151G1168 Durio zibethinus HOM05D004817 ORTHO05D005790 9.9e-17 89.7 70 70.0
Potri.010G004000 Populus trichocarpa HOM05D004817 ORTHO05D005790 1.7e-16 89.0 70 70.0
Lalb_Chr11g0073761 Lupinus albus HOM05D004817 ORTHO05D005790 2.2e-16 88.6 68 67.6
Sabra10G0003400 Salix brachista HOM05D004817 ORTHO05D005790 2.2e-16 88.6 70 70.0
Ca_02320_v3 Cicer arietinum L. HOM05D004817 ORTHO05D005790 2.9e-16 88.2 70 68.6
Nitab4.5_0003998g0090 Nicotiana tabacum HOM05D004817 ORTHO05D005790 2.9e-16 88.2 68 69.1
Oeu022716.1 Olea europaea HOM05D004817 ORTHO05D005790 2.9e-16 88.2 71 67.6
Medtr4g124250 Medicago truncatula HOM05D004817 ORTHO05D005790 3.8e-16 87.8 73 64.4
Psat4g020640 Pisum sativum HOM05D004817 ORTHO05D005790 3.8e-16 87.8 70 62.9
GSVIVG01017708001 Vitis vinifera HOM05D004817 ORTHO05D005790 3.8e-16 87.8 69 72.5
MD16G1133100 Malus domestica HOM05D004817 ORTHO05D005790 4.9e-16 87.4 70 67.1
Glyma.09G077700 Glycine max HOM05D004817 ORTHO05D005790 6.4e-16 87.0 70 64.3
Sed0022538 Sechium edule HOM05D004817 ORTHO05D005790 6.4e-16 87.0 73 61.6
Psat1g016600 Pisum sativum HOM05D004817 ORTHO05D005790 8.4e-16 86.7 70 62.9
TPR.G29237 Trifolium pratense HOM05D004817 ORTHO05D005790 1.4e-15 85.9 70 62.9
Lj6g0012255 Lotus japonicus HOM05D004817 ORTHO05D005790 1.9e-15 85.5 72 66.7
Lalb_Chr12g0200501 Lupinus albus HOM05D004817 ORTHO05D005790 1.9e-15 85.5 70 68.6
PGR004G2302 Punica granatum HOM05D004817 ORTHO05D005790 1.9e-15 85.5 73 65.8
arahy.Tifrunner.gnm1.ann1.XTK2NM Arachis hypogaea HOM05D004817 ORTHO05D005790 2.4e-15 85.1 70 65.7
FvH4_4g21760 Fragaria vesca HOM05D004817 ORTHO05D005790 2.4e-15 85.1 70 67.1
FAN07G2633 Fragaria x ananassa HOM05D004817 ORTHO05D005790 2.4e-15 85.1 70 67.1
FAN12G2725 Fragaria x ananassa HOM05D004817 ORTHO05D005790 2.4e-15 85.1 70 67.1
Prupe.1G208000 Prunus persica HOM05D004817 ORTHO05D005790 2.4e-15 85.1 69 69.6
TPR.G12580 Trifolium pratense HOM05D004817 ORTHO05D005790 2.4e-15 85.1 73 57.5
AL1G54940 Arabidopsis lyrata HOM05D004817 ORTHO05D005790 3.2e-15 84.7 71 62.0
CANSAT25G3847 Cannabis sativa HOM05D004817 ORTHO05D005790 3.2e-15 84.7 74 60.8
PSO761G0543 Papaver somniferum HOM05D004817 ORTHO05D005790 3.2e-15 84.7 69 66.7
Hund12264 Selenicereus undatus HOM05D004817 ORTHO05D005790 3.2e-15 84.7 68 64.7
FAN17G1578 Fragaria x ananassa HOM05D004817 ORTHO05D005790 4.2e-15 84.3 70 67.1
Lj2g0017510 Lotus japonicus HOM05D004817 ORTHO05D005790 4.2e-15 84.3 69 60.9
Medtr2g044940 Medicago truncatula HOM05D004817 ORTHO05D005790 4.2e-15 84.3 70 65.7
RcHm_v2.0_Chr4g0427991 Rosa chinensis HOM05D004817 ORTHO05D005790 5.4e-15 84.0 70 65.7
A05p21090 Brassica napus HOM05D004817 ORTHO05D005790 7.1e-15 83.6 71 60.6
BolC5t32277H Brassica oleracea HOM05D004817 ORTHO05D005790 7.1e-15 83.6 71 60.6
BraA05t21012Z Brassica rapa HOM05D004817 ORTHO05D005790 7.1e-15 83.6 71 60.6
Oeu002212.1 Olea europaea HOM05D004817 ORTHO05D005790 7.1e-15 83.6 70 68.6
arahy.Tifrunner.gnm1.ann1.E7NGHZ Arachis hypogaea HOM05D004817 ORTHO05D005790 9.3e-15 83.2 70 64.3
BcaB06g25835 Brassica carinata HOM05D004817 ORTHO05D005790 9.3e-15 83.2 72 63.9
BcaB07g33764 Brassica carinata HOM05D004817 ORTHO05D005790 9.3e-15 83.2 71 60.6
Carub.0003s1729 Capsella rubella HOM05D004817 ORTHO05D005790 1.2e-14 82.8 72 62.5
Sed0023994 Sechium edule HOM05D004817 ORTHO05D005790 1.2e-14 82.8 71 60.6
BcaC05g27577 Brassica carinata HOM05D004817 ORTHO05D005790 2.1e-14 82.0 71 59.2
BcaC08g43030 Brassica carinata HOM05D004817 ORTHO05D005790 2.1e-14 82.0 71 59.2
C05p35610 Brassica napus HOM05D004817 ORTHO05D005790 2.1e-14 82.0 71 59.2
C06p02830 Brassica napus HOM05D004817 ORTHO05D005790 2.1e-14 82.0 71 59.2
BolC6t35412H Brassica oleracea HOM05D004817 ORTHO05D005790 2.1e-14 82.0 71 59.2
Thecc.04G314800 Theobroma cacao HOM05D004817 ORTHO05D005790 2.1e-14 82.0 76 61.8
TAR362G1300 Trochodendron aralioides HOM05D004817 ORTHO05D005790 2.1e-14 82.0 70 64.3
AL3G30650 Arabidopsis lyrata HOM05D004817 ORTHO05D005790 2.7e-14 81.6 74 60.8
DCAR_002559 Daucus carota HOM05D004817 ORTHO05D005790 2.7e-14 81.6 76 55.3
Thhalv10011909m.g Eutrema salsugineum HOM05D004817 ORTHO05D005790 2.7e-14 81.6 71 59.2
Lj4g0003186 Lotus japonicus HOM05D004817 ORTHO05D005790 2.7e-14 81.6 71 57.7
Lalb_Chr07g0181551 Lupinus albus HOM05D004817 ORTHO05D005790 2.7e-14 81.6 70 62.9
unitig_746.g26894 Utricularia gibba HOM05D004817 ORTHO05D005790 2.7e-14 81.6 69 59.4
BcaC05g28773 Brassica carinata HOM05D004817 ORTHO05D005790 3.5e-14 81.3 75 60.0
Aa31LG10G5430 Aethionema arabicum HOM05D004817 ORTHO05D005790 4.6e-14 80.9 74 58.1
A05p32270 Brassica napus HOM05D004817 ORTHO05D005790 4.6e-14 80.9 75 60.0
BraA05t22056Z Brassica rapa HOM05D004817 ORTHO05D005790 4.6e-14 80.9 75 60.0
BraA06t23656Z Brassica rapa HOM05D004817 ORTHO05D005790 4.6e-14 80.9 71 59.2
Aqoxy2G02458 Aquilegia oxysepala HOM05D004817 ORTHO05D005790 6.0e-14 80.5 71 60.6
AT3G17580 Arabidopsis thaliana HOM05D004817 ORTHO05D005790 7.9e-14 80.1 74 59.5
BcaC07g37143 Brassica carinata HOM05D004817 ORTHO05D005790 7.9e-14 80.1 71 59.2
A08p04790 Brassica napus HOM05D004817 ORTHO05D005790 7.9e-14 80.1 71 59.2
C08p05160 Brassica napus HOM05D004817 ORTHO05D005790 7.9e-14 80.1 71 59.2
BraA08t32509Z Brassica rapa HOM05D004817 ORTHO05D005790 7.9e-14 80.1 71 59.2
CARHR092890 Cardamine hirsuta HOM05D004817 ORTHO05D005790 7.9e-14 80.1 70 60.0
Thhalv10022414m.g Eutrema salsugineum HOM05D004817 ORTHO05D005790 7.9e-14 80.1 75 60.0
Cpa.g.sc146.7 Carica papaya HOM05D004817 ORTHO05D005790 1.0e-13 79.7 78 60.3
Sp3g15710 Schrenkiella parvula HOM05D004817 ORTHO05D005790 1.0e-13 79.7 75 60.0
C05p48800 Brassica napus HOM05D004817 ORTHO05D005790 1.3e-13 79.3 75 58.7
BolC5t33617H Brassica oleracea HOM05D004817 ORTHO05D005790 1.3e-13 79.3 75 58.7
Sp1g35290 Schrenkiella parvula HOM05D004817 ORTHO05D005790 1.3e-13 79.3 71 59.2
BcaB04g17438 Brassica carinata HOM05D004817 ORTHO05D005790 1.8e-13 79.0 71 59.2
DCAR_023420 Daucus carota HOM05D004817 ORTHO05D005790 1.8e-13 79.0 70 62.9
Aa31LG8G4450 Aethionema arabicum HOM05D004817 ORTHO05D005790 2.3e-13 78.6 78 56.4
ClCG05G006950 Citrullus lanatus HOM05D004817 ORTHO05D005790 2.3e-13 78.6 73 56.2
DCAR_026926 Daucus carota HOM05D004817 ORTHO05D005790 2.3e-13 78.6 71 63.4
MBI18_g46513_MAGBIO Magnolia biondii HOM05D004817 ORTHO05D005790 2.3e-13 78.6 69 63.8
BcaC09g48714 Brassica carinata HOM05D004817 ORTHO05D005790 3.0e-13 78.2 75 58.7
CARHR037950 Cardamine hirsuta HOM05D004817 ORTHO05D005790 3.0e-13 78.2 71 57.7
BcaB04g18952 Brassica carinata HOM05D004817 ORTHO05D005790 3.9e-13 77.8 75 58.7
BcaB04g20835 Brassica carinata HOM05D004817 ORTHO05D005790 3.9e-13 77.8 76 57.9
BcaC01g03751 Brassica carinata HOM05D004817 ORTHO05D005790 3.9e-13 77.8 75 58.7
A03p40250 Brassica napus HOM05D004817 ORTHO05D005790 3.9e-13 77.8 75 58.7
C03p48950 Brassica napus HOM05D004817 ORTHO05D005790 3.9e-13 77.8 75 58.7
BolC3t17174H Brassica oleracea HOM05D004817 ORTHO05D005790 3.9e-13 77.8 75 58.7
BraA03t13178Z Brassica rapa HOM05D004817 ORTHO05D005790 3.9e-13 77.8 75 58.7
DCAR_030417 Daucus carota HOM05D004817 ORTHO05D005790 3.9e-13 77.8 81 58.0
AT1G48330 Arabidopsis thaliana HOM05D004817 ORTHO05D005790 8.7e-13 76.6 71 59.2
A01p36770 Brassica napus HOM05D004817 ORTHO05D005790 8.7e-13 76.6 76 57.9
BraA01t03738Z Brassica rapa HOM05D004817 ORTHO05D005790 8.7e-13 76.6 76 57.9
MBI18_g40079_MAGBIO Magnolia biondii HOM05D004817 ORTHO05D005790 8.7e-13 76.6 69 59.4
Carub.0001s3746 Capsella rubella HOM05D004817 ORTHO05D005790 1.9e-12 75.5 74 58.1
THA.LOC104821815 Tarenaya hassleriana HOM05D004817 ORTHO05D005790 3.3e-12 74.7 68 61.8
CsaV3_3G015620 Cucumis sativus L. HOM05D004817 ORTHO05D005790 7.4e-12 73.6 67 61.2
CDE02G4689 Ceratophyllum demersum HOM05D004817 ORTHO05D005790 2.1e-11 72.0 69 52.2
unitig_21.g20684 Utricularia gibba HOM05D004817 ORTHO05D005790 2.8e-11 71.6 69 56.5
unitig_744.g24175 Utricularia gibba HOM05D004817 ORTHO05D005790 6.2e-11 70.5 71 52.1
CANSAT78G0586 Cannabis sativa HOM05D004817 ORTHO05D005790 1.4e-10 69.3 82 51.2
arahy.Tifrunner.gnm1.ann1.WNQ9XL Arachis hypogaea HOM05D004817 ORTHO05D005790 2.4e-10 68.6 75 52.0
CDE08G0719 Ceratophyllum demersum HOM05D004817 ORTHO05D005790 4.0e-10 67.8 67 50.7
Eucgr.H01515 Eucalyptus grandis HOM05D004817 ORTHO05D005790 4.0e-10 67.8 78 51.3
Haze_00750 Corylus avellana HOM05D004817 ORTHO05D005790 6.9e-10 67.0 59 64.4
Zm00001eb129600 Zea mays HOM05D004817 ORTHO05D005790 1.5e-09 65.9 80 52.5
arahy.Tifrunner.gnm1.ann1.V5CRDX Arachis hypogaea HOM05D004817 ORTHO05D005790 2.6e-09 65.1 77 49.4
Zm00001eb332330 Zea mays HOM05D004817 ORTHO05D005790 2.6e-09 65.1 77 49.4
ATR0796G174 Amborella trichopoda HOM05D004817 ORTHO05D005790 2.2e-08 62.0 65 52.3
Os01g0288200 Oryza sativa ssp. japonica HOM05D004817 ORTHO05D005790 4.2e-07 57.8 73 47.9


User provided reference genes

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