Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001755g0100 Nicotiana tabacum HOM05D008072 ORTHO05D010204 1.3e-48 196.1 101 100.0
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 6.5e-27 124.0 84 76.2
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 2.5e-26 122.1 85 75.3
Sopen03g039710 Solanum pennellii HOM05D008072 ORTHO05D010204 5.1e-24 114.4 84 72.6
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 2.0e-23 112.5 84 72.6
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 2.7e-17 92.0 82 54.9
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 2.0e-15 85.9 72 59.7
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 3.3e-15 85.1 55 74.5
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 9.7e-15 83.6 73 58.9
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 4.8e-14 81.3 67 56.7
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 1.4e-13 79.7 81 48.1
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 1.8e-13 79.3 88 53.4
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 1.8e-13 79.3 85 54.1
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 1.2e-12 76.6 86 54.7
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 1.2e-12 76.6 80 47.5
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 1.6e-12 76.3 77 50.6
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 2.6e-12 75.5 55 63.6
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 7.7e-12 73.9 62 59.7
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 1.0e-11 73.6 84 46.4
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 2.9e-11 72.0 78 44.9
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 3.8e-11 71.6 67 56.7
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 8.5e-11 70.5 55 60.0
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 8.5e-11 70.5 82 45.1
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 8.5e-11 70.5 80 45.0
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 1.1e-10 70.1 66 54.5
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 1.1e-10 70.1 74 52.7
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 1.9e-10 69.3 72 55.6
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 2.5e-10 68.9 94 44.7
Lsat_1_v5_gn_4_99940 Lactuca sativa HOM05D008072 ORTHO05D010204 2.5e-10 68.9 66 53.0
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 2.5e-10 68.9 74 48.6
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 4.2e-10 68.2 44 70.5
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 7.2e-10 67.4 50 66.0
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 9.4e-10 67.0 94 43.6
HanXRQChr16g0501221 Helianthus annuus HOM05D008072 ORTHO05D010204 9.4e-10 67.0 67 49.3
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 9.4e-10 67.0 63 52.4
Oeu063939.2 Olea europaea HOM05D000181 ORTHO05D008575 1.2e-09 66.6 62 56.5
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 1.6e-09 66.2 50 66.0
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.6e-09 66.2 50 66.0
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.6e-09 66.2 50 66.0
Gohir.A02G118500 Gossypium hirsutum HOM05D008072 ORTHO05D010204 2.1e-09 65.9 94 43.6
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 6.1e-09 64.3 85 47.1
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 8.0e-09 63.9 63 57.1
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 1.0e-08 63.5 50 62.0
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.8e-08 62.8 72 51.4
MELO3C024449.2 Cucumis melo HOM05D008072 ORTHO05D010204 3.0e-08 62.0 43 65.1
CsaV3_7G035400 Cucumis sativus L. HOM05D008072 ORTHO05D010204 6.7e-08 60.8 43 62.8
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 1.5e-07 59.7 43 62.8
Nn8g39117 Nelumbo nucifera HOM05D008072 ORTHO05D010204 2.0e-07 59.3 74 40.5
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 3.3e-07 58.5 46 63.0
Sed0011388 Sechium edule HOM05D008072 ORTHO05D010204 3.3e-07 58.5 70 45.7
MD09G1205700 Malus domestica HOM05D008072 ORTHO05D010204 4.4e-07 58.2 61 47.5
EL10Ac9g22100 Beta vulgaris HOM05D008072 ORTHO05D010204 7.5e-07 57.4 78 43.6
SGA_v2.0_scaffold4G02017 Striga asiatica HOM05D008072 ORTHO05D010204 7.5e-07 57.4 46 58.7
MBI01_g42894_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 9.7e-07 57.0 70 50.0
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 1.3e-06 56.6 45 57.8
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 1.3e-06 56.6 74 47.3
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 1.7e-06 56.2 74 45.9
Medtr8g013930 Medicago truncatula HOM05D008072 ORTHO05D010204 2.2e-06 55.8 80 45.0
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 2.8e-06 55.5 82 41.5
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 3.7e-06 55.1 74 47.3
CiPaw.02G146800 Carya illinoinensis HOM05D008072 ORTHO05D010204 4.8e-06 54.7 43 65.1


User provided reference genes

Program Settings