Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 0.0e+00 1592.8 827 100.0
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 0.0e+00 1436.8 816 92.3
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 0.0e+00 1146.3 822 76.0
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 0.0e+00 1097.0 823 74.0
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 0.0e+00 1095.5 822 73.4
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 0.0e+00 1085.9 822 72.9
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 5.8e-299 1030.8 920 63.8
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 2.2e-117 427.6 858 38.2
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 5.4e-111 406.4 805 36.3
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 1.0e-106 392.1 891 36.5
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 8.6e-101 372.5 824 34.6
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 1.0e-98 365.5 592 41.2
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 2.2e-96 357.8 861 34.6
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 3.0e-93 347.4 850 34.8
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 6.6e-93 346.3 811 34.0
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 2.5e-92 344.4 829 34.4
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 3.3e-92 344.0 781 34.3
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 4.7e-91 340.1 795 33.0
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 6.8e-90 336.3 840 33.3
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 1.3e-88 332.0 814 32.9
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 3.2e-87 327.4 832 33.7
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 4.1e-87 327.0 557 39.0
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 7.8e-86 322.8 805 33.0
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 2.5e-84 317.8 804 34.2
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 3.3e-84 317.4 740 34.3
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 5.6e-84 316.6 457 43.1
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 1.2e-83 315.5 776 33.1
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 1.6e-83 315.1 643 36.4
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 8.1e-83 312.8 832 33.1
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.1e-82 312.4 824 32.3
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 1.5e-81 308.5 811 32.6
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 2.0e-81 308.1 799 32.4
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 2.0e-81 308.1 790 33.2
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 1.3e-80 305.4 872 32.0
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 6.4e-80 303.1 759 32.9
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 1.1e-79 302.4 802 31.9
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 1.9e-79 301.6 925 30.1
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 9.2e-79 299.3 797 32.2
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 9.2e-79 299.3 797 32.2
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 2.1e-78 298.1 509 39.9
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 6.0e-78 296.6 859 31.1
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 6.0e-78 296.6 903 31.2
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 1.3e-77 295.4 573 37.0
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.1e-76 292.4 807 31.4
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 3.3e-76 290.8 854 31.5
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 7.3e-76 289.7 812 30.4
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 9.5e-76 289.3 774 32.6
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 6.2e-75 286.6 703 33.3
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 1.8e-74 285.0 806 31.3
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 4.0e-74 283.9 529 36.5
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 5.2e-74 283.5 784 31.1
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 1.5e-73 282.0 537 37.2
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 1.1e-71 275.8 804 31.3
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 2.4e-71 274.6 797 30.6
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 4.1e-71 273.9 806 30.6
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 1.2e-70 272.3 827 30.7
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 6.0e-70 270.0 819 29.5
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 1.3e-69 268.9 808 30.4
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 3.3e-68 264.2 796 29.4
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 4.3e-68 263.8 547 35.5
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 9.6e-68 262.7 897 28.9
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 2.1e-67 261.5 471 36.7
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 5.2e-66 256.9 585 36.6
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 9.9e-65 252.7 520 36.5
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 9.9e-65 252.7 810 29.1
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 6.4e-64 250.0 814 30.6
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 1.4e-63 248.8 726 31.1
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 2.4e-63 248.1 817 30.4
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 4.6e-62 243.8 886 30.0
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 6.0e-62 243.4 822 29.9
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 6.6e-61 240.0 860 29.0
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 3.3e-60 237.7 842 30.0
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 1.3e-59 235.7 580 35.2
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 1.6e-59 235.3 551 34.7
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 3.6e-59 234.2 545 34.5
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 6.2e-59 233.4 801 31.1
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 1.2e-57 229.2 805 29.2
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 2.2e-56 224.9 697 32.6
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 1.1e-52 212.6 406 36.5
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 7.4e-52 209.9 249 46.6
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 2.4e-50 204.9 867 28.3
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 3.1e-50 204.5 558 30.3
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 1.5e-49 202.2 833 26.3
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 5.5e-47 193.7 827 27.4
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 1.6e-46 192.2 806 27.3
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 1.0e-45 189.5 827 26.8
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 1.0e-45 189.5 631 30.1
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 8.7e-45 186.4 802 27.1
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 1.6e-43 182.2 773 27.2
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 1.4e-42 179.1 488 31.8
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 6.9e-42 176.8 490 31.8
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 1.2e-41 176.0 479 32.4
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.5e-41 175.6 426 33.8
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 2.6e-41 174.9 809 26.6
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 2.6e-41 174.9 809 26.6
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 6.5e-40 170.2 580 29.3
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 1.1e-39 169.5 799 26.7
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 6.0e-38 163.7 810 26.7
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 2.3e-37 161.8 810 26.0
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 3.0e-37 161.4 550 29.1
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 2.5e-36 158.3 551 29.8
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 3.3e-36 157.9 539 28.9
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 3.3e-36 157.9 469 29.0
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 5.7e-36 157.1 705 26.4
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 1.4e-34 152.5 483 30.6
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 6.9e-34 150.2 502 27.9
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 6.9e-26 123.6 205 40.5
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.7e-19 101.3 94 51.1
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 6.5e-16 90.5 162 36.4
Dinv43435 Davidia involucrata HOM05D001393 ORTHO05D007477 2.6e-12 78.6 259 32.0


User provided reference genes

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