Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001699g0070 Nicotiana tabacum HOM05D005897 ORTHO05D007128 3.4e-119 431.8 234 100.0
Nitab4.5_0008755g0010 Nicotiana tabacum HOM05D005897 ORTHO05D007128 4.8e-81 305.1 196 80.1
Peaxi162Scf00191g00103 Petunia axillaris HOM05D005897 ORTHO05D007128 1.1e-48 197.6 206 60.2
Nitab4.5_0001092g0030 Nicotiana tabacum HOM05D005897 ORTHO05D007128 1.2e-39 167.5 225 46.2
Nitab4.5_0000400g0090 Nicotiana tabacum HOM05D005897 ORTHO05D007128 3.7e-33 146.0 226 40.3
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 4.5e-31 139.0 189 45.0
Gohir.D05G036900 Gossypium hirsutum HOM05D005897 ORTHO05D007128 2.7e-28 129.8 190 41.1
SalBow6G0024 Salvia bowleyana HOM05D005897 ORTHO05D007128 3.6e-28 129.4 210 41.4
Gorai.009G037400 Gossypium raimondii HOM05D005897 ORTHO05D007128 6.1e-28 128.6 190 41.1
Gohir.A05G035400 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.0e-27 126.3 195 41.0
COL.COLO4_21221 Corchorus olitorius HOM05D005897 ORTHO05D007128 5.2e-27 125.6 208 38.9
Duzib150G1683 Durio zibethinus HOM05D005897 ORTHO05D007128 5.2e-27 125.6 205 39.0
Gohir.A06G079100 Gossypium hirsutum HOM05D005897 ORTHO05D007128 5.2e-27 125.6 201 40.8
Dinv42424 Davidia involucrata HOM05D005897 ORTHO05D007128 6.7e-27 125.2 187 42.8
Gohir.D06G078500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 3.3e-26 122.9 201 38.8
Haze_26054 Corylus avellana HOM05D005897 ORTHO05D007128 5.7e-26 122.1 189 41.8
Gorai.010G091500 Gossypium raimondii HOM05D005897 ORTHO05D007128 5.7e-26 122.1 195 40.5
Duzib168G1262 Durio zibethinus HOM05D005897 ORTHO05D007128 7.5e-26 121.7 200 38.0
Cfa002951 Carpinus fangiana HOM05D005897 ORTHO05D007128 1.3e-25 120.9 204 40.2
Thecc.09G071600 Theobroma cacao HOM05D005897 ORTHO05D007128 1.3e-25 120.9 195 37.4
BcaB05g22814 Brassica carinata HOM05D005897 ORTHO05D007128 3.7e-25 119.4 187 41.7
CSS0017580 Camellia sinensis var. sinensis HOM05D005897 ORTHO05D007128 4.8e-25 119.0 189 42.9
Sp6g23730 Schrenkiella parvula HOM05D005897 ORTHO05D007128 4.8e-25 119.0 192 40.6
Oeu055332.1 Olea europaea HOM05D005897 ORTHO05D007128 1.4e-24 117.5 194 36.6
Thhalv10014753m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 4.1e-24 115.9 187 41.7
Actinidia39626 Actinidia chinensis HOM05D005897 ORTHO05D007128 5.3e-24 115.5 181 44.2
Lj6g0011186 Lotus japonicus HOM05D005897 ORTHO05D007128 7.0e-24 115.2 206 36.4
Sabra06G0107900 Salix brachista HOM05D005897 ORTHO05D007128 9.1e-24 114.8 187 36.4
Glyma.15G181800 Glycine max HOM05D005897 ORTHO05D007128 1.6e-23 114.0 182 35.2
AL5G21230 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 2.7e-23 113.2 181 39.8
BcaB08g36527 Brassica carinata HOM05D005897 ORTHO05D007128 5.9e-23 112.1 186 39.8
TPR.G4016 Trifolium pratense HOM05D005897 ORTHO05D007128 5.9e-23 112.1 188 35.6
MSTRG.19434 Avicennia marina HOM05D005897 ORTHO05D007128 7.7e-23 111.7 191 40.3
RcHm_v2.0_Chr2g0095761 Rosa chinensis HOM05D005897 ORTHO05D007128 7.7e-23 111.7 196 38.3
Aa31LG4G13050 Aethionema arabicum HOM05D005897 ORTHO05D007128 1.0e-22 111.3 182 40.1
Carub.0006s1909 Capsella rubella HOM05D005897 ORTHO05D007128 1.0e-22 111.3 200 38.0
Oeu055333.1 Olea europaea HOM05D005897 ORTHO05D007128 1.0e-22 111.3 194 39.2
CiPaw.03G202200 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.3e-22 110.9 195 40.0
AL6G32310 Arabidopsis lyrata HOM05D005897 ORTHO05D007128 3.8e-22 109.4 212 37.3
AT3G43110 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 3.8e-22 109.4 181 38.7
A10p19270 Brassica napus HOM05D005897 ORTHO05D007128 3.8e-22 109.4 181 38.1
BraA10t44004Z Brassica rapa HOM05D005897 ORTHO05D007128 5.0e-22 109.0 181 38.1
Sp5g18750 Schrenkiella parvula HOM05D005897 ORTHO05D007128 6.5e-22 108.6 177 38.4
PGR044G2287 Punica granatum HOM05D005897 ORTHO05D007128 8.5e-22 108.2 201 37.8
VMungo1309G2633 Vigna mungo HOM05D005897 ORTHO05D007128 8.5e-22 108.2 184 35.3
Gohir.D07G016500 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.1e-21 107.8 188 38.8
FAN26G0251 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.5e-21 107.5 202 37.1
TWI34G1248 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 1.5e-21 107.5 183 35.0
BcaC04g19466 Brassica carinata HOM05D005897 ORTHO05D007128 1.9e-21 107.1 183 38.8
Gorai.001G017300 Gossypium raimondii HOM05D005897 ORTHO05D007128 1.9e-21 107.1 188 38.8
QL11p002200 Quercus lobata HOM05D005897 ORTHO05D007128 1.9e-21 107.1 212 35.8
TWI32G0373 Tripterygium wilfordii HOM05D005897 ORTHO05D007128 1.9e-21 107.1 184 38.6
FAN28G0476 Fragaria x ananassa HOM05D005897 ORTHO05D007128 2.5e-21 106.7 196 38.8
A02p06480 Brassica napus HOM05D005897 ORTHO05D007128 3.2e-21 106.3 187 39.0
C03p11770 Brassica napus HOM05D005897 ORTHO05D007128 3.2e-21 106.3 194 40.7
BolC3t13648H Brassica oleracea HOM05D005897 ORTHO05D007128 3.2e-21 106.3 194 40.7
BraA02t05593Z Brassica rapa HOM05D005897 ORTHO05D007128 3.2e-21 106.3 187 39.0
BcaB01g04771 Brassica carinata HOM05D005897 ORTHO05D007128 4.2e-21 105.9 181 38.1
CARHR152530 Cardamine hirsuta HOM05D005897 ORTHO05D007128 4.2e-21 105.9 184 38.6
Migut.J00894 Erythranthe guttata HOM05D005897 ORTHO05D007128 4.2e-21 105.9 191 37.7
Phvul.009G224300 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 4.2e-21 105.9 181 35.4
BcaC03g13798 Brassica carinata HOM05D005897 ORTHO05D007128 5.5e-21 105.5 187 38.5
BolC2t07071H Brassica oleracea HOM05D005897 ORTHO05D007128 5.5e-21 105.5 187 38.5
FAN23G1701 Fragaria x ananassa HOM05D005897 ORTHO05D007128 5.5e-21 105.5 199 36.2
C09p55420 Brassica napus HOM05D005897 ORTHO05D007128 7.2e-21 105.1 183 38.3
BolC9t58404H Brassica oleracea HOM05D005897 ORTHO05D007128 7.2e-21 105.1 183 38.3
BraA03t10334Z Brassica rapa HOM05D005897 ORTHO05D007128 7.2e-21 105.1 190 38.4
Ciclev10009511m.g Citrus clementina HOM05D005897 ORTHO05D007128 7.2e-21 105.1 218 36.7
PGSC0003DMG400013552 Solanum tuberosum HOM05D005897 ORTHO05D007128 7.2e-21 105.1 178 45.5
SGA_v2.0_scaffold21G09544 Striga asiatica HOM05D005897 ORTHO05D007128 7.2e-21 105.1 202 39.1
Manes.16G091700 Manihot esculenta HOM05D005897 ORTHO05D007128 9.4e-21 104.8 195 35.4
A03p10250 Brassica napus HOM05D005897 ORTHO05D007128 1.2e-20 104.4 190 38.4
Ciclev10024151m.g Citrus clementina HOM05D005897 ORTHO05D007128 1.2e-20 104.4 197 39.6
Gohir.A07G016700 Gossypium hirsutum HOM05D005897 ORTHO05D007128 1.2e-20 104.4 188 38.3
AT5G20790 Arabidopsis thaliana HOM05D005897 ORTHO05D007128 1.6e-20 104.0 187 38.0
Cpa.g.sc1772.1 Carica papaya HOM05D005897 ORTHO05D007128 1.6e-20 104.0 182 35.2
FAN26G0677 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.6e-20 104.0 200 37.0
Glyma.09G073050 Glycine max HOM05D005897 ORTHO05D007128 1.6e-20 104.0 185 35.7
Medtr2g043710 Medicago truncatula HOM05D005897 ORTHO05D007128 1.6e-20 104.0 193 34.7
Psat1g137480 Pisum sativum HOM05D005897 ORTHO05D007128 1.6e-20 104.0 190 34.7
Glyma.13G113000 Glycine max HOM05D005897 ORTHO05D007128 8.0e-20 101.7 175 35.4
Carub.0005s0898 Capsella rubella HOM05D005897 ORTHO05D007128 1.0e-19 101.3 180 36.7
FvH4_1g09230 Fragaria vesca HOM05D005897 ORTHO05D007128 1.0e-19 101.3 196 35.2
FAN19G1802 Fragaria x ananassa HOM05D005897 ORTHO05D007128 1.0e-19 101.3 196 35.2
CiPaw.04G140700 Carya illinoinensis HOM05D005897 ORTHO05D007128 1.8e-19 100.5 205 35.6
MD15G1222300 Malus domestica HOM05D005897 ORTHO05D007128 2.3e-19 100.1 191 34.6
TAR624G1366 Trochodendron aralioides HOM05D005897 ORTHO05D007128 2.3e-19 100.1 200 35.5
Oeu010835.1 Olea europaea HOM05D005897 ORTHO05D007128 3.0e-19 99.8 200 37.0
Prupe.7G193600 Prunus persica HOM05D005897 ORTHO05D007128 3.0e-19 99.8 202 36.6
Thhalv10002680m.g Eutrema salsugineum HOM05D005897 ORTHO05D007128 8.8e-19 98.2 182 34.6
Atru.chr7.1754 Acer truncatum HOM05D005897 ORTHO05D007128 1.2e-18 97.8 202 41.6
Rhsim03G0226100 Rhododendron simsii HOM05D005897 ORTHO05D007128 2.0e-18 97.1 187 40.6
CANSAT56G4244 Cannabis sativa HOM05D005897 ORTHO05D007128 4.4e-18 95.9 195 34.9
Ca_05224_v3 Cicer arietinum L. HOM05D005897 ORTHO05D007128 4.4e-18 95.9 194 32.5
Manes.03G043500 Manihot esculenta HOM05D005897 ORTHO05D007128 5.7e-18 95.5 192 32.3
Rhsim05G0003600 Rhododendron simsii HOM05D005897 ORTHO05D007128 7.5e-18 95.1 183 39.3
TAR383G0419 Trochodendron aralioides HOM05D005897 ORTHO05D007128 7.5e-18 95.1 191 33.0
Migut.L01590 Erythranthe guttata HOM05D005897 ORTHO05D007128 1.7e-17 94.0 189 37.6
THA.LOC104799609 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 1.7e-17 94.0 202 38.6
VMungo1215G2819 Vigna mungo HOM05D005897 ORTHO05D007128 2.8e-17 93.2 180 33.3
CARHR192060 Cardamine hirsuta HOM05D005897 ORTHO05D007128 3.7e-17 92.8 189 38.1
Glyma.17G046700 Glycine max HOM05D005897 ORTHO05D007128 1.8e-16 90.5 186 31.7
arahy.Tifrunner.gnm1.ann1.K6A74J Arachis hypogaea HOM05D005897 ORTHO05D007128 2.4e-16 90.1 174 36.2
THA.LOC104811289 Tarenaya hassleriana HOM05D005897 ORTHO05D007128 2.4e-16 90.1 184 40.8
Lj4g0017959 Lotus japonicus HOM05D005897 ORTHO05D007128 3.1e-16 89.7 187 35.8
Phvul.003G128400 Phaseolus vulgaris HOM05D005897 ORTHO05D007128 5.4e-16 89.0 181 34.8
MD02G1099300 Malus domestica HOM05D005897 ORTHO05D007128 9.1e-16 88.2 193 33.2
Potri.006G137700 Populus trichocarpa HOM05D005897 ORTHO05D007128 1.6e-15 87.4 212 29.2
Lsat_1_v5_gn_5_139320 Lactuca sativa HOM05D005897 ORTHO05D007128 3.5e-15 86.3 205 33.7
Medtr4g124850 Medicago truncatula HOM05D005897 ORTHO05D007128 4.5e-15 85.9 194 33.5
Eucgr.C03289 Eucalyptus grandis HOM05D005897 ORTHO05D007128 1.3e-14 84.3 192 34.9
Nn8g38553 Nelumbo nucifera HOM05D005897 ORTHO05D007128 1.3e-14 84.3 216 28.2
PGR142G3671 Punica granatum HOM05D005897 ORTHO05D007128 3.8e-14 82.8 198 31.3
unitig_22.g5071 Utricularia gibba HOM05D005897 ORTHO05D007128 3.8e-14 82.8 182 34.1
Psat4g067280 Pisum sativum HOM05D005897 ORTHO05D007128 8.6e-14 81.6 188 36.2
AUR62028279 Chenopodium quinoa HOM05D005897 ORTHO05D007128 3.2e-13 79.7 197 32.0
TPR.G11456 Trifolium pratense HOM05D005897 ORTHO05D007128 2.3e-11 73.6 184 33.2
Actinidia29946 Actinidia chinensis HOM05D005897 ORTHO05D007128 3.0e-11 73.2 192 29.2
Nn6g35653 Nelumbo nucifera HOM05D005897 ORTHO05D007128 8.8e-11 71.6 205 26.8
Dinv25518 Davidia involucrata HOM05D005897 ORTHO05D007128 1.5e-10 70.9 90 43.3
Lalb_Chr11g0074041 Lupinus albus HOM05D005897 ORTHO05D007128 1.5e-10 70.9 180 32.2
Solyc07g042400.2 Solanum lycopersicum HOM05D000392 ORTHO05D007128 3.7e-09 66.2 114 43.9
Lalb_Chr23g0276271 Lupinus albus HOM05D005897 ORTHO05D007128 1.8e-08 63.9 187 34.8
vmacro15871 Vaccinium macrocarpon HOM05D000200 ORTHO05D000262 1.6e-07 60.8 51 56.9
Rhsim03G0226200 Rhododendron simsii HOM05D005897 ORTHO05D007128 2.7e-07 60.1 134 35.8
Actinidia38489 Actinidia chinensis HOM05D005897 ORTHO05D007128 5.0e-06 55.8 40 65.0


User provided reference genes

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