Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 2.2e-97 359.0 187 100.0
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 7.9e-71 270.8 187 75.4
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 7.9e-71 270.8 187 75.4
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 3.0e-70 268.9 187 75.4
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 3.6e-63 245.4 193 72.5
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 1.6e-42 176.8 118 72.0
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 4.5e-42 175.3 118 72.0
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 4.5e-42 175.3 119 70.6
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 1.3e-41 173.7 113 73.5
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 2.3e-41 172.9 197 51.8
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 3.8e-41 172.2 109 78.0
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 3.8e-41 172.2 118 70.3
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 9.5e-40 167.5 183 50.3
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 9.5e-40 167.5 178 52.2
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 1.2e-39 167.2 113 69.0
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 1.6e-39 166.8 119 64.7
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 2.1e-39 166.4 174 52.3
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 2.1e-39 166.4 109 72.5
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 4.7e-39 165.2 135 65.2
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 4.7e-39 165.2 109 71.6
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 6.1e-39 164.9 188 50.5
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 8.0e-39 164.5 199 50.3
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 8.0e-39 164.5 176 50.6
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 1.0e-38 164.1 110 70.9
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 1.4e-38 163.7 121 64.5
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 1.8e-38 163.3 152 56.6
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 2.3e-38 162.9 135 63.7
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 3.0e-38 162.5 126 65.9
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 3.0e-38 162.5 126 65.9
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 3.0e-38 162.5 109 72.5
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 5.2e-38 161.8 109 73.4
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 6.8e-38 161.4 109 71.6
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 6.8e-38 161.4 172 52.3
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 8.9e-38 161.0 192 49.0
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 8.9e-38 161.0 135 63.7
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 8.9e-38 161.0 172 51.2
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 8.9e-38 161.0 115 68.7
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 1.2e-37 160.6 135 63.0
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 1.5e-37 160.2 126 64.3
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 1.5e-37 160.2 109 70.6
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.5e-37 160.2 109 72.5
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 2.0e-37 159.8 126 65.1
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 2.0e-37 159.8 177 57.6
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 2.6e-37 159.5 148 56.1
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 3.4e-37 159.1 98 80.6
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 5.7e-37 158.3 108 66.7
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 1.3e-36 157.1 109 70.6
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.7e-36 156.8 109 68.8
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 1.7e-36 156.8 148 56.1
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 2.2e-36 156.4 137 61.3
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 2.9e-36 156.0 182 50.5
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 3.7e-36 155.6 109 67.0
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 4.9e-36 155.2 130 56.9
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 4.9e-36 155.2 128 62.5
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 4.9e-36 155.2 109 71.6
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 4.9e-36 155.2 109 71.6
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 4.9e-36 155.2 109 71.6
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 6.4e-36 154.8 131 58.8
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 8.3e-36 154.5 175 52.0
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.1e-35 154.1 197 47.7
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.1e-35 154.1 197 47.7
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 1.1e-35 154.1 112 66.1
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 2.4e-35 152.9 144 56.9
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 2.4e-35 152.9 130 60.8
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 5.4e-35 151.8 134 56.7
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 5.4e-35 151.8 134 56.7
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 1.2e-34 150.6 189 46.6
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 1.2e-34 150.6 175 49.1
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 1.6e-34 150.2 188 44.1
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 2.0e-34 149.8 101 69.3
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 4.6e-34 148.7 205 48.3
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 5.9e-34 148.3 167 50.3
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 7.8e-34 147.9 98 70.4
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 7.8e-34 147.9 107 64.5
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 1.3e-33 147.1 119 61.3
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 1.3e-33 147.1 127 57.5
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.3e-33 147.1 143 50.3
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 3.0e-33 146.0 95 70.5
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 3.9e-33 145.6 110 61.8
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 5.0e-33 145.2 111 63.1
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 5.0e-33 145.2 161 49.7
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 8.6e-33 144.4 95 71.6
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 1.1e-32 144.1 109 62.4
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.1e-32 144.1 161 49.7
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 1.5e-32 143.7 118 54.2
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 1.9e-32 143.3 145 51.0
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 9.5e-32 141.0 129 58.9
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.8e-30 136.7 96 72.9
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 7.0e-27 124.8 83 73.5
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 7.0e-27 124.8 136 49.3
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 1.2e-26 124.0 102 58.8
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 4.6e-26 122.1 102 57.8
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 7.8e-26 121.3 102 62.7
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 3.9e-25 119.0 164 44.5
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 1.9e-24 116.7 87 65.5
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 3.3e-24 115.9 92 65.2
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 8.1e-23 111.3 130 41.5
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 9.8e-21 104.4 86 50.0
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 4.9e-20 102.1 145 43.4
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 8.3e-20 101.3 76 59.2
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 2.7e-18 96.3 108 44.4
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 1.3e-17 94.0 62 71.0
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-17 93.6 90 48.9
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 2.5e-16 89.7 128 43.8
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 6.0e-10 68.6 44 75.0
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 1.5e-08 63.9 97 42.3
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.2e-07 60.8 111 39.6


User provided reference genes

Program Settings