Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001761g0320 Nicotiana tabacum HOM05D000445 ORTHO05D000314 4.3e-40 167.5 85 100.0
Nitab4.5_0007104g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.1e-34 148.7 84 90.5
CAN.G210.9 Capsicum annuum HOM05D000445 ORTHO05D000314 2.3e-33 145.2 107 74.8
Nitab4.5_0005100g0090 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.3e-33 145.2 107 74.8
Peaxi162Scf00147g00312 Petunia axillaris HOM05D000445 ORTHO05D010350 2.3e-33 145.2 107 74.8
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.3e-33 145.2 107 74.8
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.3e-33 145.2 107 74.8
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.3e-33 145.2 107 74.8
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.3e-33 145.2 107 74.8
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.3e-33 145.2 107 74.8
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.3e-33 145.2 107 74.8
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 2.3e-33 145.2 107 74.8
CAN.G1648.15 Capsicum annuum HOM05D000445 ORTHO05D000314 8.7e-33 143.3 107 73.8
Solyc03g078010.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-31 138.7 107 71.0
Nitab4.5_0020349g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.8e-31 138.3 85 85.9
CAN.G1298.13 Capsicum annuum HOM05D000445 ORTHO05D000314 4.8e-31 137.5 107 72.0
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 1.8e-30 135.6 110 68.2
SalBow1G2507 Salvia bowleyana HOM05D000445 ORTHO05D000314 1.8e-30 135.6 107 72.0
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 4.0e-30 134.4 110 67.3
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 4.0e-30 134.4 110 67.3
CAN.G1738.15 Capsicum annuum HOM05D000445 ORTHO05D000314 5.3e-30 134.0 103 71.8
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 5.3e-30 134.0 110 68.2
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 5.3e-30 134.0 110 68.2
ATR0258G003 Amborella trichopoda HOM05D000445 ORTHO05D000314 9.0e-30 133.3 110 67.3
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 4.5e-29 131.0 110 67.3
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 5.8e-29 130.6 110 68.2
Nn3g16153 Nelumbo nucifera HOM05D000445 ORTHO05D000314 5.8e-29 130.6 110 68.2
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 5.8e-29 130.6 110 68.2
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 7.6e-29 130.2 110 67.3
RcHm_v2.0_Chr2g0118451 Rosa chinensis HOM05D000445 ORTHO05D000314 7.6e-29 130.2 110 67.3
Lj2C1238G15 Lonicera japonica HOM05D000445 ORTHO05D000314 1.3e-28 129.4 110 67.3
Lj2C1239G59 Lonicera japonica HOM05D000445 ORTHO05D000314 1.3e-28 129.4 110 67.3
Lju5009C0G1 Lonicera japonica HOM05D000445 ORTHO05D000314 1.3e-28 129.4 110 67.3
Lj4g0020232 Lotus japonicus HOM05D000445 ORTHO05D000314 1.7e-28 129.0 93 74.2
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 2.2e-28 128.6 110 66.4
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 2.2e-28 128.6 110 66.4
BraSC143t45672Z Brassica rapa HOM05D000445 ORTHO05D000314 2.2e-28 128.6 110 66.4
Nitab4.5_0003101g0070 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.2e-28 128.6 68 94.1
arahy.Tifrunner.gnm1.ann1.QI67VD Arachis hypogaea HOM05D000445 ORTHO05D000314 2.9e-28 128.3 110 64.5
arahy.Tifrunner.gnm1.ann1.U896IL Arachis hypogaea HOM05D000445 ORTHO05D000314 2.9e-28 128.3 110 64.5
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 2.9e-28 128.3 110 64.5
LjContig00318g0009654 Lotus japonicus HOM05D000445 ORTHO05D000314 2.9e-28 128.3 110 64.5
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 2.9e-28 128.3 110 64.5
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 2.9e-28 128.3 110 64.5
SabraPtG0004600 Salix brachista HOM05D000445 ORTHO05D000314 2.9e-28 128.3 110 66.4
SabraPtG0006900 Salix brachista HOM05D000445 ORTHO05D000314 2.9e-28 128.3 110 66.4
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 3.8e-28 127.9 110 65.5
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 4.9e-28 127.5 110 66.4
BcaB02g11358 Brassica carinata HOM05D000445 ORTHO05D000314 8.4e-28 126.7 110 65.5
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 8.4e-28 126.7 110 65.5
BolSC29t60535H Brassica oleracea HOM05D000445 ORTHO05D000314 8.4e-28 126.7 110 65.5
BolSC29t60563H Brassica oleracea HOM05D000445 ORTHO05D000314 8.4e-28 126.7 110 65.5
BolSC29t60617H Brassica oleracea HOM05D000445 ORTHO05D000314 8.4e-28 126.7 110 65.5
BolSC47t61073H Brassica oleracea HOM05D000445 ORTHO05D000314 8.4e-28 126.7 110 65.5
VMungo0942G0001 Vigna mungo HOM05D000445 ORTHO05D000314 1.4e-27 125.9 110 63.6
VMungo0976G0001 Vigna mungo HOM05D000445 ORTHO05D000314 1.4e-27 125.9 110 63.6
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 1.9e-27 125.6 110 65.5
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 2.4e-27 125.2 110 66.4
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 2.4e-27 125.2 110 66.4
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 2.4e-27 125.2 110 66.4
arahy.Tifrunner.gnm1.ann1.FTZ997 Arachis hypogaea HOM05D000445 ORTHO05D000314 3.2e-27 124.8 105 65.7
unitig_91.g26489 Utricularia gibba HOM05D000445 ORTHO05D000314 7.1e-27 123.6 109 63.3
unitig_91.g26515 Utricularia gibba HOM05D000445 ORTHO05D000314 7.1e-27 123.6 109 63.3
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 7.1e-27 123.6 109 63.3
Nitab4.5_0000011g0360 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.1e-26 122.1 91 73.6
AL2G20470 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 7.9e-26 120.2 110 64.5
Sed0009579 Sechium edule HOM05D000445 ORTHO05D000314 1.0e-25 119.8 110 63.6
SGA_v2.0_scaffold2596G54158 Striga asiatica HOM05D000445 ORTHO05D000314 1.3e-25 119.4 71 88.7
CAN.G8.28 Capsicum annuum HOM05D000445 ORTHO05D000314 3.0e-25 118.2 94 69.1
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 6.7e-25 117.1 136 55.1
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 2.5e-24 115.2 110 62.7
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 2.5e-24 115.2 110 62.7
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 2.5e-24 115.2 110 62.7
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQChr00c0349g0573981 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQChr05g0152501 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 3.3e-24 114.8 110 62.7
HanXRQChr11g0336111 Helianthus annuus HOM05D000445 ORTHO05D000314 9.6e-24 113.2 110 61.8
HanXRQChr11g0336131 Helianthus annuus HOM05D000445 ORTHO05D000314 9.6e-24 113.2 110 61.8
FvH4_c3g00160 Fragaria vesca HOM05D000445 ORTHO05D000314 8.2e-23 110.2 96 64.6
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 1.8e-22 109.0 113 60.2
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 1.8e-22 109.0 113 60.2
Lsat_1_v5_gn_9_85820 Lactuca sativa HOM05D000445 ORTHO05D000314 1.8e-22 109.0 113 60.2
Aqoxy169s001 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 3.1e-22 108.2 66 83.3
CAN.G1063.2 Capsicum annuum HOM05D000445 ORTHO05D000314 1.2e-21 106.3 86 68.6
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 5.8e-21 104.0 96 60.4
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 5.8e-21 104.0 96 60.4
AL1G45010 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 1.3e-20 102.8 99 62.6
Nitab4.5_0014666g0050 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.5e-19 98.6 87 64.4
Gorai.009G118200 Gossypium raimondii HOM05D000445 ORTHO05D000314 5.5e-19 97.4 92 59.8
Nitab4.5_0002616g0100 Nicotiana tabacum HOM05D000445 ORTHO05D000314 9.3e-19 96.7 59 84.7
Gohir.A03G089101 Gossypium hirsutum HOM05D000445 ORTHO05D000314 6.0e-18 94.0 92 57.6
Migut.D01323 Erythranthe guttata HOM05D000445 ORTHO05D000314 1.0e-17 93.2 107 55.1
Lj2C1238G34 Lonicera japonica HOM05D000445 ORTHO05D000314 1.0e-17 93.2 87 60.9
Nitab4.5_0023562g0010 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.3e-17 92.0 105 56.2
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 9.7e-16 86.7 84 59.5
Gorai.004G232100 Gossypium raimondii HOM05D000445 ORTHO05D000314 2.8e-15 85.1 87 55.2
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 4.8e-15 84.3 84 58.3
Solyc01g017410.3 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.4e-14 82.8 48 81.2
Gorai.005G082000 Gossypium raimondii HOM05D000445 ORTHO05D000314 3.1e-14 81.6 42 90.5
Nitab4.5_0009685g0030 Nicotiana tabacum HOM05D003033 ORTHO05D003475 4.1e-14 81.3 42 90.5
Solyc12g035980.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.2e-12 75.5 41 85.4
Ah.10g027230 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.8e-12 74.7 87 54.0
Ah.10g027290 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.8e-12 74.7 87 54.0
Ah.10g027420 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.8e-12 74.7 87 54.0
Ah.10g027670 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.8e-12 74.7 87 54.0
Ah.10g027730 Amaranthus hybridus HOM05D000445 ORTHO05D000314 3.8e-12 74.7 87 54.0
Nitab4.5_0000496g0040 Nicotiana tabacum HOM05D000580 ORTHO05D001785 3.8e-12 74.7 44 79.5
Nn1g10066 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.2e-11 71.6 43 88.4
Nn1g10127 Nelumbo nucifera HOM05D000445 ORTHO05D000314 3.2e-11 71.6 43 88.4
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 1.6e-10 69.3 76 56.6
Migut.D01405 Erythranthe guttata HOM05D000445 ORTHO05D000314 1.6e-10 69.3 69 59.4
Solyc12g035780.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.7e-10 68.6 41 82.9
SGA_v2.0_scaffold62G21317 Striga asiatica HOM05D000445 ORTHO05D000314 2.3e-09 65.5 42 81.0
Hund01216 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Hund11510 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Hund19325 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Hund26851 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Hund26897 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Hund27472 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Hund29661 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Hund29851 Selenicereus undatus HOM05D000445 ORTHO05D000314 5.1e-09 64.3 110 44.5
Aqoxy3G01862 Aquilegia oxysepala HOM05D000445 ORTHO05D000314 8.8e-09 63.5 78 52.6
HanXRQChr00c0572g0575971 Helianthus annuus HOM05D000445 ORTHO05D000314 8.8e-09 63.5 98 49.0
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.5e-08 62.8 74 52.7
Hund27473 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.5e-08 62.0 73 54.8
CSS0018615 Camellia sinensis var. sinensis HOM05D000445 ORTHO05D000314 5.7e-08 60.8 33 81.8
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 8.2e-07 57.0 70 52.9
Nn020s41481 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.8e-06 55.8 29 93.1
Gorai.002G166000 Gossypium raimondii HOM05D000445 ORTHO05D000314 9.1e-06 53.5 53 54.7


User provided reference genes

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