Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001763g0020 Nicotiana tabacum HOM05D007265 ORTHO05D009118 6.5e-28 126.7 66 100.0
CAN.G1415.20 Capsicum annuum HOM05D007265 ORTHO05D009118 8.0e-26 119.8 66 92.4
PGSC0003DMG400000233 Solanum tuberosum HOM05D007265 ORTHO05D009118 8.0e-26 119.8 64 96.9
Solyc01g096090.4 Solanum lycopersicum HOM05D007265 ORTHO05D009118 1.0e-25 119.4 66 95.5
Sopen01g039810 Solanum pennellii HOM05D007265 ORTHO05D009118 1.0e-25 119.4 66 95.5
DCAR_005402 Daucus carota HOM05D007265 ORTHO05D009118 3.0e-25 117.9 66 90.9
Duzib138G0325 Durio zibethinus HOM05D007265 ORTHO05D009118 5.2e-25 117.1 66 92.4
DCAR_025264 Daucus carota HOM05D007265 ORTHO05D009118 6.8e-25 116.7 66 92.4
Nn1g00287 Nelumbo nucifera HOM05D007265 ORTHO05D009118 6.8e-25 116.7 64 93.8
Prupe.2G190600 Prunus persica HOM05D007265 ORTHO05D009118 8.8e-25 116.3 63 95.2
Nitab4.5_0000258g0270 Nicotiana tabacum HOM05D007265 ORTHO05D009118 1.2e-24 115.9 66 89.4
Gohir.A11G097900 Gossypium hirsutum HOM05D007265 ORTHO05D009118 2.0e-24 115.2 66 90.9
Gohir.D11G102600 Gossypium hirsutum HOM05D007265 ORTHO05D009118 2.0e-24 115.2 66 90.9
Nitab4.5_0003865g0020 Nicotiana tabacum HOM05D007265 ORTHO05D009118 2.0e-24 115.2 64 92.2
Hma1.2p1_0390F.1_g142620 Hydrangea macrophylla HOM05D007265 ORTHO05D009118 2.6e-24 114.8 64 93.8
CSS0038215 Camellia sinensis var. sinensis HOM05D007265 ORTHO05D009118 3.4e-24 114.4 66 89.4
MD01G1083600 Malus domestica HOM05D007265 ORTHO05D009118 5.7e-24 113.6 63 93.7
MD07G1152300 Malus domestica HOM05D007265 ORTHO05D009118 5.7e-24 113.6 63 93.7
Lj7E499T0 Lonicera japonica HOM05D007265 ORTHO05D009118 7.5e-24 113.2 66 87.9
CiPaw.01G077600 Carya illinoinensis HOM05D007265 ORTHO05D009118 9.8e-24 112.8 63 93.7
Gohir.D12G116700 Gossypium hirsutum HOM05D007265 ORTHO05D009118 1.3e-23 112.5 66 87.9
Ciclev10023834m.g Citrus clementina HOM05D007265 ORTHO05D009118 2.2e-23 111.7 64 89.1
Cc02_g39560 Coffea canephora HOM05D007265 ORTHO05D009118 4.8e-23 110.5 63 90.5
Duzib133G0073 Durio zibethinus HOM05D007265 ORTHO05D009118 4.8e-23 110.5 66 87.9
Gohir.A12G113200 Gossypium hirsutum HOM05D007265 ORTHO05D009118 4.8e-23 110.5 66 86.4
PGR042G1917 Punica granatum HOM05D007265 ORTHO05D009118 6.3e-23 110.2 66 86.4
Oeu008708.1 Olea europaea HOM05D007265 ORTHO05D009118 8.3e-23 109.8 64 85.9
Thecc.01G340400 Theobroma cacao HOM05D007265 ORTHO05D009118 8.3e-23 109.8 66 87.9
TAR374G1528 Trochodendron aralioides HOM05D007265 ORTHO05D009118 8.3e-23 109.8 61 91.8
Atru.chr5.686 Acer truncatum HOM05D007265 ORTHO05D009118 1.4e-22 109.0 63 88.9
ATR0602G127 Amborella trichopoda HOM05D007265 ORTHO05D009118 1.4e-22 109.0 64 87.5
HanXRQChr13g0423241 Helianthus annuus HOM05D007265 ORTHO05D009118 1.4e-22 109.0 64 85.9
GSVIVG01027169001 Vitis vinifera HOM05D007265 ORTHO05D009118 1.8e-22 108.6 66 84.8
HanXRQChr03g0093001 Helianthus annuus HOM05D007265 ORTHO05D009118 4.1e-22 107.5 63 85.7
Sed0002056 Sechium edule HOM05D007265 ORTHO05D009118 5.4e-22 107.1 63 85.7
Glyma.03G258500 Glycine max HOM05D007265 ORTHO05D009118 7.0e-22 106.7 63 84.1
Glyma.19G257100 Glycine max HOM05D007265 ORTHO05D009118 7.0e-22 106.7 63 84.1
PSO063G4371 Papaver somniferum HOM05D007265 ORTHO05D009118 7.0e-22 106.7 64 84.4
Phvul.006G114500 Phaseolus vulgaris HOM05D007265 ORTHO05D009118 9.1e-22 106.3 63 84.1
PSO170G4391 Papaver somniferum HOM05D007265 ORTHO05D009118 1.2e-21 105.9 64 84.4
arahy.Tifrunner.gnm1.ann1.PH1UFL Arachis hypogaea HOM05D007265 ORTHO05D009118 1.6e-21 105.5 60 88.3
arahy.Tifrunner.gnm1.ann1.4N8QKH Arachis hypogaea HOM05D007265 ORTHO05D009118 7.7e-21 103.2 61 85.2
MELO3C022263.2 Cucumis melo HOM05D007265 ORTHO05D009118 7.7e-21 103.2 63 82.5
Migut.N01534 Erythranthe guttata HOM05D007265 ORTHO05D009118 7.7e-21 103.2 66 80.3
Medtr7g117700 Medicago truncatula HOM05D007265 ORTHO05D009118 1.0e-20 102.8 63 81.0
Potri.002G173101 Populus trichocarpa HOM05D007265 ORTHO05D009118 1.0e-20 102.8 68 80.9
THA.LOC104802081 Tarenaya hassleriana HOM05D007265 ORTHO05D009118 1.0e-20 102.8 66 78.8
HPP92_020189 Vanilla planifolia HOM05D004435 ORTHO05D005103 1.0e-20 102.8 64 81.2
Ca_09518_v3 Cicer arietinum L. HOM05D007265 ORTHO05D009118 1.3e-20 102.4 63 79.4
CsaV3_6G008500 Cucumis sativus L. HOM05D007265 ORTHO05D009118 1.3e-20 102.4 63 82.5
HanXRQChr16g0521331 Helianthus annuus HOM05D007265 ORTHO05D009118 1.3e-20 102.4 64 81.2
Aqoxy5G04249 Aquilegia oxysepala HOM05D007265 ORTHO05D009118 1.7e-20 102.1 61 85.2
BcaC02g07039 Brassica carinata HOM05D007265 ORTHO05D009118 1.7e-20 102.1 66 80.3
Lj1g0009143 Lotus japonicus HOM05D007265 ORTHO05D009118 2.3e-20 101.7 63 79.4
THA.LOC104817372 Tarenaya hassleriana HOM05D007265 ORTHO05D009118 3.8e-20 100.9 66 77.3
A04p34450 Brassica napus HOM05D007265 ORTHO05D009118 5.0e-20 100.5 66 78.8
Lsat_1_v5_gn_3_126500 Lactuca sativa HOM05D007265 ORTHO05D009118 6.6e-20 100.1 57 87.7
Os05g0542100 Oryza sativa ssp. japonica HOM05D007265 ORTHO05D009118 6.6e-20 100.1 64 76.6
AT2G46540 Arabidopsis thaliana HOM05D007265 ORTHO05D009118 8.6e-20 99.8 66 78.8
CANSAT56G3703 Cannabis sativa HOM05D007265 ORTHO05D009118 8.6e-20 99.8 63 77.8
Sabra02G0140200 Salix brachista HOM05D007265 ORTHO05D009118 8.6e-20 99.8 68 76.5
Sp4g28590 Schrenkiella parvula HOM05D007265 ORTHO05D009118 8.6e-20 99.8 66 78.8
AL4G45970 Arabidopsis lyrata HOM05D007265 ORTHO05D009118 1.1e-19 99.4 66 77.3
BcaC02g12671 Brassica carinata HOM05D007265 ORTHO05D009118 1.1e-19 99.4 64 79.7
BcaC02g12679 Brassica carinata HOM05D007265 ORTHO05D009118 1.1e-19 99.4 64 79.7
C04p01380 Brassica napus HOM05D007265 ORTHO05D009118 1.1e-19 99.4 64 79.7
BolC4t21791H Brassica oleracea HOM05D007265 ORTHO05D009118 1.1e-19 99.4 64 79.7
BraA05t19124Z Brassica rapa HOM05D007265 ORTHO05D009118 1.1e-19 99.4 64 79.7
Carub.0004s2926 Capsella rubella HOM05D007265 ORTHO05D009118 1.1e-19 99.4 64 79.7
TWI59G0786 Tripterygium wilfordii HOM05D007265 ORTHO05D009118 1.1e-19 99.4 63 81.0
BraA04t18903Z Brassica rapa HOM05D007265 ORTHO05D009118 1.9e-19 98.6 66 77.3
Oeu007878.1 Olea europaea HOM05D007265 ORTHO05D009118 3.3e-19 97.8 55 92.7
Lalb_Chr18g0044541 Lupinus albus HOM05D007265 ORTHO05D009118 4.2e-19 97.4 63 79.4
Manes.01G244801 Manihot esculenta HOM05D007265 ORTHO05D009118 5.5e-19 97.1 63 79.4
CARHR141880 Cardamine hirsuta HOM05D007265 ORTHO05D009118 9.5e-19 96.3 66 77.3
BolC4t28709H Brassica oleracea HOM05D007265 ORTHO05D009118 2.1e-18 95.1 66 74.2
Gorai.008G126400 Gossypium raimondii HOM05D007265 ORTHO05D009118 2.1e-18 95.1 55 87.3
MBI07_g24775_MAGBIO Magnolia biondii HOM05D007265 ORTHO05D009118 2.1e-18 95.1 60 81.7
vmacro13170 Vaccinium macrocarpon HOM05D007265 ORTHO05D009118 2.8e-18 94.7 58 84.5
Lsat_1_v5_gn_4_39661 Lactuca sativa HOM05D007265 ORTHO05D009118 3.6e-18 94.4 58 81.0
Manes.05G021500 Manihot esculenta HOM05D007265 ORTHO05D009118 3.6e-18 94.4 63 77.8
Lalb_Chr15g0076341 Lupinus albus HOM05D007265 ORTHO05D009118 6.1e-18 93.6 63 76.2
Rhsim01G0174400 Rhododendron simsii HOM05D007265 ORTHO05D009118 6.1e-18 93.6 82 65.9
Nn3g18955 Nelumbo nucifera HOM05D007265 ORTHO05D009118 1.0e-17 92.8 64 81.2
COL.COLO4_06226 Corchorus olitorius HOM05D007265 ORTHO05D009118 1.4e-17 92.4 54 90.7
ClCG06G002640 Citrullus lanatus HOM05D007265 ORTHO05D009118 2.3e-17 91.7 56 80.4
Hund16719 Selenicereus undatus HOM05D007265 ORTHO05D009118 2.3e-17 91.7 81 61.7
Psat3g174080 Pisum sativum HOM05D007265 ORTHO05D009118 6.8e-17 90.1 56 80.4
Psat3g001880 Pisum sativum HOM05D007265 ORTHO05D009118 8.9e-17 89.7 52 84.6
Sc01g0002550 Simmondsia chinensis HOM05D007265 ORTHO05D009118 8.9e-17 89.7 57 77.2
MSTRG.17355 Avicennia marina HOM05D007265 ORTHO05D009118 2.0e-16 88.6 55 83.6
Hund27188 Selenicereus undatus HOM05D007265 ORTHO05D009118 2.0e-16 88.6 57 78.9
BcaC02g07016 Brassica carinata HOM05D007265 ORTHO05D009118 2.6e-16 88.2 58 77.6
SalBow5G3999 Salvia bowleyana HOM05D002476 ORTHO05D002652 3.4e-16 87.8 55 83.6
Os01g0705500 Oryza sativa ssp. japonica HOM05D007265 ORTHO05D009118 2.2e-15 85.1 48 87.5
EL10Ac1g00247 Beta vulgaris HOM05D007265 ORTHO05D009118 3.7e-15 84.3 55 74.5
A05p01230 Brassica napus HOM05D007265 ORTHO05D009118 4.9e-15 84.0 55 80.0
Gorai.007G109700 Gossypium raimondii HOM05D007265 ORTHO05D009118 4.1e-14 80.9 48 87.5
Aa31LG1G27910 Aethionema arabicum HOM05D007265 ORTHO05D009118 9.2e-14 79.7 54 74.1
BcaNung06658 Brassica carinata HOM05D007265 ORTHO05D009118 1.2e-13 79.3 49 81.6
Ah.05g179400 Amaranthus hybridus HOM05D007265 ORTHO05D009118 4.5e-13 77.4 57 70.2
AUR62004508 Chenopodium quinoa HOM05D007265 ORTHO05D009118 4.5e-13 77.4 54 70.4
Thhalv10001742m.g Eutrema salsugineum HOM05D007265 ORTHO05D009118 5.9e-13 77.0 114 45.6
Nitab4.5_0010712g0030 Nicotiana tabacum HOM05D007265 ORTHO05D009118 2.3e-12 75.1 37 100.0
SGA_v2.0_scaffold232G43548 Striga asiatica HOM05D007265 ORTHO05D009118 6.6e-12 73.6 39 94.9
RcHm_v2.0_Chr1g0360081 Rosa chinensis HOM05D000497 ORTHO05D013080 1.1e-11 72.8 37 94.6
Potri.014G100250 Populus trichocarpa HOM05D007265 ORTHO05D009118 9.8e-08 59.7 42 71.4
AUR62016412 Chenopodium quinoa HOM05D007265 ORTHO05D009118 1.1e-06 56.2 63 49.2
TAR375G0162 Trochodendron aralioides HOM05D007265 ORTHO05D009118 1.1e-06 56.2 45 75.6
FAN10G0450 Fragaria x ananassa HOM05D007283 ORTHO05D013080 1.4e-06 55.8 28 92.9
Dinv17635 Davidia involucrata HOM05D000187 ORTHO05D000926 3.2e-06 54.7 30 90.0


User provided reference genes

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