Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001747g0050 Nicotiana tabacum HOM05D007524 ORTHO05D009475 1.4e-176 622.9 312 100.0
Nitab4.5_0000825g0060 Nicotiana tabacum HOM05D007524 ORTHO05D009475 6.0e-156 554.3 318 89.6
Peaxi162Scf00032g00619 Petunia axillaris HOM05D007524 ORTHO05D009475 5.8e-143 511.1 336 78.6
Sopen01g004060 Solanum pennellii HOM05D007524 ORTHO05D009475 1.5e-138 496.5 330 77.6
Solyc01g008520.3 Solanum lycopersicum HOM05D007524 ORTHO05D009475 3.3e-138 495.4 330 77.6
Hma1.2p1_0057F.1_g032020 Hydrangea macrophylla HOM05D007524 ORTHO05D009475 1.7e-105 386.7 323 62.5
Dinv25593 Davidia involucrata HOM05D007524 ORTHO05D009475 1.5e-101 373.6 320 61.6
Actinidia07457 Actinidia chinensis HOM05D007524 ORTHO05D009475 4.0e-99 365.5 328 57.9
Migut.C01263 Erythranthe guttata HOM05D007524 ORTHO05D009475 4.5e-95 352.1 327 56.0
TAR628G0034 Trochodendron aralioides HOM05D007524 ORTHO05D009475 4.2e-93 345.5 333 57.1
Cc00_g05860 Coffea canephora HOM05D007524 ORTHO05D009475 9.4e-93 344.4 325 54.2
Gohir.A13G091600 Gossypium hirsutum HOM05D007524 ORTHO05D009475 7.0e-88 328.2 330 54.5
Gorai.013G099200 Gossypium raimondii HOM05D007524 ORTHO05D009475 2.7e-87 326.2 330 54.5
GSVIVG01022414001 Vitis vinifera HOM05D007524 ORTHO05D009475 2.7e-87 326.2 318 56.6
Thecc.02G312000 Theobroma cacao HOM05D007524 ORTHO05D009475 1.3e-86 323.9 330 53.3
Duzib248G0930 Durio zibethinus HOM05D007524 ORTHO05D009475 1.5e-85 320.5 330 52.1
MD16G1006200 Malus domestica HOM05D007524 ORTHO05D009475 1.5e-85 320.5 325 52.9
RcHm_v2.0_Chr4g0446351 Rosa chinensis HOM05D007524 ORTHO05D009475 1.5e-85 320.5 330 53.3
PGR119G1695 Punica granatum HOM05D007524 ORTHO05D009475 4.2e-85 318.9 325 51.4
Prupe.1G344400 Prunus persica HOM05D007524 ORTHO05D009475 9.5e-85 317.8 315 55.6
PSO017G6978 Papaver somniferum HOM05D007524 ORTHO05D009475 8.0e-84 314.7 335 52.8
SGA_v2.0_scaffold118G32494 Striga asiatica HOM05D007524 ORTHO05D009475 1.0e-83 314.3 352 49.4
Rhsim08G0000700 Rhododendron simsii HOM05D007524 ORTHO05D009475 1.4e-83 313.9 311 54.7
Atru.chr11.1209 Acer truncatum HOM05D007524 ORTHO05D009475 3.0e-83 312.8 361 49.6
Aqoxy5G02489 Aquilegia oxysepala HOM05D007524 ORTHO05D009475 3.4e-82 309.3 329 50.5
FAN07G0447 Fragaria x ananassa HOM05D007524 ORTHO05D009475 1.7e-81 307.0 329 51.7
Haze_11736 Corylus avellana HOM05D007524 ORTHO05D009475 4.9e-81 305.4 374 45.7
FvH4_4g36590 Fragaria vesca HOM05D007524 ORTHO05D009475 5.4e-80 302.0 331 50.5
FAN17G0147 Fragaria x ananassa HOM05D007524 ORTHO05D009475 1.3e-78 297.4 328 51.2
Gohir.D13G086900 Gossypium hirsutum HOM05D007524 ORTHO05D009475 2.9e-78 296.2 301 54.2
Oeu032986.1 Olea europaea HOM05D007524 ORTHO05D009475 8.6e-78 294.7 284 59.2
AUR62039047 Chenopodium quinoa HOM05D007524 ORTHO05D009475 1.9e-77 293.5 328 51.8
Sc06g0003090 Simmondsia chinensis HOM05D007524 ORTHO05D009475 4.3e-77 292.4 334 49.4
Sed0011089 Sechium edule HOM05D007524 ORTHO05D009475 5.6e-77 292.0 325 49.2
Medtr4g074200 Medicago truncatula HOM05D007524 ORTHO05D009475 2.8e-76 289.7 328 49.1
Eucgr.J00844 Eucalyptus grandis HOM05D007524 ORTHO05D009475 1.0e-75 287.7 325 49.2
TPR.G21554 Trifolium pratense HOM05D007524 ORTHO05D009475 3.0e-75 286.2 327 48.9
A09p08680 Brassica napus HOM05D007524 ORTHO05D009475 4.0e-75 285.8 332 48.8
ECA247G1633 Erigeron canadensis HOM05D007524 ORTHO05D009475 5.2e-75 285.4 326 47.2
BcaC04g23318 Brassica carinata HOM05D007524 ORTHO05D009475 1.5e-74 283.9 329 48.6
C09p09780 Brassica napus HOM05D007524 ORTHO05D009475 1.5e-74 283.9 329 48.6
FAN12G0445 Fragaria x ananassa HOM05D007524 ORTHO05D009475 7.5e-74 281.6 291 52.2
Lj3g0014826 Lotus japonicus HOM05D007524 ORTHO05D009475 7.5e-74 281.6 327 47.7
Manes.03G082500 Manihot esculenta HOM05D007524 ORTHO05D009475 7.5e-74 281.6 327 48.6
MELO3C020032.2 Cucumis melo HOM05D007524 ORTHO05D009475 9.8e-74 281.2 321 49.2
Glyma.11G104200 Glycine max HOM05D007524 ORTHO05D009475 1.7e-73 280.4 324 48.1
BraA09t36516Z Brassica rapa HOM05D007524 ORTHO05D009475 2.2e-73 280.0 336 48.2
AT5G64520 Arabidopsis thaliana HOM05D007524 ORTHO05D009475 4.9e-73 278.9 341 47.5
Lsat_1_v5_gn_1_28521 Lactuca sativa HOM05D007524 ORTHO05D009475 4.9e-73 278.9 323 46.4
Carub.0008s2532 Capsella rubella HOM05D007524 ORTHO05D009475 6.4e-73 278.5 337 47.5
CsaV3_5G013190 Cucumis sativus L. HOM05D007524 ORTHO05D009475 6.4e-73 278.5 328 48.2
THA.LOC104818453 Tarenaya hassleriana HOM05D007524 ORTHO05D009475 6.4e-73 278.5 336 49.1
BolC9t53889H Brassica oleracea HOM05D007524 ORTHO05D009475 8.3e-73 278.1 333 48.0
Thhalv10005594m.g Eutrema salsugineum HOM05D007524 ORTHO05D009475 8.3e-73 278.1 324 49.1
BcaB04g19971 Brassica carinata HOM05D007524 ORTHO05D009475 3.2e-72 276.2 334 47.0
Glyma.12G029200 Glycine max HOM05D007524 ORTHO05D009475 3.2e-72 276.2 329 47.7
PSO063G3654 Papaver somniferum HOM05D007524 ORTHO05D009475 3.2e-72 276.2 290 54.5
Sp2g27600 Schrenkiella parvula HOM05D007524 ORTHO05D009475 2.0e-71 273.5 335 47.2
VMungo1127G1744 Vigna mungo HOM05D007524 ORTHO05D009475 2.7e-71 273.1 324 46.9
AL8G41910 Arabidopsis lyrata HOM05D007524 ORTHO05D009475 4.6e-71 272.3 341 47.2
Aa31LG1G17400 Aethionema arabicum HOM05D007524 ORTHO05D009475 5.9e-71 271.9 329 44.7
CARHR278490 Cardamine hirsuta HOM05D007524 ORTHO05D009475 1.1e-69 267.7 338 45.0
arahy.Tifrunner.gnm1.ann1.NAL0L4 Arachis hypogaea HOM05D007524 ORTHO05D009475 1.2e-68 264.2 323 45.5
arahy.Tifrunner.gnm1.ann1.SSM27G Arachis hypogaea HOM05D007524 ORTHO05D009475 2.1e-68 263.5 323 45.5
Psat7g173160 Pisum sativum HOM05D007524 ORTHO05D009475 2.1e-68 263.5 292 49.7
ATR0584G209 Amborella trichopoda HOM05D007524 ORTHO05D009475 6.2e-68 261.9 283 52.7
Lalb_Chr19g0139281 Lupinus albus HOM05D007524 ORTHO05D009475 7.5e-66 255.0 325 47.1
CANSAT11G0990 Cannabis sativa HOM05D007524 ORTHO05D009475 9.8e-66 254.6 260 53.5
vmacro18683 Vaccinium macrocarpon HOM05D007524 ORTHO05D009475 2.9e-65 253.1 256 54.3
unitig_46.g18111 Utricularia gibba HOM05D007524 ORTHO05D009475 6.4e-65 251.9 328 44.2
HanXRQChr04g0100921 Helianthus annuus HOM05D007524 ORTHO05D009475 3.5e-63 246.1 325 44.3
EL10Ac4g08947 Beta vulgaris HOM05D007524 ORTHO05D009475 3.0e-62 243.0 399 39.8
Hund06881 Selenicereus undatus HOM05D007524 ORTHO05D009475 4.3e-61 239.2 327 43.4
DCAR_013072 Daucus carota HOM05D007524 ORTHO05D009475 1.4e-59 234.2 328 42.4
Zm00001eb146450 Zea mays HOM05D007524 ORTHO05D009475 2.0e-58 230.3 328 42.4
CiPaw.06G059700 Carya illinoinensis HOM05D007524 ORTHO05D009475 2.1e-55 220.3 219 54.8
Phvul.011G032400 Phaseolus vulgaris HOM05D007524 ORTHO05D009475 5.6e-53 212.2 249 47.4
Ca_03043_v3 Cicer arietinum L. HOM05D007524 ORTHO05D009475 4.0e-51 206.1 220 50.0
AUR62004790 Chenopodium quinoa HOM05D007524 ORTHO05D009475 8.4e-49 198.4 330 40.0
Nn5g27870 Nelumbo nucifera HOM05D007524 ORTHO05D009475 1.1e-48 198.0 191 55.5
Mapoly0070s0006 Marchantia polymorpha HOM05D007524 ORTHO05D009475 1.6e-44 184.1 332 34.0
PGSC0003DMG401031484 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.1e-40 171.4 113 75.2
AagrBONN_evm.TU.Sc2ySwM_368.2219 Anthoceros agrestis HOM05D007524 ORTHO05D009475 2.1e-39 167.2 339 34.5
PGSC0003DMG400019097 Solanum tuberosum HOM05D007524 ORTHO05D009475 3.5e-39 166.4 110 74.5
SMO367G0885 Selaginella moellendorffii HOM05D007524 ORTHO05D009475 3.9e-38 162.9 302 34.4
CAN.G821.7 Capsicum annuum HOM05D007524 ORTHO05D009475 4.3e-37 159.5 116 69.0
PGSC0003DMG400010497 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.2e-34 151.4 152 54.6
Pp3c1_6220 Physcomitrium patens HOM05D007524 ORTHO05D009475 3.2e-32 143.3 313 32.6
Nn5g27871 Nelumbo nucifera HOM05D007524 ORTHO05D009475 2.1e-28 130.6 124 54.8
PGSC0003DMG401010496 Solanum tuberosum HOM05D007524 ORTHO05D009475 7.6e-26 122.1 82 73.2
COL.COLO4_27673 Corchorus olitorius HOM05D007524 ORTHO05D009475 2.4e-24 117.1 108 52.8
ClCG11G001140 Citrullus lanatus HOM05D007524 ORTHO05D009475 1.6e-23 114.4 104 55.8
Cpa.g.sc63.24 Carica papaya HOM05D007524 ORTHO05D009475 1.9e-21 107.5 99 55.6
CBR_g6685 Chara braunii HOM05D007524 ORTHO05D009475 1.5e-10 71.2 160 31.9
PRCOL_00006630 Prasinoderma coloniale HOM05D007524 ORTHO05D009475 5.9e-10 69.3 206 25.7
MCO09G042 Micromonas commoda HOM05D007524 ORTHO05D009475 1.6e-07 61.2 376 21.3
Ah.06g191680 Amaranthus hybridus HOM05D007524 ORTHO05D009475 1.0e-06 58.5 43 69.8
ClCG11G001150 Citrullus lanatus HOM05D007524 ORTHO05D009475 8.7e-06 55.5 96 39.6


User provided reference genes

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