Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001695g0020 Nicotiana tabacum HOM05D005143 ORTHO05D006404 3.5e-158 561.6 294 100.0
Nitab4.5_0000169g0050 Nicotiana tabacum HOM05D005143 ORTHO05D006404 4.2e-151 538.1 294 96.3
PGSC0003DMG400014988 Solanum tuberosum HOM05D005143 ORTHO05D006404 4.4e-116 421.8 264 85.6
Sopen01g026590 Solanum pennellii HOM05D005143 ORTHO05D006404 4.8e-115 418.3 264 85.2
CAN.G1016.6 Capsicum annuum HOM05D005143 ORTHO05D006404 9.1e-114 414.1 265 84.5
Solyc01g060450.3 Solanum lycopersicum HOM05D005143 ORTHO05D006404 5.9e-113 411.4 264 84.1
Peaxi162Scf00065g00033 Petunia axillaris HOM05D005143 ORTHO05D006404 2.8e-102 375.9 266 78.6
Cc03_g01170 Coffea canephora HOM05D005143 ORTHO05D006404 7.5e-84 314.7 262 64.1
Lj6A685T16 Lonicera japonica HOM05D005143 ORTHO05D006404 1.2e-81 307.4 267 63.3
Dinv44320 Davidia involucrata HOM05D005143 ORTHO05D006404 2.1e-81 306.6 261 64.0
Dinv02072 Davidia involucrata HOM05D005143 ORTHO05D006404 1.7e-80 303.5 260 65.0
Actinidia40351 Actinidia chinensis HOM05D005143 ORTHO05D006404 5.6e-79 298.5 266 59.4
Actinidia15583 Actinidia chinensis HOM05D005143 ORTHO05D006404 9.5e-79 297.7 266 59.8
Hma1.2p1_0013F.1_g008930 Hydrangea macrophylla HOM05D005143 ORTHO05D006404 2.1e-78 296.6 260 60.4
GSVIVG01035046001 Vitis vinifera HOM05D005143 ORTHO05D006404 4.7e-78 295.4 261 60.9
CSS0004405 Camellia sinensis var. sinensis HOM05D005143 ORTHO05D006404 8.9e-77 291.2 264 60.6
vmacro08077 Vaccinium macrocarpon HOM05D005143 ORTHO05D006404 2.9e-75 286.2 273 59.0
Prupe.1G125800 Prunus persica HOM05D005143 ORTHO05D006404 3.8e-75 285.8 249 61.8
Manes.15G007000 Manihot esculenta HOM05D005143 ORTHO05D006404 8.4e-75 284.6 265 60.0
Ciclev10007083m.g Citrus clementina HOM05D005143 ORTHO05D006404 5.4e-74 282.0 265 59.2
Lj6g0005650 Lotus japonicus HOM05D005143 ORTHO05D006404 9.2e-74 281.2 260 59.2
Atru.chr4.2951 Acer truncatum HOM05D005143 ORTHO05D006404 1.2e-73 280.8 266 59.8
QL06p011304 Quercus lobata HOM05D005143 ORTHO05D006404 1.6e-73 280.4 265 58.1
MD13G1158800 Malus domestica HOM05D005143 ORTHO05D006404 6.0e-73 278.5 238 61.8
Nitab4.5_0000531g0070 Nicotiana tabacum HOM05D005143 ORTHO05D006404 6.0e-73 278.5 261 64.4
Nitab4.5_0008735g0010 Nicotiana tabacum HOM05D005143 ORTHO05D006404 1.0e-72 277.7 256 64.8
Thecc.04G294800 Theobroma cacao HOM05D005143 ORTHO05D006404 3.0e-72 276.2 260 59.6
Migut.N00060 Erythranthe guttata HOM05D005143 ORTHO05D006404 3.9e-72 275.8 266 59.8
MSTRG.21781 Avicennia marina HOM05D005143 ORTHO05D006404 2.5e-71 273.1 267 59.2
Lalb_Chr20g0121021 Lupinus albus HOM05D005143 ORTHO05D006404 2.5e-71 273.1 251 59.4
Cfa015478 Carpinus fangiana HOM05D005143 ORTHO05D006404 4.3e-71 272.3 267 58.1
Potri.010G140400 Populus trichocarpa HOM05D005143 ORTHO05D006404 4.3e-71 272.3 265 55.8
Lsat_1_v5_gn_6_115260 Lactuca sativa HOM05D005143 ORTHO05D006404 9.6e-71 271.2 266 58.3
arahy.Tifrunner.gnm1.ann1.UTG064 Arachis hypogaea HOM05D005143 ORTHO05D006404 1.2e-70 270.8 263 58.6
Phvul.009G253600 Phaseolus vulgaris HOM05D005143 ORTHO05D006404 1.2e-70 270.8 261 57.5
CiPaw.01G142400 Carya illinoinensis HOM05D005143 ORTHO05D006404 1.6e-70 270.4 239 59.4
Ca_01881_v3 Cicer arietinum L. HOM05D005143 ORTHO05D006404 1.6e-70 270.4 272 56.2
Ca_01895_v3 Cicer arietinum L. HOM05D005143 ORTHO05D006404 1.6e-70 270.4 272 56.2
ClCG05G006400 Citrullus lanatus HOM05D005143 ORTHO05D006404 1.6e-70 270.4 264 56.4
Glyma.09G039500 Glycine max HOM05D005143 ORTHO05D006404 1.6e-70 270.4 245 60.0
MD16G1159000 Malus domestica HOM05D005143 ORTHO05D006404 2.1e-70 270.0 235 60.4
TPR.G27704 Trifolium pratense HOM05D005143 ORTHO05D006404 2.1e-70 270.0 260 57.3
Haze_01089 Corylus avellana HOM05D005143 ORTHO05D006404 2.8e-70 269.6 269 56.9
Medtr2g034880 Medicago truncatula HOM05D005143 ORTHO05D006404 3.6e-70 269.2 262 58.0
PGR031G1222 Punica granatum HOM05D005143 ORTHO05D006404 4.7e-70 268.9 268 56.7
Duzib151G0017 Durio zibethinus HOM05D005143 ORTHO05D006404 6.2e-70 268.5 260 55.4
COL.COLO4_34676 Corchorus olitorius HOM05D005143 ORTHO05D006404 1.1e-69 267.7 244 58.2
VMungo1309G2864 Vigna mungo HOM05D005143 ORTHO05D006404 1.8e-69 266.9 261 57.1
Psat1g158200 Pisum sativum HOM05D005143 ORTHO05D006404 2.4e-69 266.5 262 57.6
CsaV3_3G015020 Cucumis sativus L. HOM05D005143 ORTHO05D006404 3.1e-69 266.2 266 56.0
Glyma.15G144700 Glycine max HOM05D005143 ORTHO05D006404 6.9e-69 265.0 245 59.2
Gohir.A10G168900 Gossypium hirsutum HOM05D005143 ORTHO05D006404 1.2e-68 264.2 240 57.9
Gohir.D10G175100 Gossypium hirsutum HOM05D005143 ORTHO05D006404 1.2e-68 264.2 240 57.9
FvH4_4g19280 Fragaria vesca HOM05D005143 ORTHO05D006404 1.5e-68 263.8 255 57.3
Sed0010751 Sechium edule HOM05D005143 ORTHO05D006404 1.5e-68 263.8 239 59.8
ECA246G2788 Erigeron canadensis HOM05D005143 ORTHO05D006404 2.6e-68 263.1 271 56.1
FAN12G3988 Fragaria x ananassa HOM05D005143 ORTHO05D006404 3.4e-68 262.7 255 57.3
Oeu016479.2 Olea europaea HOM05D005143 ORTHO05D006404 5.8e-68 261.9 235 63.0
RcHm_v2.0_Chr4g0424271 Rosa chinensis HOM05D005143 ORTHO05D006404 5.8e-68 261.9 256 57.0
Sabra10G0108500 Salix brachista HOM05D005143 ORTHO05D006404 5.8e-68 261.9 266 53.8
Aqoxy2G02819 Aquilegia oxysepala HOM05D005143 ORTHO05D006404 9.9e-68 261.2 226 60.6
DCAR_030483 Daucus carota HOM05D005143 ORTHO05D006404 1.3e-67 260.8 236 58.1
Gorai.011G195900 Gossypium raimondii HOM05D005143 ORTHO05D006404 2.2e-67 260.0 247 56.7
PSO761G0512 Papaver somniferum HOM05D005143 ORTHO05D006404 2.2e-67 260.0 250 57.2
TWI09G1317 Tripterygium wilfordii HOM05D005143 ORTHO05D006404 2.2e-67 260.0 243 56.4
MELO3C006698.2 Cucumis melo HOM05D005143 ORTHO05D006404 2.9e-67 259.6 242 57.9
PSO210G3751 Papaver somniferum HOM05D005143 ORTHO05D006404 2.9e-67 259.6 247 57.1
SalBow5G4838 Salvia bowleyana HOM05D005143 ORTHO05D006404 3.8e-67 259.2 257 56.0
Sabra08G0082500 Salix brachista HOM05D005143 ORTHO05D006404 4.9e-67 258.8 246 57.3
Glyma.17G031200 Glycine max HOM05D005143 ORTHO05D006404 6.4e-67 258.5 241 59.3
CiPaw.02G077100 Carya illinoinensis HOM05D005143 ORTHO05D006404 8.4e-67 258.1 240 58.3
EL10Ac3g04926 Beta vulgaris HOM05D005143 ORTHO05D006404 1.1e-66 257.7 230 59.1
DCAR_002501 Daucus carota HOM05D005143 ORTHO05D006404 1.4e-66 257.3 257 56.0
TAR362G0369 Trochodendron aralioides HOM05D005143 ORTHO05D006404 1.4e-66 257.3 237 57.4
Phvul.003G110600 Phaseolus vulgaris HOM05D005143 ORTHO05D006404 7.1e-66 255.0 266 56.4
Lalb_Chr18g0058921 Lupinus albus HOM05D005143 ORTHO05D006404 1.2e-65 254.2 253 57.3
Cpa.g.sc9.99 Carica papaya HOM05D005143 ORTHO05D006404 3.9e-64 249.2 240 56.7
Ah.04g154920 Amaranthus hybridus HOM05D005143 ORTHO05D006404 1.1e-63 247.7 231 57.6
VMungo1215G3234 Vigna mungo HOM05D005143 ORTHO05D006404 1.1e-63 247.7 238 58.8
Potri.008G108900 Populus trichocarpa HOM05D005143 ORTHO05D006404 1.9e-63 246.9 238 55.5
Potri.T170901 Populus trichocarpa HOM05D005143 ORTHO05D006404 1.9e-63 246.9 238 55.5
Eucgr.A00195 Eucalyptus grandis HOM05D005143 ORTHO05D006404 4.3e-63 245.7 270 53.7
AUR62035066 Chenopodium quinoa HOM05D005143 ORTHO05D006404 5.6e-63 245.4 257 54.5
Duzib052G1152 Durio zibethinus HOM05D005143 ORTHO05D006404 9.6e-63 244.6 240 54.2
SGA_v2.0_scaffold119G32680 Striga asiatica HOM05D005143 ORTHO05D006404 1.6e-62 243.8 225 58.2
Sc25g0003440 Simmondsia chinensis HOM05D005143 ORTHO05D006404 6.2e-62 241.9 232 56.5
Sp2g19670 Schrenkiella parvula HOM05D005143 ORTHO05D006404 1.4e-61 240.7 261 52.9
CANSAT78G1129 Cannabis sativa HOM05D005143 ORTHO05D006404 3.1e-61 239.6 256 54.7
THA.LOC104818896 Tarenaya hassleriana HOM05D005143 ORTHO05D006404 3.1e-61 239.6 261 49.8
Thhalv10005363m.g Eutrema salsugineum HOM05D005143 ORTHO05D006404 6.9e-61 238.4 257 52.5
BcaB07g34148 Brassica carinata HOM05D005143 ORTHO05D006404 2.6e-60 236.5 251 53.4
A02p38010 Brassica napus HOM05D005143 ORTHO05D006404 2.6e-60 236.5 251 53.4
BraA02t08785Z Brassica rapa HOM05D005143 ORTHO05D006404 2.6e-60 236.5 251 53.4
BcaC03g17714 Brassica carinata HOM05D005143 ORTHO05D006404 3.4e-60 236.1 261 52.5
BolC2t11792H Brassica oleracea HOM05D005143 ORTHO05D006404 3.4e-60 236.1 261 52.5
C02p57210 Brassica napus HOM05D005143 ORTHO05D006404 9.9e-60 234.6 261 52.1
CARHR182240 Cardamine hirsuta HOM05D005143 ORTHO05D006404 1.3e-59 234.2 251 54.2
Hund02954 Selenicereus undatus HOM05D005143 ORTHO05D006404 1.3e-59 234.2 275 49.1
AL8G22960 Arabidopsis lyrata HOM05D005143 ORTHO05D006404 1.7e-59 233.8 250 52.4
FAN07G0192 Fragaria x ananassa HOM05D005143 ORTHO05D006404 1.7e-59 233.8 202 63.4
Carub.0008s0919 Capsella rubella HOM05D005143 ORTHO05D006404 2.9e-59 233.0 239 53.1
Medtr2g034890 Medicago truncatula HOM05D005143 ORTHO05D006404 4.9e-59 232.3 238 56.3
Aa31LG11G7840 Aethionema arabicum HOM05D005143 ORTHO05D006404 8.4e-59 231.5 261 52.1
BolC7t44512H Brassica oleracea HOM05D005143 ORTHO05D006404 1.4e-58 230.7 251 53.0
HanXRQChr03g0093441 Helianthus annuus HOM05D005143 ORTHO05D006404 1.9e-58 230.3 261 51.3
BcaNung02596 Brassica carinata HOM05D005143 ORTHO05D006404 4.2e-58 229.2 251 53.0
C07p39840 Brassica napus HOM05D005143 ORTHO05D006404 4.2e-58 229.2 251 53.0
AT5G49320 Arabidopsis thaliana HOM05D005143 ORTHO05D006404 5.4e-58 228.8 261 50.6
Nn3g21616 Nelumbo nucifera HOM05D005143 ORTHO05D006404 6.0e-57 225.3 251 54.2
TPR.G27702 Trifolium pratense HOM05D005143 ORTHO05D006404 1.3e-54 217.6 258 51.9
Rhsim04G0232200 Rhododendron simsii HOM05D005143 ORTHO05D006404 1.4e-53 214.2 262 50.8
arahy.Tifrunner.gnm1.ann1.RF9CFS Arachis hypogaea HOM05D005143 ORTHO05D006404 2.0e-52 210.3 213 58.2
arahy.Tifrunner.gnm1.ann1.PXPP98 Arachis hypogaea HOM05D005143 ORTHO05D006404 3.4e-52 209.5 202 55.4
arahy.Tifrunner.gnm1.ann1.W9GTE1 Arachis hypogaea HOM05D005143 ORTHO05D006404 4.9e-51 205.7 213 56.8
MBI19_g29991_MAGBIO Magnolia biondii HOM05D005143 ORTHO05D006404 1.1e-50 204.5 253 47.4
Sabra08G0082600 Salix brachista HOM05D005143 ORTHO05D006404 1.1e-50 204.5 227 51.1
Lalb_Chr12g0200981 Lupinus albus HOM05D005143 ORTHO05D006404 1.2e-49 201.1 224 52.2
SGA_v2.0_scaffold91G28048 Striga asiatica HOM05D005143 ORTHO05D006404 6.2e-46 188.7 255 46.7
Nitab4.5_0005463g0090 Nicotiana tabacum HOM05D005143 ORTHO05D006404 3.1e-45 186.4 155 71.6
FAN12G2949 Fragaria x ananassa HOM05D005143 ORTHO05D006404 1.2e-44 184.5 193 52.8
CDE11G0634 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 6.5e-43 178.7 232 46.6
TAR633G2465 Trochodendron aralioides HOM05D005143 ORTHO05D006404 5.1e-40 169.1 157 53.5
Oeu006437.1 Olea europaea HOM05D005143 ORTHO05D006404 9.0e-37 158.3 134 64.2
Carub.0008s0727 Capsella rubella HOM05D005143 ORTHO05D006404 1.2e-36 157.9 239 42.7
HPP92_001064 Vanilla planifolia HOM05D005143 ORTHO05D006404 2.6e-36 156.8 225 43.6
AUR62043573 Chenopodium quinoa HOM05D005143 ORTHO05D006404 2.5e-34 150.2 135 56.3
SEGI_36016 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 7.2e-34 148.7 229 36.7
SEGI_27691 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 1.3e-32 144.4 226 38.1
AUR62016151 Chenopodium quinoa HOM05D005143 ORTHO05D006404 1.8e-32 144.1 165 52.7
CDE05G0725 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 1.1e-31 141.4 175 48.0
SEGI_03781 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 1.1e-29 134.8 226 35.8
Hund11951 Selenicereus undatus HOM05D005143 ORTHO05D006404 4.1e-29 132.9 140 51.4
Zm00001eb127640 Zea mays HOM05D005143 ORTHO05D006404 2.6e-28 130.2 209 37.8
AagrBONN_evm.TU.Sc2ySwM_368.1032 Anthoceros agrestis HOM05D005143 ORTHO05D006404 9.4e-26 121.7 265 35.8
ATR0706G251 Amborella trichopoda HOM05D005143 ORTHO05D006404 1.4e-24 117.9 232 35.8
Os01g0253400 Oryza sativa ssp. japonica HOM05D005143 ORTHO05D006404 5.1e-24 115.9 216 36.1
Lj3C827T17 Lonicera japonica HOM05D005143 ORTHO05D006404 1.3e-14 84.7 76 52.6
A06p38430 Brassica napus HOM05D005143 ORTHO05D006404 3.6e-09 66.6 89 48.3
BraA06t26757Z Brassica rapa HOM05D005143 ORTHO05D006404 3.6e-09 66.6 89 48.3
MBI09_g03808_MAGBIO Magnolia biondii HOM05D005143 ORTHO05D000022 4.7e-09 66.2 86 39.5
arahy.Tifrunner.gnm1.ann1.T63ME6 Arachis hypogaea HOM05D005143 ORTHO05D006404 2.0e-07 60.8 73 53.4
CDE05G1990 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 2.8e-06 57.0 181 28.2


User provided reference genes

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