Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001714g0210 Nicotiana tabacum HOM05D007750 ORTHO05D009803 1.7e-42 177.9 85 100.0
Nitab4.5_0007891g0010 Nicotiana tabacum HOM05D007750 ORTHO05D009803 4.7e-37 159.8 85 89.4
PGSC0003DMG400022754 Solanum tuberosum HOM05D007750 ORTHO05D009803 2.8e-34 150.6 85 84.7
Sopen08g028580 Solanum pennellii HOM05D007750 ORTHO05D009803 2.9e-31 140.6 85 80.0
CAN.G981.43 Capsicum annuum HOM05D007750 ORTHO05D009803 4.7e-29 133.3 84 77.4
Cfa011507 Carpinus fangiana HOM05D007750 ORTHO05D009803 8.6e-23 112.5 85 58.8
Rhsim13G0082600 Rhododendron simsii HOM05D007750 ORTHO05D009803 1.9e-22 111.3 85 57.6
CSS0037746 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 3.3e-22 110.5 85 57.6
Haze_24099 Corylus avellana HOM05D007750 ORTHO05D009803 7.3e-22 109.4 85 57.6
CSS0028051 Camellia sinensis var. sinensis HOM05D007750 ORTHO05D009803 2.8e-21 107.5 84 56.0
QL01p031803 Quercus lobata HOM05D007750 ORTHO05D009803 4.7e-21 106.7 85 57.6
Atru.chr3.3911 Acer truncatum HOM05D007750 ORTHO05D009803 1.4e-20 105.1 85 55.3
MD03G1092900 Malus domestica HOM05D007750 ORTHO05D009803 1.8e-20 104.8 85 55.3
GSVIVG01024955001 Vitis vinifera HOM05D007750 ORTHO05D009803 3.1e-20 104.0 84 57.1
FAN25G2068 Fragaria x ananassa HOM05D007750 ORTHO05D009803 5.2e-20 103.2 85 50.6
RcHm_v2.0_Chr5g0064911 Rosa chinensis HOM05D007750 ORTHO05D009803 6.8e-20 102.8 85 52.9
FvH4_3g36170 Fragaria vesca HOM05D007750 ORTHO05D009803 8.9e-20 102.4 85 51.8
FAN11G0214 Fragaria x ananassa HOM05D007750 ORTHO05D009803 8.9e-20 102.4 85 51.8
FAN21G3841 Fragaria x ananassa HOM05D007750 ORTHO05D009803 8.9e-20 102.4 85 50.6
FAN16G0393 Fragaria x ananassa HOM05D007750 ORTHO05D009803 1.2e-19 102.1 85 50.6
Gohir.D03G125600 Gossypium hirsutum HOM05D007750 ORTHO05D009803 2.6e-19 100.9 84 57.1
Gorai.003G131800 Gossypium raimondii HOM05D007750 ORTHO05D009803 2.6e-19 100.9 84 57.1
Lj1P153T20 Lonicera japonica HOM05D007750 ORTHO05D009803 2.6e-19 100.9 85 51.8
CANSAT54G1947 Cannabis sativa HOM05D007750 ORTHO05D009803 4.4e-19 100.1 85 51.8
Cpa.g.sc81.142 Carica papaya HOM05D007750 ORTHO05D009803 5.8e-19 99.8 84 52.4
Gohir.A03G042099 Gossypium hirsutum HOM05D007750 ORTHO05D009803 5.8e-19 99.8 84 56.0
CiPaw.13G094000 Carya illinoinensis HOM05D007750 ORTHO05D009803 9.8e-19 99.0 85 55.3
Prupe.6G076800 Prunus persica HOM05D007750 ORTHO05D009803 1.7e-18 98.2 84 54.8
Thecc.09G321000 Theobroma cacao HOM05D007750 ORTHO05D009803 2.9e-18 97.4 85 54.1
Thhalv10028537m.g Eutrema salsugineum HOM05D007750 ORTHO05D009803 3.7e-18 97.1 85 50.6
Sabra17G0109600 Salix brachista HOM05D007750 ORTHO05D009803 3.7e-18 97.1 85 51.8
Migut.N02392 Erythranthe guttata HOM05D007750 ORTHO05D009803 4.9e-18 96.7 85 47.1
TAR623G1496 Trochodendron aralioides HOM05D007750 ORTHO05D009803 4.9e-18 96.7 85 52.9
Lalb_Chr12g0196171 Lupinus albus HOM05D007750 ORTHO05D009803 6.4e-18 96.3 85 55.3
Manes.02G132900 Manihot esculenta HOM05D007750 ORTHO05D009803 6.4e-18 96.3 81 55.6
CARHR254670 Cardamine hirsuta HOM05D007750 ORTHO05D009803 1.4e-17 95.1 85 50.6
Lj2g0016115 Lotus japonicus HOM05D007750 ORTHO05D009803 1.4e-17 95.1 85 50.6
AL6G46300 Arabidopsis lyrata HOM05D007750 ORTHO05D009803 2.4e-17 94.4 85 49.4
AL6G46430 Arabidopsis lyrata HOM05D007750 ORTHO05D009803 2.4e-17 94.4 85 49.4
A09p27430 Brassica napus HOM05D007750 ORTHO05D009803 2.4e-17 94.4 85 50.6
Ca_04398_v3 Cicer arietinum L. HOM05D007750 ORTHO05D009803 3.2e-17 94.0 85 52.9
RcHm_v2.0_Chr5g0064671 Rosa chinensis HOM05D007750 ORTHO05D009803 3.2e-17 94.0 85 51.8
SalBow3G4043 Salvia bowleyana HOM05D007750 ORTHO05D009803 3.2e-17 94.0 84 48.8
THA.LOC104801704 Tarenaya hassleriana HOM05D007750 ORTHO05D009803 4.1e-17 93.6 85 50.6
Psat1g083360 Pisum sativum HOM05D007750 ORTHO05D009803 5.4e-17 93.2 85 51.8
C09p34750 Brassica napus HOM05D007750 ORTHO05D009803 9.2e-17 92.4 85 49.4
BolC9t56321H Brassica oleracea HOM05D007750 ORTHO05D009803 9.2e-17 92.4 85 49.4
Duzib150G0757 Durio zibethinus HOM05D007750 ORTHO05D009803 9.2e-17 92.4 85 51.8
Aqoxy7G03815 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 1.6e-16 91.7 85 50.6
Carub.0006s3078 Capsella rubella HOM05D007750 ORTHO05D009803 1.6e-16 91.7 85 48.2
Cc01_g12900 Coffea canephora HOM05D007750 ORTHO05D009803 1.6e-16 91.7 85 50.6
TPR.G7494 Trifolium pratense HOM05D007750 ORTHO05D009803 1.6e-16 91.7 85 50.6
arahy.Tifrunner.gnm1.ann1.7C1NTJ Arachis hypogaea HOM05D007750 ORTHO05D009803 2.0e-16 91.3 77 54.5
Phvul.003G092000 Phaseolus vulgaris HOM05D007750 ORTHO05D009803 2.0e-16 91.3 85 50.6
VMungo1215G1573 Vigna mungo HOM05D007750 ORTHO05D009803 2.0e-16 91.3 84 51.2
COL.COLO4_18513 Corchorus olitorius HOM05D007750 ORTHO05D009803 2.7e-16 90.9 84 51.2
Glyma.07G217200 Glycine max HOM05D007750 ORTHO05D009803 2.7e-16 90.9 85 52.9
Medtr6g022260 Medicago truncatula HOM05D007750 ORTHO05D009803 2.7e-16 90.9 84 51.2
Nn1g04208 Nelumbo nucifera HOM05D007750 ORTHO05D009803 2.7e-16 90.9 83 48.2
Aqoxy496s001 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 3.5e-16 90.5 85 50.6
Aqoxy4G02931 Aquilegia oxysepala HOM05D007750 ORTHO05D009803 3.5e-16 90.5 85 50.6
BraA09t38312Z Brassica rapa HOM05D007750 ORTHO05D009803 3.5e-16 90.5 85 48.2
SGA_v2.0_scaffold9G04983 Striga asiatica HOM05D007750 ORTHO05D009803 3.5e-16 90.5 84 48.8
Glyma.06G033500 Glycine max HOM05D007750 ORTHO05D009803 4.6e-16 90.1 85 51.8
Phvul.003G091900 Phaseolus vulgaris HOM05D007750 ORTHO05D009803 7.8e-16 89.4 85 49.4
Sp6g05780 Schrenkiella parvula HOM05D007750 ORTHO05D009803 7.8e-16 89.4 82 51.2
Aa31LG9G10670 Aethionema arabicum HOM05D007750 ORTHO05D009803 2.3e-15 87.8 84 47.6
EL10Ac5g12003 Beta vulgaris HOM05D007750 ORTHO05D009803 2.3e-15 87.8 85 45.9
AUR62018631 Chenopodium quinoa HOM05D007750 ORTHO05D009803 3.0e-15 87.4 85 50.6
Oeu012315.1 Olea europaea HOM05D007750 ORTHO05D009803 1.1e-14 85.5 85 43.5
arahy.Tifrunner.gnm1.ann1.T5BWJF Arachis hypogaea HOM05D007750 ORTHO05D009803 4.3e-14 83.6 81 49.4
ClCG09G016230 Citrullus lanatus HOM05D007750 ORTHO05D009803 1.2e-13 82.0 85 43.5
Glyma.17G016400 Glycine max HOM05D007750 ORTHO05D009803 1.2e-13 82.0 85 48.2
Hma1.2p1_0418F.1_g149220 Hydrangea macrophylla HOM05D007750 ORTHO05D009803 1.6e-13 81.6 59 59.3
Eucgr.H02967 Eucalyptus grandis HOM05D007750 ORTHO05D009803 4.7e-13 80.1 86 41.9
MBI14_g36920_MAGBIO Magnolia biondii HOM05D002509 ORTHO05D002758 8.1e-13 79.3 85 41.2
PGR083G0657 Punica granatum HOM05D007750 ORTHO05D009803 4.0e-12 77.0 85 45.9
Sc21g0005800 Simmondsia chinensis HOM05D007750 ORTHO05D009803 3.4e-11 73.9 84 42.9
CsaV3_7G007090 Cucumis sativus L. HOM05D007750 ORTHO05D009803 1.3e-10 72.0 81 42.0
Potri.017G131600 Populus trichocarpa HOM05D007750 ORTHO05D009803 5.4e-09 66.6 85 41.2
ATR0559G149 Amborella trichopoda HOM05D007750 ORTHO05D009803 7.1e-09 66.2 84 38.1
AT4G11690 Arabidopsis thaliana HOM05D007750 ORTHO05D009803 2.7e-08 64.3 86 36.0
BcaB01g01674 Brassica carinata HOM05D007750 ORTHO05D009803 1.3e-07 62.0 66 42.4
Glyma.07G257600 Glycine max HOM05D007750 ORTHO05D009803 1.7e-07 61.6 78 43.6
Thecc.03G322800 Theobroma cacao HOM05D007551 ORTHO05D009424 1.5e-06 58.5 85 35.3
MBI13_g36729_MAGBIO Magnolia biondii HOM05D007551 ORTHO05D009424 9.5e-06 55.8 69 39.1


User provided reference genes

Program Settings