Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 8.6e-134 480.3 243 100.0
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 8.7e-102 374.0 244 81.1
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 5.6e-101 371.3 243 78.6
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 2.1e-100 369.4 243 78.2
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 8.1e-100 367.5 243 77.4
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 1.6e-95 353.2 243 74.1
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 1.0e-94 350.5 243 73.3
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 8.7e-94 347.4 239 74.1
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 1.9e-93 346.3 243 72.0
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 1.3e-92 343.6 238 72.3
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 2.1e-92 342.8 243 71.2
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 2.8e-92 342.4 243 70.8
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 2.8e-92 342.4 240 70.8
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 3.6e-92 342.0 178 92.7
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 6.2e-92 341.3 240 71.2
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 8.1e-92 340.9 240 70.0
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 1.4e-91 340.1 241 71.4
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 4.0e-91 338.6 240 69.2
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 6.9e-91 337.8 241 71.4
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 6.9e-91 337.8 240 71.7
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 1.2e-90 337.0 241 70.5
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 2.6e-90 335.9 241 70.5
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 2.6e-90 335.9 241 70.5
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 5.8e-90 334.7 238 71.8
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 1.7e-89 333.2 240 70.8
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 2.9e-89 332.4 242 70.7
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 3.8e-89 332.0 244 70.9
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 4.9e-89 331.6 245 68.2
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 6.4e-89 331.3 238 71.4
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 8.4e-89 330.9 241 69.3
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 1.1e-88 330.5 244 71.3
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 1.4e-88 330.1 240 71.2
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 1.9e-88 329.7 240 70.0
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 2.4e-88 329.3 241 67.6
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 4.2e-88 328.6 241 68.9
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 4.2e-88 328.6 240 70.0
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 9.3e-88 327.4 240 68.8
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 9.3e-88 327.4 239 69.9
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.1e-87 326.2 240 71.2
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 2.7e-87 325.9 242 70.2
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 3.5e-87 325.5 240 69.6
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 3.5e-87 325.5 239 69.5
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 6.0e-87 324.7 245 68.2
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 1.0e-86 323.9 242 66.9
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 1.8e-86 323.2 240 67.1
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 2.3e-86 322.8 235 70.6
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 3.9e-86 322.0 240 67.5
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.1e-85 320.5 209 74.6
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 2.5e-85 319.3 238 68.1
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 2.5e-85 319.3 238 66.8
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 2.5e-85 319.3 238 66.8
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 2.5e-85 319.3 239 67.8
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 2.5e-85 319.3 240 67.1
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 4.3e-85 318.5 243 67.5
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 7.4e-85 317.8 244 66.8
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 7.4e-85 317.8 242 67.8
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 9.6e-85 317.4 238 67.2
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 9.6e-85 317.4 232 72.0
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 1.6e-84 316.6 238 66.8
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 2.1e-84 316.2 242 66.5
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 3.7e-84 315.5 240 65.8
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 6.2e-84 314.7 244 66.4
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 6.2e-84 314.7 308 56.5
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 1.1e-83 313.9 243 66.3
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 1.1e-83 313.9 241 68.0
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 3.1e-83 312.4 238 65.5
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.1e-83 312.4 244 64.8
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 3.1e-83 312.4 305 58.7
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 9.0e-83 310.8 278 60.1
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 1.2e-82 310.5 235 66.0
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 1.2e-82 310.5 286 58.7
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 4.5e-82 308.5 242 64.0
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 5.8e-82 308.1 238 66.0
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 9.9e-82 307.4 251 62.5
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 9.9e-82 307.4 242 69.4
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 3.8e-81 305.4 177 80.2
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 6.4e-81 304.7 238 66.4
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 1.9e-80 303.1 238 65.5
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 1.9e-80 303.1 217 70.0
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 9.3e-80 300.8 251 61.4
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 2.1e-79 299.7 237 67.1
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 3.5e-79 298.9 238 66.0
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 6.0e-79 298.1 269 59.1
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 3.9e-78 295.4 235 62.6
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 5.1e-78 295.0 242 62.8
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 1.9e-77 293.1 206 68.4
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 1.4e-72 276.9 212 66.0
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 3.2e-72 275.8 243 61.7
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 1.3e-70 270.4 163 77.3
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 1.1e-69 267.3 238 56.3
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 1.1e-69 267.3 238 58.4
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 7.4e-69 264.6 243 56.8
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 6.3e-68 261.5 255 56.1
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 9.0e-67 257.7 182 67.0
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.2e-66 257.3 203 65.5
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 1.5e-66 256.9 210 59.5
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 1.7e-65 253.4 195 69.2
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 1.4e-64 250.4 239 56.1
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 1.0e-62 244.2 394 40.9
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 3.1e-59 232.6 184 59.8
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 4.1e-59 232.3 242 52.5
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 9.7e-53 211.1 169 68.0
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 8.5e-49 198.0 240 45.4
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 8.8e-46 188.0 185 58.4
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.7e-44 183.7 165 63.6
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 2.1e-39 166.8 138 65.9
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 2.1e-39 166.8 138 65.9
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 7.5e-37 158.3 164 53.7
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 2.4e-35 153.3 165 47.3
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 3.8e-33 146.0 143 56.6
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 2.5e-32 143.3 232 34.9
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 4.2e-32 142.5 196 46.4
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 4.7e-31 139.0 149 53.7
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 4.7e-23 112.5 141 46.1
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 8.0e-23 111.7 82 68.3
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 8.3e-20 101.7 116 53.4
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 1.2e-18 97.8 54 75.9
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 3.3e-16 89.7 113 47.8
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 1.0e-14 84.7 112 47.3
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 1.5e-13 80.9 111 45.9
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.4e-11 74.3 104 44.2
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 2.7e-10 70.1 48 64.6


User provided reference genes

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