Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 2.6e-147 525.4 268 100.0
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 3.6e-141 505.0 268 95.5
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 1.9e-118 429.5 290 79.3
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 1.1e-116 423.7 289 77.9
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.6e-101 373.2 241 81.7
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 2.1e-93 346.3 266 67.7
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 1.1e-92 344.0 280 65.0
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 1.1e-92 344.0 272 65.8
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 2.4e-92 342.8 285 63.9
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 6.9e-92 341.3 267 64.8
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 1.2e-91 340.5 273 64.8
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 2.6e-91 339.3 264 66.3
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 2.6e-91 339.3 267 66.3
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 3.4e-91 339.0 267 66.3
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 2.9e-90 335.9 265 64.5
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 6.4e-90 334.7 264 65.2
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 6.4e-90 334.7 271 63.8
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 8.4e-90 334.3 265 64.5
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.4e-89 333.6 264 64.4
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 2.4e-89 332.8 277 64.3
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 3.2e-89 332.4 278 62.6
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 5.4e-89 331.6 284 62.0
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 5.4e-89 331.6 283 60.4
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 9.3e-89 330.9 272 64.0
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 9.3e-89 330.9 278 61.5
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 1.2e-88 330.5 264 64.0
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 1.2e-88 330.5 281 61.9
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 1.6e-88 330.1 268 64.2
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 2.1e-88 329.7 267 64.8
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 2.7e-88 329.3 266 63.2
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 2.7e-88 329.3 276 63.0
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 2.7e-88 329.3 273 61.9
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 4.6e-88 328.6 274 63.5
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 6.0e-88 328.2 264 62.9
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 6.0e-88 328.2 282 59.6
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 7.8e-88 327.8 276 62.0
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 7.8e-88 327.8 270 62.6
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 7.8e-88 327.8 273 61.5
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 1.3e-87 327.0 276 60.5
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 1.3e-87 327.0 268 62.7
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 3.9e-87 325.5 267 61.0
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.9e-87 325.5 266 62.0
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 6.6e-87 324.7 268 61.6
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 6.6e-87 324.7 267 63.7
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 8.7e-87 324.3 273 60.8
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.9e-86 323.2 266 62.0
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 1.9e-86 323.2 275 60.4
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 3.3e-86 322.4 268 61.9
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 3.3e-86 322.4 271 62.4
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 5.6e-86 321.6 266 62.0
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 2.1e-85 319.7 267 61.0
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 2.4e-84 316.2 267 59.9
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 2.4e-84 316.2 277 58.8
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 4.0e-84 315.5 267 60.3
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 4.0e-84 315.5 336 52.4
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 5.3e-84 315.1 268 59.7
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 1.5e-83 313.5 267 60.7
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.5e-83 313.5 266 60.5
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 2.0e-83 313.2 265 59.6
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 2.6e-83 312.8 268 59.7
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 5.8e-83 311.6 270 60.4
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 7.6e-83 311.2 267 59.9
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 9.9e-83 310.8 275 59.6
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 1.3e-82 310.5 268 59.7
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 1.3e-82 310.5 268 59.7
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 2.2e-82 309.7 268 59.3
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 2.2e-82 309.7 269 59.5
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 6.4e-82 308.1 267 59.2
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.1e-81 307.4 276 59.8
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.4e-81 307.0 268 60.8
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 5.4e-81 305.1 264 61.4
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 7.1e-81 304.7 271 58.7
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 7.1e-81 304.7 275 57.8
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 1.6e-80 303.5 270 59.3
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 2.1e-80 303.1 276 58.3
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 2.7e-80 302.8 271 58.3
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 2.7e-80 302.8 267 59.6
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 3.5e-80 302.4 269 59.1
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 1.8e-79 300.1 257 61.5
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 3.0e-79 299.3 271 57.6
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 5.1e-79 298.5 267 58.1
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 5.1e-79 298.5 271 57.9
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 6.7e-79 298.1 281 56.2
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 1.9e-78 296.6 281 56.6
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 2.5e-78 296.2 239 66.9
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 3.3e-78 295.8 243 65.4
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 5.6e-78 295.0 268 60.1
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 9.6e-78 294.3 296 55.1
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 4.8e-77 292.0 276 56.2
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 4.5e-75 285.4 225 67.1
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 4.5e-75 285.4 267 56.2
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 4.5e-75 285.4 391 44.2
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 7.6e-75 284.6 271 55.0
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 3.8e-74 282.3 273 54.2
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 6.4e-74 281.6 262 59.9
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 5.5e-73 278.5 232 63.8
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 9.3e-73 277.7 241 61.0
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 8.7e-71 271.2 264 54.5
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 1.8e-68 263.5 232 59.1
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 4.0e-68 262.3 244 56.6
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 5.5e-65 251.9 223 59.2
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.4e-60 236.5 270 49.6
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 1.0e-58 231.1 267 47.9
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 2.5e-54 216.5 189 65.1
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 4.5e-51 205.7 130 86.2
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 9.4e-49 198.0 234 45.3
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 1.5e-46 190.7 161 67.1
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 7.7e-43 178.3 148 64.2
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 1.0e-42 177.9 183 54.6
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.2e-41 172.6 118 66.1
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 5.7e-38 162.2 220 44.1
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 4.8e-37 159.1 121 67.8
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 4.2e-33 146.0 145 50.3
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 9.4e-33 144.8 214 41.6
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.5e-30 137.5 81 91.4
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 6.3e-29 132.1 114 61.4
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 1.8e-28 130.6 187 44.9
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.9e-25 120.6 128 58.6
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 8.8e-23 111.7 248 32.7
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.2e-22 111.3 148 46.6
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.5e-17 93.6 80 61.2
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 3.6e-08 63.2 45 66.7


User provided reference genes

Program Settings