Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 5.1e-80 301.6 229 100.0
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 1.1e-74 283.9 229 73.8
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 2.5e-58 229.6 233 58.8
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 4.4e-55 218.8 233 57.5
CAN.G333.1 Capsicum annuum HOM05D006684 ORTHO05D008443 2.0e-47 193.4 234 67.5
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 8.0e-41 171.4 237 44.7
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 3.7e-38 162.5 240 54.6
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 6.4e-38 161.8 230 45.2
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 1.4e-37 160.6 243 44.4
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 1.9e-37 160.2 246 46.3
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 4.1e-37 159.1 226 47.8
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 1.2e-36 157.5 243 47.3
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 1.2e-36 157.5 226 48.2
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.2e-36 157.5 226 48.2
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.2e-36 157.5 226 48.2
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 2.0e-36 156.8 235 60.4
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 3.9e-35 152.5 230 46.1
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 3.9e-35 152.5 234 41.9
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 3.9e-35 152.5 226 48.7
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 3.9e-35 152.5 227 47.1
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 1.9e-34 150.2 251 49.0
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 2.5e-34 149.8 233 50.6
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 4.3e-34 149.1 226 46.5
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 5.6e-34 148.7 232 41.4
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 5.6e-34 148.7 226 54.9
Solyc05g048750.3 Solanum lycopersicum HOM05D006684 ORTHO05D008443 5.6e-34 148.7 191 50.3
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 9.5e-34 147.9 228 50.0
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 9.5e-34 147.9 238 41.6
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 1.2e-33 147.5 226 43.4
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 1.2e-33 147.5 240 45.8
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 2.8e-33 146.4 246 41.5
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 4.7e-33 145.6 237 46.4
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 8.0e-33 144.8 225 48.0
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 1.1e-32 144.4 226 47.8
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 3.1e-32 142.9 226 47.3
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 5.2e-32 142.1 232 50.0
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 6.8e-32 141.7 232 46.6
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 6.8e-32 141.7 239 43.9
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 1.2e-31 141.0 227 45.4
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 1.5e-31 140.6 233 54.5
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 2.6e-31 139.8 221 43.9
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 2.6e-31 139.8 231 51.1
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 2.9e-30 136.3 243 39.1
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 4.9e-30 135.6 238 39.5
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 8.3e-30 134.8 231 39.8
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 1.4e-29 134.0 240 38.8
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 2.4e-29 133.3 234 44.4
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 4.1e-29 132.5 236 42.4
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 4.1e-29 132.5 224 50.4
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 7.1e-29 131.7 237 40.1
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 7.1e-29 131.7 229 41.5
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 7.1e-29 131.7 235 48.5
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 9.2e-29 131.3 244 45.9
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 1.6e-28 130.6 231 47.2
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 3.5e-28 129.4 227 38.8
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 3.5e-28 129.4 244 45.1
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 4.6e-28 129.0 238 43.7
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 7.8e-28 128.3 226 47.8
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 3.9e-27 125.9 220 44.5
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 5.1e-27 125.6 225 40.0
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 6.6e-27 125.2 231 47.6
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 1.9e-26 123.6 223 41.7
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 3.3e-26 122.9 226 37.2
Manes.12G048301 Manihot esculenta HOM05D006684 ORTHO05D008443 5.6e-26 122.1 220 58.6
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 9.5e-26 121.3 284 33.8
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 2.1e-25 120.2 237 38.8
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 4.7e-25 119.0 226 37.2
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 1.1e-24 117.9 236 35.2
Manes.12G053501 Manihot esculenta HOM05D006684 ORTHO05D008443 1.8e-24 117.1 220 57.7
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 3.1e-24 116.3 234 38.9
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 5.2e-24 115.5 239 45.2
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 8.9e-24 114.8 234 38.0
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 1.2e-23 114.4 232 45.7
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 2.0e-23 113.6 223 44.4
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 2.6e-23 113.2 224 42.9
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 1.7e-22 110.5 229 37.6
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 2.2e-22 110.2 215 39.1
TWI23G1019 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 2.9e-22 109.8 75 72.0
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 4.9e-22 109.0 228 37.7
Duzib138G0092 Durio zibethinus HOM05D006684 ORTHO05D008443 1.1e-21 107.8 79 73.4
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 1.1e-21 107.8 229 38.0
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 1.9e-21 107.1 232 35.3
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 1.9e-21 107.1 223 46.2
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 3.2e-21 106.3 72 72.2
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 7.1e-21 105.1 232 35.3
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 9.2e-21 104.8 232 39.2
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 3.5e-20 102.8 81 61.7
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 7.8e-20 101.7 223 42.6
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 7.8e-20 101.7 242 33.5
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 7.8e-20 101.7 84 65.5
vmacro20995 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 3.0e-19 99.8 80 65.0
unitig_578.g16483 Utricularia gibba HOM05D006684 ORTHO05D008443 3.9e-19 99.4 72 62.5
Oeu036610.1 Olea europaea HOM05D006684 ORTHO05D008443 6.6e-19 98.6 81 64.2
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 2.5e-18 96.7 76 64.5
Ca_07836_v3 Cicer arietinum L. HOM05D006684 ORTHO05D008443 3.3e-18 96.3 71 63.4
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 9.6e-18 94.7 352 31.5
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 2.1e-17 93.6 228 36.0
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 2.8e-17 93.2 232 33.2
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 3.6e-17 92.8 223 35.0
Psat3g104080 Pisum sativum HOM05D006684 ORTHO05D008443 3.6e-17 92.8 71 62.0
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 2.4e-16 90.1 83 59.0
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 2.4e-16 90.1 80 60.0
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 3.1e-16 89.7 250 35.6
Actinidia33456 Actinidia chinensis HOM05D006684 ORTHO05D008443 2.6e-15 86.7 78 62.8
Duzib138G0657 Durio zibethinus HOM05D006684 ORTHO05D008443 3.4e-15 86.3 106 49.1
PSO782G3084 Papaver somniferum HOM05D006684 ORTHO05D008443 9.9e-15 84.7 86 57.0
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 1.7e-14 84.0 248 34.7
Zm00001eb269540 Zea mays HOM05D006684 ORTHO05D008443 7.1e-13 78.6 74 58.1
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 1.2e-12 77.8 222 33.3
Ah.07g198740 Amaranthus hybridus HOM05D006684 ORTHO05D008443 2.1e-12 77.0 191 35.1
Haze_16738 Corylus avellana HOM05D006684 ORTHO05D008443 3.0e-11 73.2 66 57.6
Pp3c22_10350 Physcomitrium patens HOM05D006684 ORTHO05D008443 3.0e-11 73.2 230 28.7
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 8.7e-11 71.6 77 53.2
MBI12_g38018_MAGBIO Magnolia biondii HOM05D006684 ORTHO05D008443 1.5e-10 70.9 82 50.0
SMO347G0023 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 9.0e-08 61.6 218 28.4
HPP92_020257 Vanilla planifolia HOM05D006684 ORTHO05D008443 1.5e-07 60.8 49 59.2
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 5.8e-07 58.9 229 29.3
AagrBONN_evm.TU.Sc2ySwM_344.4110 Anthoceros agrestis HOM05D006684 ORTHO05D008443 1.3e-06 57.8 245 26.9


User provided reference genes

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