Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 1.7e-192 676.0 377 100.0
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 2.9e-181 638.6 377 90.5
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 1.4e-151 540.0 374 77.5
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 9.5e-148 527.3 374 76.7
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 5.6e-132 474.9 372 71.2
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 1.2e-110 404.1 383 60.8
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 3.3e-108 396.0 383 60.6
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 3.8e-104 382.5 374 58.3
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 5.5e-103 378.6 378 59.5
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 8.7e-101 371.3 386 55.2
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 1.7e-96 357.1 346 56.9
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 3.0e-93 346.3 368 56.0
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 8.7e-93 344.7 339 55.8
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 3.3e-92 342.8 368 55.7
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 3.3e-92 342.8 387 53.5
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 4.3e-92 342.4 386 53.6
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 4.3e-92 342.4 368 51.6
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 3.7e-91 339.3 390 53.1
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 5.3e-90 335.5 404 52.7
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 2.6e-89 333.2 389 51.4
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 5.9e-89 332.0 366 54.4
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 5.0e-88 328.9 375 52.8
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 1.2e-86 324.3 381 52.2
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.2e-86 324.3 383 52.0
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.1e-86 323.6 398 49.7
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 4.6e-86 322.4 410 48.8
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 6.1e-86 322.0 389 51.2
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.8e-85 320.5 375 53.3
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 1.8e-85 320.5 365 51.0
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 3.9e-85 319.3 385 50.9
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 3.9e-85 319.3 349 51.3
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 6.7e-85 318.5 386 51.6
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.9e-84 317.0 391 51.2
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 2.5e-84 316.6 386 50.8
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 4.3e-84 315.8 369 50.4
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 5.7e-84 315.5 393 50.6
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 4.8e-83 312.4 346 51.7
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.4e-82 310.8 397 50.4
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 2.4e-82 310.1 384 50.5
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 1.7e-80 303.9 418 45.9
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 3.8e-80 302.8 451 45.9
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 6.5e-80 302.0 372 54.0
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.5e-79 300.1 343 50.7
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.2e-78 297.7 343 50.7
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 1.6e-78 297.4 424 46.2
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 1.6e-78 297.4 346 50.6
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 7.9e-78 295.0 380 48.9
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 7.9e-78 295.0 340 50.3
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 1.8e-77 293.9 350 50.0
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 8.8e-77 291.6 343 50.4
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.1e-76 291.2 341 49.0
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 1.1e-76 291.2 352 50.6
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 1.5e-76 290.8 391 47.8
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 1.5e-76 290.8 394 47.5
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 3.3e-76 289.7 341 49.6
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 5.7e-76 288.9 370 48.6
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 7.4e-76 288.5 380 49.5
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 1.7e-75 287.3 337 50.4
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.2e-75 287.0 342 49.1
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 6.3e-75 285.4 362 48.3
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 6.3e-75 285.4 362 48.3
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 8.2e-75 285.0 372 48.4
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 1.4e-74 284.3 366 48.1
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 1.4e-74 284.3 338 49.7
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 3.1e-74 283.1 385 48.8
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 6.9e-74 282.0 364 47.8
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 5.9e-73 278.9 338 49.1
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 1.7e-72 277.3 371 47.7
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 2.9e-72 276.6 353 47.9
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 3.8e-72 276.2 425 44.5
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 1.1e-71 274.6 343 48.7
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 1.6e-70 270.8 364 47.0
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 2.1e-70 270.4 387 45.7
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 7.9e-70 268.5 343 46.6
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 5.2e-69 265.8 403 41.9
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 4.1e-66 256.1 303 51.8
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 1.6e-65 254.2 364 44.0
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 1.0e-64 251.5 424 43.6
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 3.8e-64 249.6 398 44.5
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 9.4e-63 245.0 310 48.4
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 1.2e-62 244.6 176 71.6
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 3.6e-62 243.0 332 46.1
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 1.8e-61 240.7 319 46.1
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 1.2e-60 238.0 335 45.7
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 1.5e-60 237.7 379 46.7
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 4.4e-60 236.1 376 43.1
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 2.2e-59 233.8 391 42.5
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 2.2e-59 233.8 355 42.8
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 2.8e-59 233.4 272 50.7
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 3.7e-59 233.0 335 47.8
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 8.2e-59 231.9 366 42.6
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 8.2e-59 231.9 297 50.2
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 1.8e-58 230.7 262 52.3
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 4.1e-58 229.6 380 46.3
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 5.3e-58 229.2 357 44.5
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 2.7e-57 226.9 327 43.4
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 3.2e-55 219.9 365 43.0
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 7.2e-55 218.8 316 45.6
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 7.2e-55 218.8 316 45.6
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 1.2e-54 218.0 364 41.8
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 1.6e-54 217.6 303 46.2
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 2.6e-52 210.3 380 40.8
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 2.1e-46 190.7 260 45.4
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 4.7e-46 189.5 303 46.5
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 2.3e-45 187.2 306 42.2
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 3.0e-45 186.8 396 37.4
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 5.2e-45 186.0 391 35.3
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 1.5e-44 184.5 322 41.6
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 1.5e-44 184.5 322 41.6
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 1.5e-44 184.5 322 41.6
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 3.4e-44 183.3 309 41.7
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 2.8e-43 180.3 306 42.5
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 2.8e-43 180.3 306 42.5
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.2e-41 174.9 384 38.3
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 2.3e-40 170.6 421 34.0
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 8.1e-22 109.0 337 29.1
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 9.2e-18 95.5 108 51.9
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 6.0e-17 92.8 363 24.8
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 3.0e-16 90.5 321 27.1
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 3.0e-16 90.5 343 25.7
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 1.1e-15 88.6 96 53.1
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 3.3e-15 87.0 223 30.9
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 9.5e-15 85.5 69 60.9
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 2.6e-12 77.4 86 51.2
SMO347G0210 Selaginella moellendorffii HOM05D005771 ORTHO05D007173 5.4e-10 69.7 270 25.9
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 9.2e-10 68.9 47 68.1
DCAR_000727 Daucus carota HOM05D005771 ORTHO05D045073 1.6e-06 58.2 62 62.9


User provided reference genes

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