Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001706g0070 Nicotiana tabacum HOM05D004971 ORTHO05D006289 6.2e-94 347.4 173 100.0
Nitab4.5_0000066g0130 Nicotiana tabacum HOM05D004971 ORTHO05D006289 2.1e-33 146.4 103 69.9
Nitab4.5_0003331g0010 Nicotiana tabacum HOM05D004971 ORTHO05D006289 4.7e-33 145.2 103 68.9
Solyc05g050000.3 Solanum lycopersicum HOM05D004971 ORTHO05D006289 4.0e-24 115.5 103 56.3
Sopen05g028390 Solanum pennellii HOM05D004971 ORTHO05D006289 5.2e-24 115.2 103 56.3
Nitab4.5_0002165g0080 Nicotiana tabacum HOM05D004971 ORTHO05D006289 6.7e-24 114.8 75 73.3
PGSC0003DMG400021659 Solanum tuberosum HOM05D004971 ORTHO05D006289 1.1e-23 114.0 103 55.3
CAN.G399.3 Capsicum annuum HOM05D004971 ORTHO05D006289 3.1e-21 105.9 103 54.4
Rhsim03G0239000 Rhododendron simsii HOM05D004971 ORTHO05D006289 5.0e-19 98.6 103 50.5
CSS0031404 Camellia sinensis var. sinensis HOM05D004971 ORTHO05D006289 1.6e-17 93.6 87 54.0
SGA_v2.0_scaffold20G09148 Striga asiatica HOM05D004971 ORTHO05D006289 4.7e-17 92.0 99 46.5
Dinv41645 Davidia involucrata HOM05D004971 ORTHO05D006289 8.0e-17 91.3 97 50.5
SGA_v2.0_scaffold22G09903 Striga asiatica HOM05D004971 ORTHO05D006289 1.0e-16 90.9 99 46.5
vmacro06238 Vaccinium macrocarpon HOM05D004971 ORTHO05D006289 1.0e-16 90.9 103 47.6
MSTRG.19566 Avicennia marina HOM05D004971 ORTHO05D006289 1.8e-16 90.1 104 46.2
Lj7A659G31 Lonicera japonica HOM05D004971 ORTHO05D006289 5.2e-16 88.6 110 42.7
Oeu017816.1 Olea europaea HOM05D004971 ORTHO05D006289 2.6e-15 86.3 91 48.4
Actinidia32663 Actinidia chinensis HOM05D004971 ORTHO05D006289 3.4e-15 85.9 85 54.1
Peaxi162Scf00539g00614 Petunia axillaris HOM05D004971 ORTHO05D006289 7.5e-15 84.7 103 45.6
Migut.J01131 Erythranthe guttata HOM05D004971 ORTHO05D006289 1.7e-14 83.6 86 52.3
Phvul.002G310900 Phaseolus vulgaris HOM05D004971 ORTHO05D006289 1.7e-14 83.6 65 56.9
DCAR_028679 Daucus carota HOM05D004971 ORTHO05D006289 2.2e-14 83.2 90 50.0
Lsat_1_v5_gn_7_41360 Lactuca sativa HOM05D004971 ORTHO05D006289 2.2e-14 83.2 80 51.2
Sabra18G0073100 Salix brachista HOM05D004971 ORTHO05D006289 2.2e-14 83.2 103 42.7
Lalb_Chr05g0223101 Lupinus albus HOM05D004971 ORTHO05D006289 2.8e-14 82.8 72 56.9
AUR62021639 Chenopodium quinoa HOM05D004971 ORTHO05D006289 4.8e-14 82.0 98 49.0
Cc06_g10130 Coffea canephora HOM05D004971 ORTHO05D006289 4.8e-14 82.0 77 51.9
Glyma.08G035500 Glycine max HOM05D004971 ORTHO05D006289 4.8e-14 82.0 107 43.0
THA.LOC104811095 Tarenaya hassleriana HOM05D004971 ORTHO05D006289 4.8e-14 82.0 72 52.8
MELO3C024707.2 Cucumis melo HOM05D004971 ORTHO05D006289 6.3e-14 81.6 61 54.1
HanXRQChr09g0239411 Helianthus annuus HOM05D004971 ORTHO05D006289 8.3e-14 81.3 113 41.6
Oeu000366.2 Olea europaea HOM05D004971 ORTHO05D006289 8.3e-14 81.3 62 62.9
GSVIVG01015340001 Vitis vinifera HOM05D004971 ORTHO05D006289 8.3e-14 81.3 98 43.9
CsaV3_1G020790 Cucumis sativus L. HOM05D004971 ORTHO05D006289 1.1e-13 80.9 112 37.5
AL8G25390 Arabidopsis lyrata HOM05D004971 ORTHO05D006289 1.4e-13 80.5 119 37.8
ClCG06G008900 Citrullus lanatus HOM05D004971 ORTHO05D006289 1.4e-13 80.5 61 54.1
Lj4g0001585 Lotus japonicus HOM05D004971 ORTHO05D006289 1.4e-13 80.5 87 47.1
Cfa003218 Carpinus fangiana HOM05D001382 ORTHO05D001266 1.8e-13 80.1 97 45.4
ECA240G1764 Erigeron canadensis HOM05D004971 ORTHO05D006289 1.8e-13 80.1 111 39.6
VMungo0251G3379 Vigna mungo HOM05D004971 ORTHO05D006289 1.8e-13 80.1 92 48.9
AUR62008451 Chenopodium quinoa HOM05D004971 ORTHO05D006289 2.4e-13 79.7 98 45.9
TAR626G1908 Trochodendron aralioides HOM05D001382 ORTHO05D006289 2.4e-13 79.7 94 45.7
TAR636G2606 Trochodendron aralioides HOM05D004971 ORTHO05D006289 2.4e-13 79.7 94 45.7
CANSAT56G1645 Cannabis sativa HOM05D004971 ORTHO05D006289 3.1e-13 79.3 103 40.8
CANSAT56G2306 Cannabis sativa HOM05D004971 ORTHO05D006289 3.1e-13 79.3 103 40.8
TPR.G23453 Trifolium pratense HOM05D004971 ORTHO05D006289 3.1e-13 79.3 98 42.9
unitig_748.g8739 Utricularia gibba HOM05D004971 ORTHO05D006289 3.1e-13 79.3 61 57.4
Haze_02526 Corylus avellana HOM05D004971 ORTHO05D006289 4.1e-13 79.0 97 45.4
PGR102G0147 Punica granatum HOM05D004971 ORTHO05D006289 4.1e-13 79.0 99 44.4
Manes.16G112100 Manihot esculenta HOM05D004971 ORTHO05D006289 5.4e-13 78.6 105 42.9
RcHm_v2.0_Chr2g0091361 Rosa chinensis HOM05D004971 ORTHO05D006289 5.4e-13 78.6 98 41.8
Medtr8g102950 Medicago truncatula HOM05D004971 ORTHO05D006289 7.0e-13 78.2 97 43.3
arahy.Tifrunner.gnm1.ann1.050WC1 Arachis hypogaea HOM05D004971 ORTHO05D006289 9.1e-13 77.8 65 53.8
Duzib150G1337 Durio zibethinus HOM05D004971 ORTHO05D006289 9.1e-13 77.8 108 41.7
Psat7g014440 Pisum sativum HOM05D004971 ORTHO05D006289 9.1e-13 77.8 103 43.7
FAN19G1252 Fragaria x ananassa HOM05D001382 ORTHO05D001266 1.2e-12 77.4 103 38.8
arahy.Tifrunner.gnm1.ann1.R8N6MQ Arachis hypogaea HOM05D004971 ORTHO05D006289 2.0e-12 76.6 65 52.3
HanXRQChr03g0061421 Helianthus annuus HOM05D004971 ORTHO05D006289 2.0e-12 76.6 103 41.7
Lalb_Chr14g0371731 Lupinus albus HOM05D004971 ORTHO05D006289 2.0e-12 76.6 62 53.2
Prupe.7G224700 Prunus persica HOM05D004971 ORTHO05D006289 2.0e-12 76.6 95 41.1
AT5G51130 Arabidopsis thaliana HOM05D004971 ORTHO05D006289 2.7e-12 76.3 111 38.7
COL.COLO4_34800 Corchorus olitorius HOM05D004971 ORTHO05D006289 2.7e-12 76.3 110 40.0
FvH4_1g05710 Fragaria vesca HOM05D004971 ORTHO05D006289 2.7e-12 76.3 103 37.9
Sed0000382 Sechium edule HOM05D004971 ORTHO05D006289 2.7e-12 76.3 61 54.1
Atru.chr7.1418 Acer truncatum HOM05D004971 ORTHO05D006289 3.5e-12 75.9 61 59.0
Haze_02523 Corylus avellana HOM05D004971 ORTHO05D006289 3.5e-12 75.9 97 45.4
Eucgr.C03795 Eucalyptus grandis HOM05D004971 ORTHO05D006289 3.5e-12 75.9 104 38.5
Potri.018G084700 Populus trichocarpa HOM05D004971 ORTHO05D006289 3.5e-12 75.9 80 45.0
Aa31LG3G7640 Aethionema arabicum HOM05D004971 ORTHO05D006289 4.5e-12 75.5 112 36.6
CARHR256940 Cardamine hirsuta HOM05D004971 ORTHO05D006289 4.5e-12 75.5 61 54.1
FAN26G3039 Fragaria x ananassa HOM05D001382 ORTHO05D001266 4.5e-12 75.5 103 38.8
BcaC01g06098 Brassica carinata HOM05D004971 ORTHO05D006289 5.9e-12 75.1 74 51.4
BolC3t14306H Brassica oleracea HOM05D004971 ORTHO05D006289 5.9e-12 75.1 74 51.4
Ca_17315_v3 Cicer arietinum L. HOM05D004971 ORTHO05D006289 5.9e-12 75.1 61 54.1
Carub.0008s1117 Capsella rubella HOM05D004971 ORTHO05D006289 7.7e-12 74.7 120 36.7
Gohir.A07G004400 Gossypium hirsutum HOM05D004971 ORTHO05D006289 7.7e-12 74.7 112 37.5
Gohir.D07G007800 Gossypium hirsutum HOM05D004971 ORTHO05D006289 7.7e-12 74.7 114 39.5
Gorai.001G007500 Gossypium raimondii HOM05D004971 ORTHO05D006289 7.7e-12 74.7 114 39.5
Hund26242 Selenicereus undatus HOM05D004971 ORTHO05D006289 7.7e-12 74.7 78 50.0
Sc08g0007770 Simmondsia chinensis HOM05D004971 ORTHO05D006289 7.7e-12 74.7 63 57.1
BcaB05g24018 Brassica carinata HOM05D004971 ORTHO05D006289 1.0e-11 74.3 112 33.9
C03p19180 Brassica napus HOM05D004971 ORTHO05D006289 1.0e-11 74.3 72 51.4
CiPaw.03G227700 Carya illinoinensis HOM05D004971 ORTHO05D006289 1.0e-11 74.3 93 45.2
MD15G1192600 Malus domestica HOM05D004971 ORTHO05D006289 1.0e-11 74.3 61 52.5
A02p12480 Brassica napus HOM05D004971 ORTHO05D006289 1.3e-11 73.9 72 47.2
BraA02t06311Z Brassica rapa HOM05D004971 ORTHO05D006289 1.3e-11 73.9 72 47.2
Thhalv10014188m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 1.3e-11 73.9 61 54.1
BcaC03g14623 Brassica carinata HOM05D004971 ORTHO05D006289 1.7e-11 73.6 72 47.2
BolC2t08195H Brassica oleracea HOM05D004971 ORTHO05D006289 1.7e-11 73.6 72 47.2
FAN23G0317 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.7e-11 73.6 103 36.9
FAN28G1806 Fragaria x ananassa HOM05D001382 ORTHO05D006289 1.7e-11 73.6 103 37.9
Os08g0540500 Oryza sativa ssp. japonica HOM05D004971 ORTHO05D006289 3.8e-11 72.4 116 37.1
TWI12G1172 Tripterygium wilfordii HOM05D004971 ORTHO05D006289 5.0e-11 72.0 89 43.8
SHI02711 Sapria himalayana HOM05D004971 ORTHO05D006289 6.5e-11 71.6 103 38.8
Thecc.09G104800 Theobroma cacao HOM05D004971 ORTHO05D006289 6.5e-11 71.6 93 41.9
Nn3g18146 Nelumbo nucifera HOM05D004971 ORTHO05D006289 8.5e-11 71.2 98 40.8
Sp6g13340 Schrenkiella parvula HOM05D004971 ORTHO05D006289 8.5e-11 71.2 102 39.2
CDE11G0552 Ceratophyllum demersum HOM05D004971 ORTHO05D006289 1.1e-10 70.9 88 44.3
BraA03t10920Z Brassica rapa HOM05D004971 ORTHO05D006289 1.5e-10 70.5 77 45.5
PSO541G6366 Papaver somniferum HOM05D004971 ORTHO05D006289 1.5e-10 70.5 106 37.7
HPP92_012900 Vanilla planifolia HOM05D004971 ORTHO05D006289 1.5e-10 70.5 91 42.9
C02p20580 Brassica napus HOM05D004971 ORTHO05D006289 1.9e-10 70.1 72 45.8
HPP92_012921 Vanilla planifolia HOM05D004971 ORTHO05D006289 4.2e-10 68.9 55 58.2
AagrBONN_evm.TU.Sc2ySwM_117.3390 Anthoceros agrestis HOM05D004971 ORTHO05D006289 7.2e-10 68.2 61 49.2
A03p16290 Brassica napus HOM05D004971 ORTHO05D006289 7.2e-10 68.2 74 47.3
QL01p004043 Quercus lobata HOM05D004971 ORTHO05D006289 7.2e-10 68.2 88 44.3
Aqoxy7G01513 Aquilegia oxysepala HOM05D004971 ORTHO05D006289 9.4e-10 67.8 66 47.0
Mapoly0002s0233 Marchantia polymorpha HOM05D004971 ORTHO05D006289 9.4e-10 67.8 55 54.5
Zm00001eb198370 Zea mays HOM05D004971 ORTHO05D006289 9.4e-10 67.8 64 45.3
Ciclev10009268m.g Citrus clementina HOM05D004971 ORTHO05D006289 1.2e-09 67.4 43 69.8
PSO675G4950 Papaver somniferum HOM05D004971 ORTHO05D006289 1.6e-09 67.0 57 52.6
Thhalv10027350m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 2.7e-09 66.2 48 58.3
CBR_g687 Chara braunii HOM05D004971 ORTHO05D006289 3.6e-09 65.9 73 45.2
BcaC01g06076 Brassica carinata HOM05D004971 ORTHO05D006289 8.0e-09 64.7 62 48.4
Lalb_Chr24g0397371 Lupinus albus HOM05D004971 ORTHO05D006289 8.0e-09 64.7 98 38.8
SEGI_33858 Sequoiadendron giganteum HOM05D004971 ORTHO05D006289 8.0e-09 64.7 78 44.9
Thhalv10026861m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 3.0e-08 62.8 83 37.3
Thhalv10027410m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 3.0e-08 62.8 83 37.3
Lalb_Chr24g0397391 Lupinus albus HOM05D004971 ORTHO05D006289 6.8e-08 61.6 65 40.0
Thhalv10006518m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 8.8e-08 61.2 97 38.1
Thhalv10027230m.g Eutrema salsugineum HOM05D004971 ORTHO05D006289 8.8e-08 61.2 97 38.1
Actinidia07401 Actinidia chinensis HOM05D004971 ORTHO05D006289 1.5e-07 60.5 46 58.7
arahy.Tifrunner.gnm1.ann1.D57MTL Arachis hypogaea HOM05D004971 ORTHO05D006289 5.7e-07 58.5 54 50.0
Cre15.g636450 Chlamydomonas reinhardtii HOM05D004971 ORTHO05D006289 7.5e-07 58.2 65 43.1
SMO241G0030 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 1.3e-06 57.4 81 32.1
arahy.Tifrunner.gnm1.ann1.2J0XRF Arachis hypogaea HOM05D004971 ORTHO05D006289 1.7e-06 57.0 54 48.1
SMO232G0003 Selaginella moellendorffii HOM05D004971 ORTHO05D006289 1.7e-06 57.0 62 38.7


User provided reference genes

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