Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001740g0030 Nicotiana tabacum HOM05D007485 ORTHO05D009437 1.7e-97 359.4 189 100.0
CAN.G322.118 Capsicum annuum HOM05D007485 ORTHO05D009437 2.4e-59 232.6 189 72.0
Solyc06g007990.4 Solanum lycopersicum HOM05D007485 ORTHO05D009437 3.6e-55 218.8 189 70.4
Sopen06g002830 Solanum pennellii HOM05D007485 ORTHO05D009437 3.6e-55 218.8 189 71.4
Peaxi162Scf00499g00019 Petunia axillaris HOM05D007485 ORTHO05D009437 4.9e-52 208.4 189 68.3
CSS0034782 Camellia sinensis var. sinensis HOM05D007485 ORTHO05D009437 5.2e-46 188.3 189 58.7
MSTRG.18375 Avicennia marina HOM05D007485 ORTHO05D009437 1.2e-45 187.2 180 57.2
PGSC0003DMG400014703 Solanum tuberosum HOM05D007485 ORTHO05D009437 4.4e-45 185.3 121 83.5
Haze_24766 Corylus avellana HOM05D007485 ORTHO05D009437 7.6e-45 184.5 191 58.1
Prupe.8G207500 Prunus persica HOM05D007485 ORTHO05D009437 2.2e-44 183.0 193 54.9
MD10G1169600 Malus domestica HOM05D007485 ORTHO05D009437 2.9e-44 182.6 193 53.9
MD05G1180900 Malus domestica HOM05D007485 ORTHO05D009437 3.8e-44 182.2 193 53.9
Cfa002536 Carpinus fangiana HOM05D001836 ORTHO05D001519 9.2e-43 177.6 191 55.5
Migut.D00513 Erythranthe guttata HOM05D007485 ORTHO05D009437 9.2e-43 177.6 173 59.0
TWI59G0176 Tripterygium wilfordii HOM05D007485 ORTHO05D009437 1.3e-41 173.7 189 55.6
RcHm_v2.0_Chr6g0285341 Rosa chinensis HOM05D007485 ORTHO05D009437 5.1e-41 171.8 194 55.7
SalBow6G3754 Salvia bowleyana HOM05D007485 ORTHO05D009437 8.7e-41 171.0 191 54.5
Cc01_g17350 Coffea canephora HOM05D007485 ORTHO05D009437 1.1e-40 170.6 191 55.5
Actinidia37576 Actinidia chinensis HOM05D007485 ORTHO05D009437 1.5e-40 170.2 187 59.4
Thecc.01G230100 Theobroma cacao HOM05D007485 ORTHO05D009437 2.5e-40 169.5 189 54.0
Rhsim13G0042600 Rhododendron simsii HOM05D007485 ORTHO05D009437 2.1e-39 166.4 190 53.7
FAN24G1628 Fragaria x ananassa HOM05D007485 ORTHO05D009437 2.8e-39 166.0 193 54.9
Atru.chr5.1880 Acer truncatum HOM05D007485 ORTHO05D009437 3.6e-39 165.6 198 52.0
Nitab4.5_0003180g0040 Nicotiana tabacum HOM05D007485 ORTHO05D009437 4.7e-39 165.2 136 68.4
FvH4_2g19580 Fragaria vesca HOM05D007485 ORTHO05D009437 6.2e-39 164.9 193 54.9
PGR083G2217 Punica granatum HOM05D007485 ORTHO05D009437 6.2e-39 164.9 195 52.3
Gohir.A07G201700 Gossypium hirsutum HOM05D007485 ORTHO05D009437 1.1e-38 164.1 189 51.9
Gohir.D07G208000 Gossypium hirsutum HOM05D007485 ORTHO05D009437 3.1e-38 162.5 189 51.3
SGA_v2.0_scaffold1G00709 Striga asiatica HOM05D007485 ORTHO05D009437 6.9e-38 161.4 189 52.4
CiPaw.03G152400 Carya illinoinensis HOM05D007485 ORTHO05D009437 9.0e-38 161.0 189 52.4
Duzib133G1001 Durio zibethinus HOM05D007485 ORTHO05D009437 1.5e-37 160.2 189 49.7
Gorai.001G234600 Gossypium raimondii HOM05D007485 ORTHO05D009437 2.0e-37 159.8 193 51.3
Manes.12G043200 Manihot esculenta HOM05D007485 ORTHO05D009437 2.6e-37 159.5 190 54.7
FAN27G2610 Fragaria x ananassa HOM05D007485 ORTHO05D009437 3.4e-37 159.1 193 52.8
GSVIVG01028546001 Vitis vinifera HOM05D007485 ORTHO05D009437 9.9e-37 157.5 194 51.0
Potri.002G251800 Populus trichocarpa HOM05D007485 ORTHO05D009437 2.9e-36 156.0 149 59.1
FAN15G2643 Fragaria x ananassa HOM05D007485 ORTHO05D009437 4.9e-36 155.2 193 52.8
vmacro02738 Vaccinium macrocarpon HOM05D007485 ORTHO05D009437 6.4e-36 154.8 212 50.0
Lalb_Chr19g0125461 Lupinus albus HOM05D007485 ORTHO05D009437 8.4e-36 154.5 189 50.8
Glyma.08G357300 Glycine max HOM05D007485 ORTHO05D009437 1.4e-35 153.7 189 47.1
Glyma.18G175800 Glycine max HOM05D007485 ORTHO05D009437 5.4e-35 151.8 153 54.2
Nn1g03123 Nelumbo nucifera HOM05D007485 ORTHO05D009437 5.4e-35 151.8 188 50.0
Phvul.008G122300 Phaseolus vulgaris HOM05D007485 ORTHO05D009437 2.7e-34 149.4 189 47.6
arahy.Tifrunner.gnm1.ann1.9XF3L6 Arachis hypogaea HOM05D007485 ORTHO05D009437 3.5e-34 149.1 192 49.0
Ciclev10022604m.g Citrus clementina HOM05D007485 ORTHO05D009437 6.0e-34 148.3 155 55.5
VMungo1383G3371 Vigna mungo HOM05D007485 ORTHO05D009437 1.0e-33 147.5 172 51.7
CsaV3_3G028690 Cucumis sativus L. HOM05D007485 ORTHO05D009437 1.7e-33 146.7 191 50.8
CANSAT01G1289 Cannabis sativa HOM05D007485 ORTHO05D009437 2.3e-33 146.4 192 45.8
Lj1g0002217 Lotus japonicus HOM05D007485 ORTHO05D009437 3.0e-33 146.0 190 47.9
Medtr7g059255 Medicago truncatula HOM05D007485 ORTHO05D009437 3.0e-33 146.0 154 56.5
Lsat_1_v5_gn_9_12821 Lactuca sativa HOM05D007485 ORTHO05D009437 3.3e-32 142.5 190 49.5
arahy.Tifrunner.gnm1.ann1.W4TMFE Arachis hypogaea HOM05D007485 ORTHO05D009437 4.3e-32 142.1 216 44.0
AT4G13220 Arabidopsis thaliana HOM05D007485 ORTHO05D009437 2.8e-31 139.4 165 50.3
Carub.0007s2945 Capsella rubella HOM05D007485 ORTHO05D009437 1.1e-30 137.5 165 49.7
AL9U10750 Arabidopsis lyrata HOM05D007485 ORTHO05D009437 1.4e-30 137.1 165 48.5
CARHR126310 Cardamine hirsuta HOM05D007485 ORTHO05D009437 1.8e-30 136.7 171 48.0
Sp7g10710 Schrenkiella parvula HOM05D007485 ORTHO05D009437 1.8e-30 136.7 164 50.0
MELO3C012792.2 Cucumis melo HOM05D007485 ORTHO05D009437 2.4e-30 136.3 193 49.2
BcaC07g38678 Brassica carinata HOM05D007485 ORTHO05D009437 9.0e-30 134.4 161 51.6
BolC8t49113H Brassica oleracea HOM05D007485 ORTHO05D009437 9.0e-30 134.4 161 51.6
Eucgr.C02436 Eucalyptus grandis HOM05D007485 ORTHO05D009437 9.0e-30 134.4 203 43.3
C08p14780 Brassica napus HOM05D007485 ORTHO05D009437 1.2e-29 134.0 161 50.9
A08p33350 Brassica napus HOM05D007485 ORTHO05D009437 1.5e-29 133.7 162 50.6
BraA08t35252Z Brassica rapa HOM05D007485 ORTHO05D009437 1.5e-29 133.7 161 50.9
CARHR218700 Cardamine hirsuta HOM05D007485 ORTHO05D009437 2.0e-29 133.3 165 49.1
Thhalv10026377m.g Eutrema salsugineum HOM05D007485 ORTHO05D009437 3.4e-29 132.5 164 50.0
THA.LOC104808772 Tarenaya hassleriana HOM05D007485 ORTHO05D009437 4.5e-29 132.1 175 44.6
CDE12G0678 Ceratophyllum demersum HOM05D007485 ORTHO05D009437 5.8e-29 131.7 105 63.8
TPR.G9157 Trifolium pratense HOM05D007485 ORTHO05D009437 5.8e-29 131.7 104 64.4
EL10Ac7g17803 Beta vulgaris HOM05D007485 ORTHO05D009437 9.9e-29 131.0 155 49.0
Aa31LG9G4570 Aethionema arabicum HOM05D007485 ORTHO05D009437 1.3e-28 130.6 166 48.8
ECA247G1773 Erigeron canadensis HOM05D007485 ORTHO05D009437 1.3e-28 130.6 107 67.3
HPP92_025808 Vanilla planifolia HOM05D007485 ORTHO05D009437 1.3e-28 130.6 108 63.9
BcaB03g13243 Brassica carinata HOM05D007485 ORTHO05D009437 4.9e-28 128.6 162 50.0
AUR62008887 Chenopodium quinoa HOM05D007485 ORTHO05D009437 1.1e-27 127.5 168 45.2
Sed0027911 Sechium edule HOM05D007485 ORTHO05D009437 4.2e-27 125.6 220 40.0
MBI10_g09190_MAGBIO Magnolia biondii HOM05D007485 ORTHO05D009437 7.1e-27 124.8 159 52.2
PSO017G5507 Papaver somniferum HOM05D007485 ORTHO05D009437 1.2e-26 124.0 148 52.0
PSO063G7151 Papaver somniferum HOM05D007485 ORTHO05D009437 1.2e-26 124.0 99 66.7
HanXRQChr15g0468381 Helianthus annuus HOM05D007485 ORTHO05D009437 2.1e-26 123.2 110 61.8
Aqoxy2G03844 Aquilegia oxysepala HOM05D007485 ORTHO05D009437 2.7e-26 122.9 139 52.5
Os12g0276100 Oryza sativa ssp. japonica HOM05D007485 ORTHO05D009437 6.0e-26 121.7 102 60.8
QL09p044412 Quercus lobata HOM05D007485 ORTHO05D009437 1.3e-25 120.6 143 50.3
Sc05g0002340 Simmondsia chinensis HOM05D007485 ORTHO05D009437 1.8e-25 120.2 157 49.0
unitig_0.g180 Utricularia gibba HOM05D007485 ORTHO05D009437 3.0e-25 119.4 158 48.1
AUR62031821 Chenopodium quinoa HOM05D007485 ORTHO05D009437 1.5e-24 117.1 166 43.4
Zm00001eb102490 Zea mays HOM05D007485 ORTHO05D009437 4.0e-22 109.0 103 57.3
COL.COLO4_36853 Corchorus olitorius HOM05D007485 ORTHO05D009437 4.5e-21 105.5 143 47.6
Zm00001eb317800 Zea mays HOM05D007485 ORTHO05D009437 6.4e-20 101.7 103 53.4
QL09p045086 Quercus lobata HOM05D007485 ORTHO05D009437 2.5e-16 89.7 57 77.2
ATR0088G060 Amborella trichopoda HOM05D007485 ORTHO05D009437 1.2e-13 80.9 56 69.6
Psat0s3317g0040 Pisum sativum HOM05D007485 ORTHO05D009437 3.4e-13 79.3 104 50.0
Hund18369 Selenicereus undatus HOM05D007485 ORTHO05D009437 4.5e-13 79.0 118 46.6
Pp3c25_600 Physcomitrium patens HOM05D007485 ORTHO05D009437 5.8e-13 78.6 98 44.9
HanXRQChr12g0377041 Helianthus annuus HOM05D007485 ORTHO05D009437 3.5e-10 69.3 54 66.7
CBR_g11056 Chara braunii HOM05D007485 ORTHO05D009437 5.7e-08 62.0 107 38.3


User provided reference genes

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