Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001761g0150 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.5e-42 174.9 79 100.0
CAN.G134.6 Capsicum annuum HOM05D008037 ORTHO05D004271 3.6e-33 144.4 87 79.3
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 8.7e-27 123.2 137 48.9
Sc02g0004570 Simmondsia chinensis HOM05D008037 ORTHO05D004271 6.2e-25 117.1 74 75.7
Solyc11g021160.1 Solanum lycopersicum HOM05D001966 ORTHO05D010055 2.4e-24 115.2 117 53.0
Peaxi162Scf00687g00611 Petunia axillaris HOM05D001966 ORTHO05D010055 8.7e-19 96.7 46 93.5
vmacro22395 Vaccinium macrocarpon HOM05D008016 ORTHO05D004271 8.7e-19 96.7 52 84.6
vmacro22417 Vaccinium macrocarpon HOM05D008354 ORTHO05D010055 8.7e-19 96.7 60 78.3
vmacro22420 Vaccinium macrocarpon HOM05D008016 ORTHO05D010055 8.7e-19 96.7 52 84.6
DCAR_001145 Daucus carota HOM05D001966 ORTHO05D010055 1.9e-18 95.5 48 91.7
Nitab4.5_0006502g0020 Nicotiana tabacum HOM05D001966 ORTHO05D010055 9.6e-18 93.2 52 78.8
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.1e-17 92.0 47 87.2
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 8.1e-17 90.1 60 70.0
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 1.1e-16 89.7 47 87.2
Nitab4.5_0003101g0110 Nicotiana tabacum HOM05D008354 ORTHO05D010055 5.3e-16 87.4 55 74.5
CAN.G1298.21 Capsicum annuum HOM05D000445 ORTHO05D000314 1.2e-15 86.3 48 83.3
Nitab4.5_0008665g0040 Nicotiana tabacum HOM05D001070 ORTHO05D002096 2.0e-15 85.5 56 73.2
EL10As10g23964 Beta vulgaris HOM05D001966 ORTHO05D010055 5.8e-15 84.0 46 87.0
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 2.2e-14 82.0 172 36.0
CAN.G1185.5 Capsicum annuum HOM05D001070 ORTHO05D010055 3.2e-13 78.2 48 77.1
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 1.2e-12 76.3 40 82.5
HPP92_028386 Vanilla planifolia HOM05D009726 ORTHO05D010055 1.2e-12 76.3 52 71.2
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 3.5e-12 74.7 41 82.9
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 3.5e-12 74.7 82 51.2
Lsat_1_v5_gn_4_68181 Lactuca sativa HOM05D008016 ORTHO05D010055 3.9e-11 71.2 40 82.5
Nitab4.5_0012234g0010 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.9e-11 71.2 57 61.4
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 5.1e-11 70.9 37 86.5
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 5.1e-11 70.9 32 90.6
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 5.1e-11 70.9 32 90.6
Solyc00g500344.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 5.1e-11 70.9 32 90.6
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 6.7e-11 70.5 36 86.1
arahy.Tifrunner.gnm1.ann1.7D98FQ Arachis hypogaea HOM05D000963 ORTHO05D004715 6.7e-11 70.5 32 96.9
arahy.Tifrunner.gnm1.ann1.U095GY Arachis hypogaea HOM05D000963 ORTHO05D004715 6.7e-11 70.5 32 96.9
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 6.7e-11 70.5 36 86.1
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 6.7e-11 70.5 32 90.6
Solyc04g082990.3 Solanum lycopersicum HOM05D005978 ORTHO05D004271 8.7e-11 70.1 35 85.7
CDE02G0533 Ceratophyllum demersum HOM05D008037 ORTHO05D004271 1.1e-10 69.7 31 93.5
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 1.1e-10 69.7 31 93.5
Nitab4.5_0000066g0170 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.1e-10 69.7 31 93.5
Solyc09g011150.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 1.1e-10 69.7 31 93.5
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 1.5e-10 69.3 32 90.6
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 1.9e-10 68.9 58 58.6
arahy.Tifrunner.gnm1.ann1.KJ09M7 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.9e-10 68.9 58 58.6
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 1.9e-10 68.9 83 49.4
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 3.3e-10 68.2 30 96.7
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 3.3e-10 68.2 31 90.3
Peaxi162Scf00080g00519 Petunia axillaris HOM05D001966 ORTHO05D010055 3.3e-10 68.2 43 72.1
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 4.3e-10 67.8 32 87.5
arahy.Tifrunner.gnm1.ann1.LBLK2X Arachis hypogaea HOM05D008037 ORTHO05D004271 4.3e-10 67.8 32 87.5
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 4.3e-10 67.8 32 87.5
arahy.Tifrunner.gnm1.ann1.WFJR7S Arachis hypogaea HOM05D008037 ORTHO05D004271 5.6e-10 67.4 32 87.5
Potri.008G221801 Populus trichocarpa HOM05D008037 ORTHO05D004271 7.4e-10 67.0 31 93.5
FAN22G1916 Fragaria x ananassa HOM05D008037 ORTHO05D004271 9.6e-10 66.6 31 90.3
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 9.6e-10 66.6 31 90.3
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 9.6e-10 66.6 31 90.3
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 9.6e-10 66.6 31 90.3
EL10Ac6g14593 Beta vulgaris HOM05D001966 ORTHO05D010055 1.6e-09 65.9 29 96.6
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 1.6e-09 65.9 31 90.3
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.1e-09 65.5 30 90.0
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 2.8e-09 65.1 31 87.1
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 3.7e-09 64.7 31 87.1
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 4.8e-09 64.3 34 79.4
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 6.2e-09 63.9 31 90.3
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund28446 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund28585 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund28944 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund28949 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund28959 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29107 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29184 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29242 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29271 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29275 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29279 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29283 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29451 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29497 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29785 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund29912 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund30004 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund30064 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund30203 Selenicereus undatus HOM05D008259 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 8.1e-09 63.5 32 81.2
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.4e-08 62.8 31 87.1
Peaxi162Scf00210g00153 Petunia axillaris HOM05D008037 ORTHO05D004271 1.4e-08 62.8 31 83.9
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 3.1e-08 61.6 30 86.7
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 4.0e-08 61.2 31 83.9
Psat5g119000 Pisum sativum HOM05D009726 ORTHO05D010588 4.0e-08 61.2 38 71.1
arahy.Tifrunner.gnm1.ann1.JWI1UU Arachis hypogaea HOM05D009726 ORTHO05D010588 5.3e-08 60.8 65 46.2
FAN26G0971 Fragaria x ananassa HOM05D008037 ORTHO05D004271 6.9e-08 60.5 31 83.9
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 6.9e-08 60.5 31 83.9
arahy.Tifrunner.gnm1.ann1.61DFKT Arachis hypogaea HOM05D008037 ORTHO05D004271 1.2e-07 59.7 27 88.9
CAN.G82.6 Capsicum annuum HOM05D000011 ORTHO05D000018 1.5e-07 59.3 30 86.7
EL10Ac5g11360 Beta vulgaris HOM05D008037 ORTHO05D004271 2.0e-07 58.9 30 80.0
COL.COLO4_33462 Corchorus olitorius HOM05D008016 ORTHO05D004271 2.6e-07 58.5 31 83.9
arahy.Tifrunner.gnm1.ann1.CK4XFX Arachis hypogaea HOM05D009726 ORTHO05D010055 3.4e-07 58.2 32 84.4
arahy.Tifrunner.gnm1.ann1.PRQI1Y Arachis hypogaea HOM05D008016 ORTHO05D010588 3.4e-07 58.2 32 84.4
arahy.Tifrunner.gnm1.ann1.9FU6Q4 Arachis hypogaea HOM05D009726 ORTHO05D010588 4.5e-07 57.8 36 72.2
arahy.Tifrunner.gnm1.ann1.V4KXIX Arachis hypogaea HOM05D009726 ORTHO05D010588 9.9e-07 56.6 32 81.2
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 9.9e-07 56.6 34 73.5
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.3e-06 56.2 31 77.4
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 1.7e-06 55.8 30 76.7
Nitab4.5_0005831g0030 Nicotiana tabacum HOM05D001090 ORTHO05D006167 2.2e-06 55.5 43 62.8
Nitab4.5_0006502g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.2e-06 55.5 30 80.0
Solyc05g047670.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.2e-06 55.5 68 45.6
arahy.Tifrunner.gnm1.ann1.M1FG7L Arachis hypogaea HOM05D008354 ORTHO05D010055 2.9e-06 55.1 29 82.8
Nitab4.5_0008665g0060 Nicotiana tabacum HOM05D008037 ORTHO05D004271 3.8e-06 54.7 27 81.5
Nitab4.5_0012234g0020 Nicotiana tabacum HOM05D008016 ORTHO05D010055 6.4e-06 53.9 42 61.9
arahy.Tifrunner.gnm1.ann1.R58SNE Arachis hypogaea HOM05D008016 ORTHO05D010055 8.4e-06 53.5 52 53.8
arahy.Tifrunner.gnm1.ann1.WK7HZX Arachis hypogaea HOM05D009726 ORTHO05D010588 8.4e-06 53.5 36 69.4


User provided reference genes

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