Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001737g0060 Nicotiana tabacum HOM05D005974 ORTHO05D007201 1.3e-235 819.3 416 100.0
Nitab4.5_0001309g0090 Nicotiana tabacum HOM05D005974 ORTHO05D007201 1.4e-205 719.5 418 89.2
Solyc12g095850.2 Solanum lycopersicum HOM05D005974 ORTHO05D007201 2.2e-190 669.1 419 83.3
CAN.G208.66 Capsicum annuum HOM05D005974 ORTHO05D007201 1.0e-187 660.2 423 83.5
Sopen12g031750 Solanum pennellii HOM05D005974 ORTHO05D007201 1.8e-187 659.4 419 82.3
COL.COLO4_20996 Corchorus olitorius HOM05D005974 ORTHO05D007201 2.9e-174 615.5 421 76.2
Oeu006965.1 Olea europaea HOM05D005974 ORTHO05D007201 4.2e-173 611.7 417 75.3
Migut.E01538 Erythranthe guttata HOM05D005974 ORTHO05D007201 5.5e-173 611.3 419 74.7
Dinv23389 Davidia involucrata HOM05D005974 ORTHO05D007201 2.7e-172 609.0 421 75.8
MSTRG.14030 Avicennia marina HOM05D005974 ORTHO05D007201 1.0e-171 607.1 421 75.1
Manes.03G060100 Manihot esculenta HOM05D005974 ORTHO05D007201 1.0e-171 607.1 419 75.4
RcHm_v2.0_Chr6g0306611 Rosa chinensis HOM05D005974 ORTHO05D007201 1.4e-171 606.7 422 74.4
GSVIVG01035293001 Vitis vinifera HOM05D005974 ORTHO05D007201 2.3e-171 605.9 421 74.1
Gohir.D06G091000 Gossypium hirsutum HOM05D005974 ORTHO05D007201 1.5e-170 603.2 421 74.1
Gorai.010G105000 Gossypium raimondii HOM05D005974 ORTHO05D007201 2.6e-170 602.4 420 74.0
FAN27G3236 Fragaria x ananassa HOM05D005974 ORTHO05D007201 5.7e-170 601.3 424 73.6
PGR044G0481 Punica granatum HOM05D005974 ORTHO05D007201 7.5e-170 600.9 422 74.2
FvH4_2g35300 Fragaria vesca HOM05D005974 ORTHO05D007201 1.7e-169 599.7 424 73.3
SalBow1G5620 Salvia bowleyana HOM05D005974 ORTHO05D007201 1.7e-169 599.7 448 70.8
Ciclev10010686m.g Citrus clementina HOM05D005974 ORTHO05D007201 6.3e-169 597.8 424 74.5
FAN15G0062 Fragaria x ananassa HOM05D005974 ORTHO05D007201 6.3e-169 597.8 424 73.1
FAN20G0082 Fragaria x ananassa HOM05D005974 ORTHO05D007201 2.4e-168 595.9 424 72.4
Gohir.A06G091700 Gossypium hirsutum HOM05D005974 ORTHO05D007201 2.4e-168 595.9 421 73.6
Thecc.09G047600 Theobroma cacao HOM05D005974 ORTHO05D007201 3.1e-168 595.5 417 73.4
Cpa.g.sc7.214 Carica papaya HOM05D005974 ORTHO05D007201 5.3e-168 594.7 418 73.0
SGA_v2.0_scaffold169G38660 Striga asiatica HOM05D005974 ORTHO05D007201 5.3e-168 594.7 422 72.5
CsaV3_3G048470 Cucumis sativus L. HOM05D005974 ORTHO05D007201 1.6e-167 593.2 419 72.8
CANSAT80G2257 Cannabis sativa HOM05D005974 ORTHO05D007201 2.0e-167 592.8 420 73.1
HanXRQChr06g0174221 Helianthus annuus HOM05D005974 ORTHO05D007201 2.0e-167 592.8 441 70.5
CSS0034694 Camellia sinensis var. sinensis HOM05D005974 ORTHO05D007201 2.7e-167 592.4 422 73.0
Cc08_g09880 Coffea canephora HOM05D005974 ORTHO05D007201 2.2e-166 589.3 419 74.2
Potri.003G158000 Populus trichocarpa HOM05D005974 ORTHO05D007201 3.8e-166 588.6 420 72.9
HanXRQChr17g0539061 Helianthus annuus HOM05D005974 ORTHO05D007201 8.5e-166 587.4 421 72.7
TWI63G1635 Tripterygium wilfordii HOM05D005974 ORTHO05D007201 8.5e-166 587.4 423 72.3
Eucgr.C02982 Eucalyptus grandis HOM05D005974 ORTHO05D007201 1.1e-165 587.0 418 73.2
MD15G1090800 Malus domestica HOM05D005974 ORTHO05D007201 1.1e-165 587.0 428 71.7
CiPaw.08G027100 Carya illinoinensis HOM05D005974 ORTHO05D007201 1.5e-165 586.6 422 72.5
PGR044G1757 Punica granatum HOM05D005974 ORTHO05D007201 7.2e-165 584.3 421 72.9
MELO3C003472.2 Cucumis melo HOM05D005974 ORTHO05D007201 9.4e-165 583.9 428 71.3
Actinidia30286 Actinidia chinensis HOM05D005974 ORTHO05D007201 2.7e-164 582.4 422 71.3
Atru.chr7.2057 Acer truncatum HOM05D005974 ORTHO05D007201 3.6e-164 582.0 422 72.7
Sc09g0009450 Simmondsia chinensis HOM05D005974 ORTHO05D007201 1.0e-163 580.5 417 72.9
EL10Ac5g11988 Beta vulgaris HOM05D005974 ORTHO05D007201 1.8e-163 579.7 423 71.4
Rhsim02G0175300 Rhododendron simsii HOM05D005974 ORTHO05D007201 2.3e-163 579.3 423 70.9
Lsat_1_v5_gn_3_25800 Lactuca sativa HOM05D005974 ORTHO05D007201 4.0e-163 578.6 421 71.3
ECA246G2549 Erigeron canadensis HOM05D005974 ORTHO05D007201 1.5e-162 576.6 420 71.7
PSO832G2350 Papaver somniferum HOM05D005974 ORTHO05D007201 1.7e-161 573.2 426 69.7
arahy.Tifrunner.gnm1.ann1.I5HST9 Arachis hypogaea HOM05D005974 ORTHO05D007201 3.7e-161 572.0 374 76.7
Sabra03G0114600 Salix brachista HOM05D005974 ORTHO05D007201 4.1e-160 568.5 400 74.5
PSO063G5342 Papaver somniferum HOM05D005974 ORTHO05D007201 3.2e-157 558.9 426 67.8
arahy.Tifrunner.gnm1.ann1.CL6SAC Arachis hypogaea HOM05D005974 ORTHO05D007201 4.7e-156 555.1 415 69.9
Dinv27921 Davidia involucrata HOM05D005974 ORTHO05D007201 4.7e-156 555.1 421 69.8
Glyma.04G086500 Glycine max HOM05D005974 ORTHO05D007201 6.1e-156 554.7 412 70.9
Peaxi162Scf00064g01533 Petunia axillaris HOM05D005974 ORTHO05D007201 2.3e-155 552.7 418 72.7
ClCG11G015070 Citrullus lanatus HOM05D005974 ORTHO05D007201 1.5e-154 550.1 361 78.4
Glyma.06G088000 Glycine max HOM05D005974 ORTHO05D007201 2.0e-154 549.7 414 69.6
Aqoxy7G01418 Aquilegia oxysepala HOM05D005974 ORTHO05D007201 5.7e-154 548.1 440 67.3
Lalb_Chr08g0242951 Lupinus albus HOM05D005974 ORTHO05D007201 1.3e-153 547.0 363 75.5
AUR62018617 Chenopodium quinoa HOM05D005974 ORTHO05D007201 1.7e-153 546.6 347 78.7
TPR.G12488 Trifolium pratense HOM05D005974 ORTHO05D007201 1.7e-153 546.6 382 71.7
Lj1g0014442 Lotus japonicus HOM05D005974 ORTHO05D007201 3.7e-153 545.4 411 68.9
ATR0705G128 Amborella trichopoda HOM05D005974 ORTHO05D007201 3.1e-152 542.3 397 70.5
Ca_15573_v3 Cicer arietinum L. HOM05D005974 ORTHO05D007201 3.1e-152 542.3 364 74.5
Medtr3g110360 Medicago truncatula HOM05D005974 ORTHO05D007201 3.1e-152 542.3 367 73.8
Os01g0743400 Oryza sativa ssp. japonica HOM05D005974 ORTHO05D007201 9.2e-152 540.8 372 74.2
THA.LOC104803747 Tarenaya hassleriana HOM05D005974 ORTHO05D007201 3.5e-151 538.9 424 67.0
QL12p041028 Quercus lobata HOM05D005974 ORTHO05D007201 5.9e-151 538.1 345 79.4
Phvul.009G111700 Phaseolus vulgaris HOM05D005974 ORTHO05D007201 1.7e-150 536.6 380 71.8
TAR624G1429 Trochodendron aralioides HOM05D005974 ORTHO05D007201 1.9e-149 533.1 355 77.2
Sed0012339 Sechium edule HOM05D005974 ORTHO05D007201 3.3e-149 532.3 345 78.6
A03p15570 Brassica napus HOM05D005974 ORTHO05D007201 1.7e-145 520.0 366 72.1
BcaC01g06194 Brassica carinata HOM05D005974 ORTHO05D007201 2.9e-145 519.2 390 68.5
BolC3t14221H Brassica oleracea HOM05D005974 ORTHO05D007201 2.9e-145 519.2 390 68.5
Sp4g05700 Schrenkiella parvula HOM05D005974 ORTHO05D007201 1.8e-144 516.5 395 67.3
BcaB01g04210 Brassica carinata HOM05D005974 ORTHO05D007201 3.2e-144 515.8 365 71.0
CARHR115390 Cardamine hirsuta HOM05D005974 ORTHO05D007201 1.2e-143 513.8 417 64.5
A04p20060 Brassica napus HOM05D005974 ORTHO05D007201 5.9e-143 511.5 365 70.4
BraA04t17588Z Brassica rapa HOM05D005974 ORTHO05D007201 5.9e-143 511.5 365 70.4
AL4G17680 Arabidopsis lyrata HOM05D005974 ORTHO05D007201 3.0e-142 509.2 371 67.9
C04p55740 Brassica napus HOM05D005974 ORTHO05D007201 3.0e-142 509.2 435 62.8
C03p18200 Brassica napus HOM05D005974 ORTHO05D007201 8.6e-142 507.7 360 70.8
BolC4t27100H Brassica oleracea HOM05D005974 ORTHO05D007201 8.6e-142 507.7 391 67.0
Thhalv10002006m.g Eutrema salsugineum HOM05D005974 ORTHO05D007201 1.5e-141 506.9 393 66.9
AT2G25840 Arabidopsis thaliana HOM05D005974 ORTHO05D007201 1.2e-140 503.8 371 67.4
Carub.0004s0567 Capsella rubella HOM05D005974 ORTHO05D007201 2.1e-140 503.1 371 68.2
MBI04_g20303_MAGBIO Magnolia biondii HOM05D005974 ORTHO05D007201 2.1e-140 503.1 418 65.6
BraA03t10849Z Brassica rapa HOM05D005974 ORTHO05D007201 2.8e-140 502.7 347 72.9
CDE02G2857 Ceratophyllum demersum HOM05D005974 ORTHO05D007201 3.6e-140 502.3 298 81.9
Lj8C569G5 Lonicera japonica HOM05D000602 ORTHO05D001147 3.6e-140 502.3 419 64.9
Thhalv10002003m.g Eutrema salsugineum HOM05D005974 ORTHO05D007201 1.0e-139 500.7 389 65.8
Duzib187G1338 Durio zibethinus HOM05D005974 ORTHO05D007201 1.3e-137 493.8 377 70.6
Psat5g020640 Pisum sativum HOM05D005974 ORTHO05D007201 4.9e-137 491.9 307 77.9
VMungo1309G1913 Vigna mungo HOM05D005974 ORTHO05D007201 6.4e-137 491.5 280 85.0
AagrBONN_evm.TU.Sc2ySwM_344.1805 Anthoceros agrestis HOM05D005974 ORTHO05D007201 3.2e-136 489.2 360 67.2
HPP92_024453 Vanilla planifolia HOM05D005974 ORTHO05D007201 1.9e-133 479.9 420 62.6
DCAR_018521 Daucus carota HOM05D005974 ORTHO05D007201 5.6e-133 478.4 303 79.2
Aa31LG5G9820 Aethionema arabicum HOM05D005974 ORTHO05D007201 8.1e-132 474.6 381 65.1
BcaB06g29640 Brassica carinata HOM05D005974 ORTHO05D007201 8.1e-132 474.6 391 63.9
vmacro11047 Vaccinium macrocarpon HOM05D005974 ORTHO05D007201 8.1e-132 474.6 366 69.7
Mapoly0137s0001 Marchantia polymorpha HOM05D005974 ORTHO05D007201 2.6e-130 469.5 436 56.7
AUR62007372 Chenopodium quinoa HOM05D005974 ORTHO05D007201 6.4e-129 464.9 380 65.0
Pp3c13_12220 Physcomitrium patens HOM05D005974 ORTHO05D007201 2.7e-127 459.5 369 62.9
Prupe.1G445200 Prunus persica HOM05D005974 ORTHO05D007201 3.3e-125 452.6 303 76.9
SMO116G0397 Selaginella moellendorffii HOM05D005974 ORTHO05D007201 7.1e-120 434.9 354 62.7
SGA_v2.0_scaffold163G38058 Striga asiatica HOM05D005974 ORTHO05D007201 1.8e-115 420.2 349 64.2
Nn7g37050 Nelumbo nucifera HOM05D005974 ORTHO05D007201 2.2e-113 413.3 419 55.8
PRCOL_00006768 Prasinoderma coloniale HOM05D005974 ORTHO05D007201 1.0e-110 404.4 345 59.4
Cre05.g238322 Chlamydomonas reinhardtii HOM05D005974 ORTHO05D007201 1.6e-108 397.1 359 56.0
MCO14G391 Micromonas commoda HOM05D005974 ORTHO05D007201 1.2e-106 391.0 379 54.4
Hund14385 Selenicereus undatus HOM05D005974 ORTHO05D007201 1.1e-104 384.4 258 76.0
Zm00001eb153590 Zea mays HOM05D005974 ORTHO05D007201 1.9e-93 347.1 255 71.0
BcaB06g29641 Brassica carinata HOM05D005974 ORTHO05D007201 5.5e-88 328.9 236 71.6
Gohir.D06G090920 Gossypium hirsutum HOM05D005974 ORTHO05D007201 2.1e-84 317.0 217 75.6
HanXRQChr06g0174211 Helianthus annuus HOM05D005974 ORTHO05D007201 3.3e-77 293.1 207 72.9
Haze_27433 Corylus avellana HOM05D005974 ORTHO05D007201 1.9e-64 250.8 278 48.2
CBR_g26161 Chara braunii HOM05D005974 ORTHO05D007201 7.4e-61 238.8 208 59.6
Haze_21915 Corylus avellana HOM05D005974 ORTHO05D007201 1.6e-47 194.5 127 81.9
Cfa024571 Carpinus fangiana HOM05D005974 ORTHO05D007201 1.7e-41 174.5 331 36.3
SEGI_40033 Sequoiadendron giganteum HOM05D005974 ORTHO05D007201 3.3e-32 143.7 85 74.1
CDE08G1286 Ceratophyllum demersum HOM05D000581 ORTHO05D000412 6.8e-30 136.0 88 73.9
Ah.07g201090 Amaranthus hybridus HOM05D005974 ORTHO05D007201 1.2e-26 125.2 246 36.2
Lsat_1_v5_gn_5_27580 Lactuca sativa HOM05D005974 ORTHO05D007201 1.3e-25 121.7 214 37.4
Hund30885 Selenicereus undatus HOM05D005974 ORTHO05D007201 1.3e-25 121.7 123 57.7
Hund30611 Selenicereus undatus HOM05D005974 ORTHO05D007201 3.0e-25 120.6 123 56.9
Gohir.A05G045550 Gossypium hirsutum HOM05D005974 ORTHO05D007201 6.8e-22 109.4 211 39.8
Lsat_1_v5_gn_9_95260 Lactuca sativa HOM05D005974 ORTHO05D007201 6.0e-18 96.3 139 45.3
arahy.Tifrunner.gnm1.ann1.05PEK3 Arachis hypogaea HOM05D005974 ORTHO05D038942 3.0e-17 94.0 70 57.1
SEGI_31887 Sequoiadendron giganteum HOM05D005974 ORTHO05D007201 1.9e-16 91.3 101 49.5
Gohir.D06G090940 Gossypium hirsutum HOM05D005974 ORTHO05D007201 6.8e-14 82.8 46 80.4
Lsat_1_v5_gn_1_66781 Lactuca sativa HOM05D000921 ORTHO05D002852 1.7e-12 78.2 112 46.4
VMungo1309G1904 Vigna mungo HOM05D005974 ORTHO05D007201 4.1e-11 73.6 45 75.6
TAR383G0536 Trochodendron aralioides HOM05D005974 ORTHO05D007201 8.6e-09 65.9 64 53.1
PSO170G5577 Papaver somniferum HOM05D005974 ORTHO05D038942 3.3e-08 63.9 50 58.0
CBR_g26165 Chara braunii HOM05D005974 ORTHO05D007201 4.3e-08 63.5 94 41.5


User provided reference genes

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