Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001671g0020 Nicotiana tabacum HOM05D004876 ORTHO05D005488 1.1e-28 129.4 69 100.0
Nitab4.5_0006356g0050 Nicotiana tabacum HOM05D004876 ORTHO05D005488 9.6e-22 106.3 63 88.9
Nitab4.5_0000171g0270 Nicotiana tabacum HOM05D004876 ORTHO05D005488 1.1e-20 102.8 64 87.5
Peaxi162Scf00073g02225 Petunia axillaris HOM05D004876 ORTHO05D005488 2.6e-19 98.2 63 82.5
CAN.G1229.8 Capsicum annuum HOM05D004876 ORTHO05D005488 1.3e-18 95.9 60 81.7
Peaxi162Scf00167g01129 Petunia axillaris HOM05D004876 ORTHO05D005488 1.7e-15 85.5 63 74.6
PGSC0003DMG400011645 Solanum tuberosum HOM05D004876 ORTHO05D005488 1.3e-13 79.3 68 72.1
Sopen05g030710 Solanum pennellii HOM05D004876 ORTHO05D005488 3.6e-13 77.8 65 67.7
Nitab4.5_0008902g0030 Nicotiana tabacum HOM05D004876 ORTHO05D005488 1.5e-11 72.4 41 92.7
Solyc05g052180.3 Solanum lycopersicum HOM05D004876 ORTHO05D005488 1.5e-11 72.4 60 68.3
Cc02_g05210 Coffea canephora HOM05D004876 ORTHO05D005488 2.6e-11 71.6 62 58.1
Oeu006067.1 Olea europaea HOM05D004876 ORTHO05D005488 9.3e-09 63.2 62 53.2
QL08p065087 Quercus lobata HOM05D004876 ORTHO05D005488 3.5e-08 61.2 65 55.4
Migut.F01232 Erythranthe guttata HOM05D004876 ORTHO05D005488 4.6e-08 60.8 67 52.2
MSTRG.8381 Avicennia marina HOM05D004876 ORTHO05D005488 7.9e-08 60.1 63 54.0
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 1.8e-07 58.9 61 55.7
Prupe.2G265600 Prunus persica HOM05D004876 ORTHO05D005488 2.3e-07 58.5 65 55.4
Potri.019G061200 Populus trichocarpa HOM05D004876 ORTHO05D005488 5.1e-07 57.4 67 55.2
Manes.10G044800 Manihot esculenta HOM05D004876 ORTHO05D005488 1.5e-06 55.8 65 50.8
Haze_17370 Corylus avellana HOM05D004876 ORTHO05D005488 2.5e-06 55.1 66 53.0
Migut.A00831 Erythranthe guttata HOM05D004876 ORTHO05D005488 3.3e-06 54.7 63 49.2
FAN17G0734 Fragaria x ananassa HOM05D004876 ORTHO05D005488 4.3e-06 54.3 67 53.7
Phvul.005G185900 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 5.6e-06 53.9 67 47.8
THA.LOC104808402 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 5.6e-06 53.9 68 50.0
THA.LOC104824370 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 5.6e-06 53.9 68 50.0
Phvul.009G042700 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 7.4e-06 53.5 67 47.8
MD01G1169400 Malus domestica HOM05D004876 ORTHO05D005488 9.6e-06 53.1 62 50.0


User provided reference genes

Program Settings