Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001708g0020 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.1e-93 346.7 178 100.0
Nitab4.5_0007226g0010 Nicotiana tabacum HOM05D005569 ORTHO05D007052 1.6e-89 332.8 178 96.6
CAN.G1445.2 Capsicum annuum HOM05D005569 ORTHO05D007052 3.7e-86 321.6 178 92.1
PGSC0003DMG400001840 Solanum tuberosum HOM05D005569 ORTHO05D007052 4.1e-85 318.2 178 91.6
Sopen08g026060 Solanum pennellii HOM05D005569 ORTHO05D007052 8.6e-83 310.5 178 88.8
Solyc08g077470.4 Solanum lycopersicum HOM05D005569 ORTHO05D007052 1.7e-75 286.2 161 90.1
Nitab4.5_0002354g0080 Nicotiana tabacum HOM05D005569 ORTHO05D007052 4.3e-74 281.6 185 83.8
PGSC0003DMG400026509 Solanum tuberosum HOM05D005569 ORTHO05D007052 6.4e-70 267.7 182 78.6
Sopen06g022820 Solanum pennellii HOM05D005569 ORTHO05D007052 1.7e-67 259.6 182 75.8
Peaxi162Scf00084g00024 Petunia axillaris HOM05D005569 ORTHO05D007052 1.1e-64 250.4 178 77.5
CAN.G308.17 Capsicum annuum HOM05D005569 ORTHO05D007052 3.1e-64 248.8 177 74.6
Hma1.2p1_1111F.1_g258450 Hydrangea macrophylla HOM05D005569 ORTHO05D007052 4.0e-64 248.4 157 80.9
Actinidia00647 Actinidia chinensis HOM05D005569 ORTHO05D007052 8.4e-62 240.7 155 80.6
Nn8g41003 Nelumbo nucifera HOM05D005569 ORTHO05D007052 2.4e-61 239.2 163 76.1
TAR626G0082 Trochodendron aralioides HOM05D005569 ORTHO05D007052 3.2e-61 238.8 158 77.8
Prupe.3G023400 Prunus persica HOM05D005569 ORTHO05D007052 7.8e-60 234.2 156 78.8
HanXRQChr12g0359721 Helianthus annuus HOM05D005569 ORTHO05D007052 2.3e-59 232.6 158 75.3
Lj6P639T26 Lonicera japonica HOM05D005569 ORTHO05D007052 2.3e-59 232.6 152 79.6
Lsat_1_v5_gn_5_137201 Lactuca sativa HOM05D005569 ORTHO05D007052 3.9e-59 231.9 158 75.9
Nitab4.5_0003757g0060 Nicotiana tabacum HOM05D005569 ORTHO05D007052 3.9e-59 231.9 148 85.1
ClCG09G020780 Citrullus lanatus HOM05D005569 ORTHO05D007052 5.1e-59 231.5 151 80.1
CSS0046788 Camellia sinensis var. sinensis HOM05D005569 ORTHO05D007052 6.6e-59 231.1 158 75.3
Ciclev10032913m.g Citrus clementina HOM05D005569 ORTHO05D007052 1.1e-58 230.3 154 77.3
Lj3g0021821 Lotus japonicus HOM05D005569 ORTHO05D007052 1.5e-58 229.9 160 73.8
ECA234G1813 Erigeron canadensis HOM05D005569 ORTHO05D007052 1.9e-58 229.6 158 74.7
HanXRQChr10g0311221 Helianthus annuus HOM05D005569 ORTHO05D007052 1.9e-58 229.6 159 74.8
arahy.Tifrunner.gnm1.ann1.DT0EHL Arachis hypogaea HOM05D005569 ORTHO05D007052 3.3e-58 228.8 140 81.4
CsaV3_5G025600 Cucumis sativus L. HOM05D005569 ORTHO05D007052 3.3e-58 228.8 159 74.8
Eucgr.J00350 Eucalyptus grandis HOM05D005569 ORTHO05D007052 3.3e-58 228.8 140 82.1
MD17G1161700 Malus domestica HOM05D005569 ORTHO05D007052 3.3e-58 228.8 140 81.4
arahy.Tifrunner.gnm1.ann1.0XD544 Arachis hypogaea HOM05D005569 ORTHO05D007052 4.3e-58 228.4 140 81.4
FvH4_6g36900 Fragaria vesca HOM05D005569 ORTHO05D007052 4.3e-58 228.4 140 82.9
FAN14G0087 Fragaria x ananassa HOM05D000810 ORTHO05D003737 4.3e-58 228.4 140 82.9
GSVIVG01029554001 Vitis vinifera HOM05D005569 ORTHO05D007052 5.6e-58 228.0 151 78.1
FAN09G0120 Fragaria x ananassa HOM05D005569 ORTHO05D007052 9.6e-58 227.3 140 82.1
PSO170G0292 Papaver somniferum HOM05D005569 ORTHO05D007052 1.3e-57 226.9 168 69.0
MELO3C002923.2 Cucumis melo HOM05D005569 ORTHO05D007052 1.6e-57 226.5 152 77.6
Gohir.D05G115300 Gossypium hirsutum HOM05D005569 ORTHO05D007052 1.6e-57 226.5 159 75.5
Gorai.009G119400 Gossypium raimondii HOM05D005569 ORTHO05D007052 1.6e-57 226.5 159 75.5
Gohir.A05G114900 Gossypium hirsutum HOM05D005569 ORTHO05D007052 2.1e-57 226.1 159 75.5
PSO063G3520 Papaver somniferum HOM05D005569 ORTHO05D007052 2.8e-57 225.7 168 69.0
RcHm_v2.0_Chr2g0149331 Rosa chinensis HOM05D005569 ORTHO05D007052 4.8e-57 224.9 140 81.4
vmacro12582 Vaccinium macrocarpon HOM05D005569 ORTHO05D007052 6.2e-57 224.6 158 75.3
MD09G1166000 Malus domestica HOM05D005569 ORTHO05D007052 1.1e-56 223.8 140 79.3
Sed0017383 Sechium edule HOM05D005569 ORTHO05D007052 1.4e-56 223.4 145 78.6
Sc15g0001130 Simmondsia chinensis HOM05D005569 ORTHO05D007052 2.4e-56 222.6 158 70.9
Thecc.06G056000 Theobroma cacao HOM05D005569 ORTHO05D007052 3.1e-56 222.2 164 73.2
Cpa.g.sc176.7 Carica papaya HOM05D005569 ORTHO05D007052 4.0e-56 221.9 156 73.7
COL.COLO4_31145 Corchorus olitorius HOM05D000810 ORTHO05D003737 4.0e-56 221.9 167 67.7
Manes.06G179601 Manihot esculenta HOM05D005569 ORTHO05D007052 4.0e-56 221.9 156 74.4
Ca_20982_v3 Cicer arietinum L. HOM05D005569 ORTHO05D007052 6.9e-56 221.1 140 77.9
Aqoxy7G02714 Aquilegia oxysepala HOM05D005569 ORTHO05D007052 3.4e-55 218.8 158 70.9
AUR62025672 Chenopodium quinoa HOM05D005569 ORTHO05D007052 3.4e-55 218.8 159 69.2
TWI75G0478 Tripterygium wilfordii HOM05D005569 ORTHO05D007052 3.4e-55 218.8 160 71.9
Medtr4g005340 Medicago truncatula HOM05D005569 ORTHO05D007052 4.5e-55 218.4 159 68.6
Psat7g265160 Pisum sativum HOM05D005569 ORTHO05D007052 5.8e-55 218.0 162 70.4
HPP92_023863 Vanilla planifolia HOM05D005569 ORTHO05D007052 7.6e-55 217.6 156 69.9
CDE07G0675 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 1.7e-54 216.5 135 78.5
Potri.008G004200 Populus trichocarpa HOM05D005569 ORTHO05D007052 1.7e-54 216.5 137 81.8
QL05p088862 Quercus lobata HOM05D005569 ORTHO05D007052 1.7e-54 216.5 151 74.2
CDE04G0659 Ceratophyllum demersum HOM05D005569 ORTHO05D007052 2.2e-54 216.1 135 77.8
CiPaw.01G208600 Carya illinoinensis HOM05D005569 ORTHO05D007052 2.9e-54 215.7 143 75.5
TPR.G38774 Trifolium pratense HOM05D005569 ORTHO05D007052 2.9e-54 215.7 146 74.7
CiPaw.02G129100 Carya illinoinensis HOM05D005569 ORTHO05D007052 2.4e-53 212.6 145 77.9
Migut.D00888 Erythranthe guttata HOM05D005569 ORTHO05D007052 2.4e-53 212.6 153 71.9
FAN02G3798 Fragaria x ananassa HOM05D005569 ORTHO05D007052 3.2e-53 212.2 129 83.7
FAN05G2575 Fragaria x ananassa HOM05D005569 ORTHO05D007052 5.4e-53 211.5 169 68.0
Hund05672 Selenicereus undatus HOM05D005569 ORTHO05D007052 5.4e-53 211.5 136 74.3
VMungo0331G1663 Vigna mungo HOM05D005569 ORTHO05D007052 1.6e-52 209.9 139 74.8
SGA_v2.0_scaffold4G02105 Striga asiatica HOM05D005569 ORTHO05D007052 2.1e-52 209.5 153 70.6
Actinidia31124 Actinidia chinensis HOM05D005569 ORTHO05D007052 6.0e-52 208.0 146 76.7
Oeu049628.2 Olea europaea HOM05D005569 ORTHO05D007052 2.3e-51 206.1 125 80.8
Glyma.07G001900 Glycine max HOM05D005569 ORTHO05D007052 3.0e-51 205.7 140 74.3
MSTRG.4523 Avicennia marina HOM05D005569 ORTHO05D007052 3.9e-51 205.3 154 69.5
AL2G39310 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 6.7e-51 204.5 137 75.9
THA.LOC104808103 Tarenaya hassleriana HOM05D005569 ORTHO05D007052 1.1e-50 203.8 137 75.9
PGR031G1139 Punica granatum HOM05D005569 ORTHO05D007052 1.5e-50 203.4 168 64.9
AT1G78895 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 1.9e-50 203.0 137 75.2
MSTRG.9559 Avicennia marina HOM05D005569 ORTHO05D007052 1.9e-50 203.0 153 68.6
Lalb_Chr01g0011651 Lupinus albus HOM05D005569 ORTHO05D007052 2.5e-50 202.6 146 71.2
Sp5g33910 Schrenkiella parvula HOM05D005569 ORTHO05D007052 7.4e-50 201.1 137 73.7
Thhalv10019242m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 1.6e-49 199.9 139 71.9
BcaB02g07184 Brassica carinata HOM05D005569 ORTHO05D007052 2.1e-49 199.5 137 73.0
Sp1g14960 Schrenkiella parvula HOM05D005569 ORTHO05D007052 6.2e-49 198.0 137 75.2
BcaC07g41383 Brassica carinata HOM05D005569 ORTHO05D007052 1.4e-48 196.8 137 73.7
Carub.0002s2572 Capsella rubella HOM05D005569 ORTHO05D007052 1.4e-48 196.8 137 73.7
Aa31LG4G2110 Aethionema arabicum HOM05D005569 ORTHO05D007052 1.8e-48 196.4 137 74.5
CARHR072480 Cardamine hirsuta HOM05D005569 ORTHO05D007052 2.4e-48 196.1 148 68.9
EL10Ac7g18137 Beta vulgaris HOM05D005569 ORTHO05D007052 4.0e-48 195.3 123 76.4
BraA09t41445Z Brassica rapa HOM05D005569 ORTHO05D007052 9.0e-48 194.1 140 72.9
Carub.0001s1656 Capsella rubella HOM05D005569 ORTHO05D007052 2.6e-47 192.6 135 74.1
SEGI_33936 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 4.5e-47 191.8 154 64.3
BcaC07g41456 Brassica carinata HOM05D005569 ORTHO05D007052 5.8e-47 191.4 140 72.1
BolC8t51973H Brassica oleracea HOM05D005569 ORTHO05D007052 5.8e-47 191.4 140 72.1
Zm00001eb414080 Zea mays HOM05D005569 ORTHO05D007052 5.8e-47 191.4 131 71.8
Hund18590 Selenicereus undatus HOM05D005569 ORTHO05D007052 9.9e-47 190.7 150 66.0
A07p27440 Brassica napus HOM05D005569 ORTHO05D007052 1.3e-46 190.3 132 74.2
BraA07t30385Z Brassica rapa HOM05D005569 ORTHO05D007052 1.3e-46 190.3 132 74.2
AL1G28990 Arabidopsis lyrata HOM05D005569 ORTHO05D007052 1.7e-46 189.9 135 73.3
AT1G16825 Arabidopsis thaliana HOM05D005569 ORTHO05D007052 3.8e-46 188.7 132 75.0
BcaC08g45404 Brassica carinata HOM05D005569 ORTHO05D007052 4.9e-46 188.3 138 71.0
C06p30360 Brassica napus HOM05D005569 ORTHO05D007052 4.9e-46 188.3 138 71.0
CARHR017290 Cardamine hirsuta HOM05D005569 ORTHO05D007052 8.4e-46 187.6 139 70.5
BolC6t38199H Brassica oleracea HOM05D005569 ORTHO05D007052 1.1e-45 187.2 132 72.7
SalBow4G0561 Salvia bowleyana HOM05D005569 ORTHO05D007052 1.3e-43 180.3 159 61.0
A09p60680 Brassica napus HOM05D005569 ORTHO05D007052 1.5e-42 176.8 126 74.6
Phvul.010G164400 Phaseolus vulgaris HOM05D005569 ORTHO05D007052 1.5e-42 176.8 130 67.7
MBI16_g18210_MAGBIO Magnolia biondii HOM05D005569 ORTHO05D007052 5.6e-42 174.9 105 81.9
DCAR_028944 Daucus carota HOM05D005569 ORTHO05D007052 7.4e-42 174.5 112 79.5
C08p44280 Brassica napus HOM05D005569 ORTHO05D007052 9.6e-42 174.1 126 73.8
AUR62001332 Chenopodium quinoa HOM05D005569 ORTHO05D007052 2.8e-41 172.6 105 82.9
CANSAT01G2461 Cannabis sativa HOM05D005569 ORTHO05D007052 4.0e-40 168.7 101 81.2
SEGI_27689 Sequoiadendron giganteum HOM05D005569 ORTHO05D007052 4.0e-40 168.7 120 68.3
Haze_16187 Corylus avellana HOM05D005569 ORTHO05D007052 6.9e-40 167.9 99 84.8
Cc04_g00060 Coffea canephora HOM05D005569 ORTHO05D007052 5.5e-37 158.3 110 73.6
Os08g0225100 Oryza sativa ssp. japonica HOM05D005569 ORTHO05D007052 7.1e-37 157.9 106 74.5
SMO215G0002 Selaginella moellendorffii HOM05D005569 ORTHO05D007052 6.0e-36 154.8 118 65.3
Sabra08G0001800 Salix brachista HOM05D005569 ORTHO05D007052 1.3e-35 153.7 101 80.2
Mapoly0045s0143 Marchantia polymorpha HOM05D005569 ORTHO05D007052 3.0e-35 152.5 123 56.9
Thhalv10009539m.g Eutrema salsugineum HOM05D005569 ORTHO05D007052 2.8e-33 146.0 99 74.7
Pp3c8_16360 Physcomitrium patens HOM05D005569 ORTHO05D007052 3.7e-33 145.6 121 59.5
ATR0626G016 Amborella trichopoda HOM05D005569 ORTHO05D007052 2.9e-30 136.0 110 64.5
Duzib192G1047 Durio zibethinus HOM05D005569 ORTHO05D007052 4.6e-28 128.6 83 75.9
Atru.chr1.2818 Acer truncatum HOM05D005569 ORTHO05D007052 3.9e-27 125.6 77 81.8
Prupe.3G058300 Prunus persica HOM05D005569 ORTHO05D007052 6.9e-24 114.8 74 79.7
Pp3c24_12140 Physcomitrium patens HOM05D005569 ORTHO05D007052 1.8e-19 100.1 132 48.5
CBR_g49429 Chara braunii HOM05D005569 ORTHO05D007052 2.3e-19 99.8 129 42.6
CBR_g40779 Chara braunii HOM05D005569 ORTHO05D007052 3.0e-19 99.4 129 45.7
BcaC07g41384 Brassica carinata HOM05D005569 ORTHO05D007052 8.2e-17 91.3 95 52.6
Duzib235G0081 Durio zibethinus HOM05D005569 ORTHO05D007052 1.1e-16 90.9 140 46.4
CBR_g41646 Chara braunii HOM05D000785 ORTHO05D000231 1.4e-16 90.5 125 40.8
unitig_899.g14763 Utricularia gibba HOM05D000070 ORTHO05D003301 7.7e-15 84.7 74 58.1
HPP92_023858 Vanilla planifolia HOM05D005569 ORTHO05D007052 7.7e-15 84.7 51 76.5
SEGI_34083 Sequoiadendron giganteum HOM05D000074 ORTHO05D000220 5.7e-10 68.6 47 70.2
C08p44240 Brassica napus HOM05D005569 ORTHO05D007052 7.0e-08 61.6 48 62.5
BolC8t51970H Brassica oleracea HOM05D005569 ORTHO05D007052 7.0e-08 61.6 48 62.5
Prupe.5G038700 Prunus persica HOM05D005569 ORTHO05D007052 2.9e-06 56.2 39 69.2


User provided reference genes

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