Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001747g0060 Nicotiana tabacum HOM05D008440 ORTHO05D001422 5.5e-74 280.8 134 100.0
Nitab4.5_0000032g0170 Nicotiana tabacum HOM05D008440 ORTHO05D001422 5.4e-37 157.9 141 61.0
Nitab4.5_0000708g0040 Nicotiana tabacum HOM05D008440 ORTHO05D006375 6.4e-22 107.8 72 70.8
Nitab4.5_0001850g0050 Nicotiana tabacum HOM05D008440 ORTHO05D006375 8.3e-22 107.5 73 71.2
Nitab4.5_0002507g0040 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.1e-20 102.8 72 69.4
Nitab4.5_0007241g0020 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.3e-19 99.4 186 37.1
Nitab4.5_0006940g0020 Nicotiana tabacum HOM05D000413 ORTHO05D000292 8.6e-19 97.4 72 68.1
Nitab4.5_0000708g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 4.3e-18 95.1 73 63.0
Nitab4.5_0003691g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 4.7e-17 91.7 63 69.8
Nitab4.5_0001544g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 2.2e-14 82.8 210 31.9
Nitab4.5_0001201g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 3.7e-14 82.0 61 67.2
Nitab4.5_0004906g0060 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.7e-14 82.0 60 68.3
Nitab4.5_0005614g0050 Nicotiana tabacum HOM05D008440 ORTHO05D001422 6.4e-14 81.3 115 39.1
Nitab4.5_0000359g0150 Nicotiana tabacum HOM05D008440 ORTHO05D001422 8.4e-14 80.9 130 36.2
Nitab4.5_0000053g0240 Nicotiana tabacum HOM05D002047 ORTHO05D001422 4.1e-13 78.6 60 63.3
Nitab4.5_0000858g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 2.7e-12 75.9 77 48.1
Nitab4.5_0000637g0010 Nicotiana tabacum HOM05D008440 ORTHO05D000292 1.1e-10 70.5 77 46.8
Nitab4.5_0000318g0210 Nicotiana tabacum HOM05D004926 ORTHO05D001422 7.3e-10 67.8 59 49.2
Nitab4.5_0000118g0050 Nicotiana tabacum HOM05D008695 ORTHO05D001422 2.8e-09 65.9 60 60.0
Nitab4.5_0000116g0480 Nicotiana tabacum HOM05D004926 ORTHO05D001422 3.6e-09 65.5 55 50.9
Nitab4.5_0003684g0010 Nicotiana tabacum HOM05D008440 ORTHO05D000292 4.7e-09 65.1 75 44.0
Nitab4.5_0024891g0010 Nicotiana tabacum HOM05D008440 ORTHO05D006375 4.7e-09 65.1 72 48.6
Nitab4.5_0000035g0160 Nicotiana tabacum HOM05D004926 ORTHO05D006375 6.2e-09 64.7 57 49.1
Nitab4.5_0001955g0140 Nicotiana tabacum HOM05D008440 ORTHO05D006375 1.4e-08 63.5 72 47.2
Nitab4.5_0003273g0050 Nicotiana tabacum HOM05D004926 ORTHO05D001422 1.4e-08 63.5 57 47.4
Nitab4.5_0005061g0030 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.4e-08 63.5 72 47.2
Nitab4.5_0026237g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 1.4e-08 63.5 72 47.2
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 2.4e-08 62.8 57 52.6
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 3.1e-08 62.4 66 43.9
Nitab4.5_0000652g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 5.2e-08 61.6 72 47.2
Nitab4.5_0026367g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 5.2e-08 61.6 72 45.8
Sopen05g025520 Solanum pennellii HOM05D000047 ORTHO05D000044 5.2e-08 61.6 95 37.9
Nitab4.5_0000157g0030 Nicotiana tabacum HOM05D008440 ORTHO05D011334 6.8e-08 61.2 72 45.8
Nitab4.5_0000235g0100 Nicotiana tabacum HOM05D008440 ORTHO05D006375 8.9e-08 60.8 72 45.8
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.5e-07 60.1 57 50.9
Sopen04g017310 Solanum pennellii HOM05D008695 ORTHO05D001422 1.5e-07 60.1 57 50.9
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 1.5e-07 60.1 57 50.9
Nitab4.5_0000017g0210 Nicotiana tabacum HOM05D004926 ORTHO05D001422 2.0e-07 59.7 53 50.9
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 2.0e-07 59.7 66 45.5
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 2.6e-07 59.3 55 52.7
Sopen03g011910 Solanum pennellii HOM05D008695 ORTHO05D001422 3.4e-07 58.9 56 50.0
Sopen12g015700 Solanum pennellii HOM05D008695 ORTHO05D001422 4.4e-07 58.5 57 50.9
Sopen02g006620 Solanum pennellii HOM05D000047 ORTHO05D000589 9.9e-07 57.4 62 46.8
Sopen07g015290 Solanum pennellii HOM05D008695 ORTHO05D001422 9.9e-07 57.4 57 49.1
Nitab4.5_0000915g0050 Nicotiana tabacum HOM05D004926 ORTHO05D001422 1.7e-06 56.6 57 42.1
Sopen06g005040 Solanum pennellii HOM05D008695 ORTHO05D001422 1.7e-06 56.6 85 40.0
Sopen07g017450 Solanum pennellii HOM05D008695 ORTHO05D001422 1.7e-06 56.6 57 47.4
Nitab4.5_0000006g0700 Nicotiana tabacum HOM05D031049 ORTHO05D001422 2.2e-06 56.2 56 50.0
PGSC0003DMG400022101 Solanum tuberosum HOM05D008695 ORTHO05D001422 2.2e-06 56.2 66 43.9
Sopen05g010350 Solanum pennellii HOM05D000047 ORTHO05D000044 2.9e-06 55.8 45 53.3
Sopen07g013820 Solanum pennellii HOM05D000047 ORTHO05D001422 3.8e-06 55.5 51 54.9
Sopen05g019090 Solanum pennellii HOM05D008695 ORTHO05D001422 4.9e-06 55.1 59 49.2
Nitab4.5_0004952g0010 Nicotiana tabacum HOM05D008440 ORTHO05D001422 8.4e-06 54.3 71 42.3
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 8.4e-06 54.3 62 43.5


User provided reference genes

Program Settings