Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001699g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 2.9e-52 208.4 111 100.0
Nitab4.5_0007540g0040 Nicotiana tabacum HOM05D007531 ORTHO05D009484 1.5e-48 196.1 111 94.6
Sopen07g022090 Solanum pennellii HOM05D007531 ORTHO05D009484 1.6e-34 149.4 99 81.8
Solyc07g042450.3 Solanum lycopersicum HOM05D007531 ORTHO05D009484 4.6e-34 147.9 99 80.8
Nitab4.5_0001092g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 9.6e-32 140.2 98 74.5
PGSC0003DMG400013576 Solanum tuberosum HOM05D007531 ORTHO05D009484 2.1e-31 139.0 101 77.2
Peaxi162Scf00191g01018 Petunia axillaris HOM05D007531 ORTHO05D009484 1.1e-30 136.7 101 75.2
CAN.G660.22 Capsicum annuum HOM05D007531 ORTHO05D009484 4.0e-30 134.8 101 73.3
Dinv42427 Davidia involucrata HOM05D007531 ORTHO05D009484 1.3e-25 119.8 98 62.2
Oeu028116.1 Olea europaea HOM05D007531 ORTHO05D009484 1.1e-24 116.7 101 66.3
MSTRG.19432 Avicennia marina HOM05D007531 ORTHO05D009484 2.1e-23 112.5 104 68.3
CSS0023587 Camellia sinensis var. sinensis HOM05D007531 ORTHO05D009484 4.8e-23 111.3 98 62.2
Migut.L01591 Erythranthe guttata HOM05D007531 ORTHO05D009484 6.9e-22 107.5 108 58.3
Duzib168G1872 Durio zibethinus HOM05D007531 ORTHO05D009484 1.3e-20 103.2 98 59.2
SGA_v2.0_scaffold296G47570 Striga asiatica HOM05D007531 ORTHO05D009484 1.3e-20 103.2 109 55.0
SalBow6G4078 Salvia bowleyana HOM05D007531 ORTHO05D009484 2.2e-20 102.4 107 55.1
GSVIVG01015026001 Vitis vinifera HOM05D007531 ORTHO05D009484 3.8e-20 101.7 98 60.2
Dinv25515 Davidia involucrata HOM05D007531 ORTHO05D009484 4.9e-20 101.3 93 62.4
Thecc.09G071300 Theobroma cacao HOM05D007531 ORTHO05D009484 4.9e-20 101.3 99 58.6
MD15G1222700 Malus domestica HOM05D007531 ORTHO05D009484 8.4e-20 100.5 98 57.1
Prupe.7G193100 Prunus persica HOM05D007531 ORTHO05D009484 8.4e-20 100.5 101 55.4
CANSAT56G3767 Cannabis sativa HOM05D007531 ORTHO05D009484 1.1e-19 100.1 98 59.2
Sc14g0000480 Simmondsia chinensis HOM05D007531 ORTHO05D009484 3.2e-19 98.6 98 60.2
Actinidia39623 Actinidia chinensis HOM05D007531 ORTHO05D009484 5.5e-19 97.8 98 57.1
Duzib150G1567 Durio zibethinus HOM05D007531 ORTHO05D009484 2.1e-18 95.9 65 70.8
Cc06_g12620 Coffea canephora HOM05D007531 ORTHO05D009484 7.9e-18 94.0 110 52.7
Cpa.g.sc82.75 Carica papaya HOM05D007531 ORTHO05D009484 1.3e-17 93.2 102 56.9
Potri.006G137401 Populus trichocarpa HOM05D007531 ORTHO05D009484 1.3e-17 93.2 98 55.1
TWI63G1700 Tripterygium wilfordii HOM05D007531 ORTHO05D009484 1.3e-17 93.2 101 53.5
Manes.16G092000 Manihot esculenta HOM05D007531 ORTHO05D009484 2.3e-17 92.4 66 69.7
Gohir.D08G267900 Gossypium hirsutum HOM05D007531 ORTHO05D009484 3.0e-17 92.0 65 66.2
Gorai.004G285500 Gossypium raimondii HOM05D007531 ORTHO05D009484 3.0e-17 92.0 65 66.2
Manes.03G043400 Manihot esculenta HOM05D007531 ORTHO05D009484 3.0e-17 92.0 98 56.1
Hma1.2p1_0519F.1_g171380 Hydrangea macrophylla HOM05D007531 ORTHO05D009484 8.7e-17 90.5 103 54.4
THA.LOC104809045 Tarenaya hassleriana HOM05D007531 ORTHO05D009484 8.7e-17 90.5 100 53.0
ClCG11G000070 Citrullus lanatus HOM05D007531 ORTHO05D009484 1.1e-16 90.1 61 73.8
Atru.chr7.1757 Acer truncatum HOM05D007531 ORTHO05D009484 1.9e-16 89.4 60 71.7
COL.COLO4_21218 Corchorus olitorius HOM05D007531 ORTHO05D009484 1.9e-16 89.4 105 51.4
ECA246G1013 Erigeron canadensis HOM05D007531 ORTHO05D009484 1.9e-16 89.4 65 66.2
Rhsim05G0002900 Rhododendron simsii HOM05D007531 ORTHO05D009484 1.9e-16 89.4 100 51.0
Lsat_1_v5_gn_7_35440 Lactuca sativa HOM05D007531 ORTHO05D009484 2.5e-16 89.0 98 48.0
CsaV3_5G027570 Cucumis sativus L. HOM05D007531 ORTHO05D009484 4.3e-16 88.2 62 72.6
TAR626G0337 Trochodendron aralioides HOM05D007531 ORTHO05D009484 7.4e-16 87.4 98 51.0
Gohir.A08G246700 Gossypium hirsutum HOM05D007531 ORTHO05D009484 1.3e-15 86.7 101 51.5
unitig_578.g16405 Utricularia gibba HOM05D007531 ORTHO05D009484 1.3e-15 86.7 101 51.5
DCAR_010491 Daucus carota HOM05D007531 ORTHO05D009484 2.2e-15 85.9 98 50.0
RcHm_v2.0_Chr2g0095821 Rosa chinensis HOM05D007531 ORTHO05D009484 2.2e-15 85.9 104 48.1
FAN26G1659 Fragaria x ananassa HOM05D007531 ORTHO05D009484 2.8e-15 85.5 104 49.0
FAN26G1806 Fragaria x ananassa HOM05D007531 ORTHO05D009484 2.8e-15 85.5 104 49.0
PGR042G0735 Punica granatum HOM05D007531 ORTHO05D009484 2.8e-15 85.5 99 48.5
Aa31LG7G3950 Aethionema arabicum HOM05D007531 ORTHO05D009484 3.7e-15 85.1 100 51.0
CDE06G0851 Ceratophyllum demersum HOM05D007531 ORTHO05D009484 3.7e-15 85.1 87 58.6
AL1G31820 Arabidopsis lyrata HOM05D007531 ORTHO05D009484 6.3e-15 84.3 103 48.5
Carub.0001s1884 Capsella rubella HOM05D007531 ORTHO05D009484 6.3e-15 84.3 104 51.0
arahy.Tifrunner.gnm1.ann1.ETL5CI Arachis hypogaea HOM05D007531 ORTHO05D009484 1.4e-14 83.2 53 73.6
arahy.Tifrunner.gnm1.ann1.J82KAY Arachis hypogaea HOM05D007531 ORTHO05D009484 1.4e-14 83.2 53 73.6
BcaB07g31940 Brassica carinata HOM05D007531 ORTHO05D009484 1.4e-14 83.2 101 48.5
BcaC07g38992 Brassica carinata HOM05D007531 ORTHO05D009484 1.4e-14 83.2 101 48.5
Cfa002948 Carpinus fangiana HOM05D007531 ORTHO05D009484 2.4e-14 82.4 105 51.4
Sp1g17150 Schrenkiella parvula HOM05D007531 ORTHO05D009484 2.4e-14 82.4 100 48.0
EL10Ac8g18992 Beta vulgaris HOM05D007531 ORTHO05D009484 3.1e-14 82.0 98 51.0
Eucgr.H05011 Eucalyptus grandis HOM05D007531 ORTHO05D009484 5.3e-14 81.3 107 47.7
Lj4g0024105 Lotus japonicus HOM05D007531 ORTHO05D009484 5.3e-14 81.3 74 56.8
QL11p002692 Quercus lobata HOM05D007531 ORTHO05D009484 5.3e-14 81.3 101 52.5
FvH4_1g09260 Fragaria vesca HOM05D007531 ORTHO05D009484 6.9e-14 80.9 104 46.2
FAN19G1112 Fragaria x ananassa HOM05D007531 ORTHO05D009484 6.9e-14 80.9 104 46.2
vmacro17085 Vaccinium macrocarpon HOM05D007531 ORTHO05D009484 6.9e-14 80.9 44 81.8
TPR.G12718 Trifolium pratense HOM05D007531 ORTHO05D009484 9.0e-14 80.5 67 62.7
FAN23G0531 Fragaria x ananassa HOM05D007531 ORTHO05D009484 3.4e-13 78.6 95 45.3
Medtr4g124770 Medicago truncatula HOM05D007531 ORTHO05D009484 3.4e-13 78.6 73 57.5
AT1G19240 Arabidopsis thaliana HOM05D007531 ORTHO05D009484 4.5e-13 78.2 104 46.2
Thhalv10009175m.g Eutrema salsugineum HOM05D007531 ORTHO05D009484 4.5e-13 78.2 101 46.5
MBI19_g38003_MAGBIO Magnolia biondii HOM05D007531 ORTHO05D009484 7.6e-13 77.4 65 60.0
Phvul.004G046500 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 7.6e-13 77.4 80 51.2
Sabra06G0107500 Salix brachista HOM05D007531 ORTHO05D009484 7.6e-13 77.4 44 77.3
HPP92_021130 Vanilla planifolia HOM05D007531 ORTHO05D009484 7.6e-13 77.4 64 56.2
C05p17640 Brassica napus HOM05D007531 ORTHO05D009484 1.7e-12 76.3 58 65.5
BolC5t30467H Brassica oleracea HOM05D007531 ORTHO05D009484 1.7e-12 76.3 58 65.5
Ciclev10010006m.g Citrus clementina HOM05D007531 ORTHO05D009484 2.2e-12 75.9 101 46.5
HPP92_021129 Vanilla planifolia HOM05D007531 ORTHO05D009484 2.9e-12 75.5 98 42.9
A06p15390 Brassica napus HOM05D007531 ORTHO05D009484 3.8e-12 75.1 58 63.8
BraA06t24652Z Brassica rapa HOM05D007531 ORTHO05D009484 3.8e-12 75.1 58 63.8
CARHR019840 Cardamine hirsuta HOM05D007531 ORTHO05D009484 6.5e-12 74.3 110 45.5
Aqoxy7G04136 Aquilegia oxysepala HOM05D007531 ORTHO05D009484 8.5e-12 73.9 99 45.5
Psat0s2373g0160 Pisum sativum HOM05D007531 ORTHO05D009484 8.5e-12 73.9 63 60.3
Glyma.13G113300 Glycine max HOM05D007531 ORTHO05D009484 1.9e-11 72.8 48 72.9
Phvul.003G128000 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 2.5e-11 72.4 75 54.7
Glyma.17G046400 Glycine max HOM05D007531 ORTHO05D009484 1.6e-10 69.7 80 48.8
VMungo1215G2546 Vigna mungo HOM05D007531 ORTHO05D009484 1.6e-10 69.7 42 73.8
Os01g0144700 Oryza sativa ssp. japonica HOM05D007531 ORTHO05D009484 2.1e-10 69.3 82 46.3
Sed0019513 Sechium edule HOM05D007531 ORTHO05D009484 2.1e-10 69.3 62 58.1
Lalb_Chr11g0074031 Lupinus albus HOM05D007531 ORTHO05D009484 1.9e-08 62.8 101 39.6
FAN28G0689 Fragaria x ananassa HOM05D007531 ORTHO05D009484 4.3e-08 61.6 95 40.0


User provided reference genes

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