Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 2.5e-59 231.9 115 100.0
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 1.2e-53 213.0 115 91.3
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 1.4e-49 199.5 114 86.8
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 4.0e-49 198.0 114 86.8
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 6.9e-49 197.2 109 89.9
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 6.9e-49 197.2 113 87.6
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 1.5e-48 196.1 115 87.8
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 2.9e-47 191.8 115 85.2
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 7.9e-45 183.7 114 81.6
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 6.2e-42 174.1 114 78.1
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 4.5e-40 167.9 114 71.9
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 3.0e-36 155.2 114 71.1
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 3.0e-36 155.2 114 71.1
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 5.1e-36 154.5 114 69.3
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 8.7e-36 153.7 114 69.3
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 8.7e-36 153.7 113 70.8
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 3.3e-35 151.8 112 67.9
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 3.3e-35 151.8 115 67.8
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 5.6e-35 151.0 115 67.8
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 1.6e-34 149.4 113 67.3
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 1.6e-34 149.4 112 67.0
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 1.6e-34 149.4 112 64.3
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 2.1e-34 149.1 115 67.8
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 2.8e-34 148.7 111 70.3
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 3.7e-34 148.3 114 68.4
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 4.8e-34 147.9 111 69.4
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 4.8e-34 147.9 104 69.2
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 6.2e-34 147.5 104 70.2
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 1.1e-33 146.7 111 65.8
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 1.4e-33 146.4 103 68.9
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 1.8e-33 146.0 110 65.5
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 1.8e-33 146.0 117 67.5
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 2.4e-33 145.6 114 64.9
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 6.9e-33 144.1 112 66.1
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 9.0e-33 143.7 114 63.2
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 9.0e-33 143.7 114 63.2
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 9.0e-33 143.7 103 68.0
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 9.0e-33 143.7 106 65.1
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 1.2e-32 143.3 114 62.3
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 1.2e-32 143.3 111 62.2
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 1.2e-32 143.3 103 66.0
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 1.2e-32 143.3 111 65.8
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 2.0e-32 142.5 132 59.8
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 2.0e-32 142.5 114 66.7
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 2.0e-32 142.5 112 67.0
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 2.6e-32 142.1 102 69.6
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 2.6e-32 142.1 112 66.1
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 2.6e-32 142.1 112 67.0
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 3.4e-32 141.7 103 65.0
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 3.4e-32 141.7 105 65.7
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 3.4e-32 141.7 111 64.9
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 4.5e-32 141.4 115 65.2
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 4.5e-32 141.4 112 66.1
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 4.5e-32 141.4 117 65.0
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 4.5e-32 141.4 116 63.8
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 5.8e-32 141.0 112 62.5
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 5.8e-32 141.0 113 64.6
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 7.6e-32 140.6 111 65.8
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 1.3e-31 139.8 114 61.4
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 1.3e-31 139.8 114 63.2
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 1.7e-31 139.4 103 66.0
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 1.7e-31 139.4 112 61.6
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 1.7e-31 139.4 112 63.4
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 1.7e-31 139.4 112 65.2
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 2.2e-31 139.0 103 66.0
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 2.2e-31 139.0 106 64.2
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 2.9e-31 138.7 104 66.3
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 2.9e-31 138.7 112 65.2
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 2.9e-31 138.7 106 63.2
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 3.8e-31 138.3 105 65.7
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 3.8e-31 138.3 106 63.2
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 3.8e-31 138.3 112 62.5
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 4.9e-31 137.9 112 65.2
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 4.9e-31 137.9 112 63.4
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 4.9e-31 137.9 140 56.4
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 6.5e-31 137.5 105 65.7
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 6.5e-31 137.5 112 64.3
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 8.4e-31 137.1 112 60.7
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 8.4e-31 137.1 103 65.0
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 1.4e-30 136.3 109 63.3
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.9e-30 136.0 104 64.4
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 2.5e-30 135.6 103 65.0
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 2.5e-30 135.6 103 63.1
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 2.5e-30 135.6 103 64.1
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 2.5e-30 135.6 105 65.7
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 2.5e-30 135.6 112 62.5
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 4.2e-30 134.8 103 64.1
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 4.2e-30 134.8 103 64.1
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 4.2e-30 134.8 103 64.1
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 4.2e-30 134.8 105 61.9
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 5.5e-30 134.4 112 63.4
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 7.1e-30 134.0 109 64.2
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 9.3e-30 133.7 110 60.0
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 9.3e-30 133.7 112 64.3
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 1.6e-29 132.9 104 62.5
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 2.1e-29 132.5 107 63.6
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 2.1e-29 132.5 106 60.4
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 2.7e-29 132.1 113 61.1
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 2.7e-29 132.1 105 61.0
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 2.7e-29 132.1 107 62.6
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 2.7e-29 132.1 107 62.6
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 3.5e-29 131.7 113 61.1
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 3.5e-29 131.7 113 60.2
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 7.9e-29 130.6 107 61.7
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 7.9e-29 130.6 107 61.7
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 1.0e-28 130.2 101 65.3
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 1.8e-28 129.4 111 62.2
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 3.0e-28 128.6 100 62.0
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 3.9e-28 128.3 107 60.7
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 3.9e-28 128.3 107 60.7
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 1.9e-27 125.9 118 58.5
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 3.3e-27 125.2 103 59.2
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 9.6e-27 123.6 103 62.1
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 9.6e-27 123.6 102 61.8
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 1.6e-26 122.9 104 57.7
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 1.1e-25 120.2 103 58.3
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 2.9e-23 112.1 103 58.3
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 6.5e-23 110.9 108 54.6
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 3.2e-22 108.6 108 53.7
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 5.7e-19 97.8 87 56.3
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 1.6e-18 96.3 107 48.6
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 2.2e-18 95.9 105 51.4
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 1.8e-17 92.8 107 46.7
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 3.1e-17 92.0 63 66.7
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 2.6e-16 89.0 102 43.1
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 2.9e-15 85.5 102 45.1
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 3.2e-14 82.0 78 52.6
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 3.2e-14 82.0 82 56.1
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 9.4e-14 80.5 80 50.0
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 2.7e-13 79.0 67 56.7
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 1.0e-12 77.0 76 55.3
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 2.0e-11 72.8 89 48.3
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 4.8e-10 68.2 75 52.0
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 9.1e-09 63.9 112 41.1
SEGI_15077 Sequoiadendron giganteum HOM05D002017 ORTHO05D007006 2.6e-08 62.4 82 46.3
CBR_g23899 Chara braunii HOM05D005755 ORTHO05D007006 2.5e-06 55.8 96 34.4


User provided reference genes

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