Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001726g0150 Nicotiana tabacum HOM05D004542 ORTHO05D005380 2.5e-40 168.3 85 100.0
Haze_11968 Corylus avellana HOM05D004542 ORTHO05D005380 3.6e-10 68.2 78 53.8
Rhsim05G0092000 Rhododendron simsii HOM05D004542 ORTHO05D005380 3.3e-08 61.6 75 50.7
RhsimUnG0183400 Rhododendron simsii HOM05D004542 ORTHO05D005380 3.3e-08 61.6 75 50.7
Sabra08G0067500 Salix brachista HOM05D004542 ORTHO05D005380 6.3e-07 57.4 29 82.8
Ah.15g093720 Amaranthus hybridus HOM05D000143 ORTHO05D000072 1.1e-06 56.6 28 89.3
Nitab4.5_0000391g0330 Nicotiana tabacum HOM05D004542 ORTHO05D005380 2.4e-06 55.5 26 92.3
Nitab4.5_0013306g0010 Nicotiana tabacum HOM05D004542 ORTHO05D005380 2.4e-06 55.5 26 92.3
Solyc05g013190.4 Solanum lycopersicum HOM05D004542 ORTHO05D005380 2.4e-06 55.5 26 92.3
Sopen05g007930 Solanum pennellii HOM05D004542 ORTHO05D005380 2.4e-06 55.5 26 92.3
vmacro01352 Vaccinium macrocarpon HOM05D004542 ORTHO05D005380 2.4e-06 55.5 26 92.3
COL.COLO4_32021 Corchorus olitorius HOM05D004542 ORTHO05D005380 5.3e-06 54.3 66 45.5
CSS0014017 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 6.9e-06 53.9 26 88.5
CSS0031140 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 6.9e-06 53.9 26 88.5
Cpa.g.sc57.38 Carica papaya HOM05D004542 ORTHO05D005380 6.9e-06 53.9 26 88.5
Cpa.g.sc69.70 Carica papaya HOM05D004542 ORTHO05D005380 6.9e-06 53.9 26 88.5
Cc00_g16630 Coffea canephora HOM05D004542 ORTHO05D005380 6.9e-06 53.9 26 88.5
Oeu001710.1 Olea europaea HOM05D004542 ORTHO05D005380 6.9e-06 53.9 26 88.5
Oeu054854.1 Olea europaea HOM05D004542 ORTHO05D005380 6.9e-06 53.9 26 88.5
Peaxi162Scf00023g02531 Petunia axillaris HOM05D004542 ORTHO05D005380 6.9e-06 53.9 26 88.5
Peaxi162Scf00222g00329 Petunia axillaris HOM05D004542 ORTHO05D005380 6.9e-06 53.9 26 88.5
Solyc04g005590.3 Solanum lycopersicum HOM05D004542 ORTHO05D005380 6.9e-06 53.9 26 88.5
Sopen04g001630 Solanum pennellii HOM05D004542 ORTHO05D005380 6.9e-06 53.9 26 88.5
PGSC0003DMG400002854 Solanum tuberosum HOM05D004542 ORTHO05D005380 6.9e-06 53.9 26 88.5
CiPaw.06G087700 Carya illinoinensis HOM05D004542 ORTHO05D005380 9.1e-06 53.5 26 88.5
ClCG05G024060 Citrullus lanatus HOM05D004542 ORTHO05D005380 9.1e-06 53.5 26 88.5
Sc03g0001820 Simmondsia chinensis HOM05D004542 ORTHO05D005380 9.1e-06 53.5 26 84.6
Sc14g0007580 Simmondsia chinensis HOM05D004542 ORTHO05D005380 9.1e-06 53.5 26 88.5


User provided reference genes

Program Settings