Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001660g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 9.6e-62 240.0 119 100.0
Nitab4.5_0000540g0160 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.6e-27 125.6 109 59.6
Nitab4.5_0005859g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.4e-25 119.8 111 58.6
Nitab4.5_0002924g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 9.7e-22 107.1 117 48.7
Nitab4.5_0005413g0080 Nicotiana tabacum HOM05D008844 ORTHO05D000006 9.7e-22 107.1 79 60.8
Nitab4.5_0001158g0070 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.7e-21 105.1 65 72.3
Nitab4.5_0002249g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.4e-20 102.4 65 70.8
Nitab4.5_0001676g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.1e-20 102.1 101 53.5
Nitab4.5_0003601g0040 Nicotiana tabacum HOM05D008844 ORTHO05D000006 5.3e-20 101.3 100 51.0
Nitab4.5_0001569g0210 Nicotiana tabacum HOM05D008844 ORTHO05D000006 9.0e-20 100.5 117 45.3
Nitab4.5_0000541g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.2e-18 95.9 65 67.7
Nitab4.5_0001027g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 8.5e-18 94.0 100 48.0
Nitab4.5_0000575g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-17 93.2 102 51.0
Nitab4.5_0027927g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.5e-17 92.4 110 49.1
Nitab4.5_0002697g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 4.2e-17 91.7 83 62.7
Nitab4.5_0007986g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.2e-17 90.9 65 61.5
Nitab4.5_0000457g0450 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.1e-16 89.4 65 58.5
Nitab4.5_0000396g0200 Nicotiana tabacum HOM05D011951 ORTHO05D000006 2.7e-16 89.0 65 60.0
Nitab4.5_0011177g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.7e-16 89.0 116 39.7
Nitab4.5_0000031g0300 Nicotiana tabacum HOM05D008844 ORTHO05D000006 7.9e-16 87.4 120 43.3
Nitab4.5_0005100g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.4e-15 86.7 65 56.9
Nitab4.5_0007450g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.8e-15 86.3 65 56.9
Nitab4.5_0000712g0070 Nicotiana tabacum HOM05D026524 ORTHO05D000006 3.0e-15 85.5 90 48.9
Nitab4.5_0002590g0020 Nicotiana tabacum HOM05D008844 ORTHO05D000006 3.0e-15 85.5 93 47.3
Nitab4.5_0000832g0100 Nicotiana tabacum HOM05D026524 ORTHO05D000006 3.9e-15 85.1 125 40.8
Nitab4.5_0000355g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-15 84.3 79 54.4
Nitab4.5_0001287g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-14 83.6 59 67.8
Nitab4.5_0000539g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.0e-14 82.8 57 63.2
Nitab4.5_0028335g0010 Nicotiana tabacum HOM05D045504 ORTHO05D000006 3.3e-14 82.0 114 39.5
Nitab4.5_0005065g0030 Nicotiana tabacum HOM05D008844 ORTHO05D000006 5.7e-14 81.3 46 73.9
Nitab4.5_0007582g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000006 5.7e-14 81.3 65 60.0
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.4e-14 80.9 116 41.4
Nitab4.5_0004728g0120 Nicotiana tabacum HOM05D008844 ORTHO05D000006 7.4e-14 80.9 54 64.8
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-13 80.1 56 62.5
Nitab4.5_0002004g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-13 78.6 55 63.6
Nitab4.5_0001790g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.2e-13 77.4 55 63.6
Nitab4.5_0001980g0120 Nicotiana tabacum HOM05D000024 ORTHO05D000006 8.2e-13 77.4 126 38.9
Nitab4.5_0007582g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 8.2e-13 77.4 58 58.6
Nitab4.5_0003605g0080 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.1e-12 77.0 56 58.9
Nitab4.5_0000082g0230 Nicotiana tabacum HOM05D011002 ORTHO05D000006 4.1e-12 75.1 61 55.7
Nitab4.5_0003810g0070 Nicotiana tabacum HOM05D011002 ORTHO05D022887 4.1e-12 75.1 56 60.7
Nitab4.5_0001123g0050 Nicotiana tabacum HOM05D011002 ORTHO05D000006 5.3e-12 74.7 103 42.7
Nitab4.5_0002223g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.3e-12 74.7 119 37.8
Nitab4.5_0002328g0050 Nicotiana tabacum HOM05D008844 ORTHO05D000006 5.3e-12 74.7 114 39.5
Nitab4.5_0004763g0010 Nicotiana tabacum HOM05D008844 ORTHO05D000006 6.9e-12 74.3 61 54.1
Nitab4.5_0000008g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-11 73.2 54 55.6
Nitab4.5_0002114g0100 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.6e-11 72.4 116 36.2
Nitab4.5_0000527g0060 Nicotiana tabacum HOM05D008844 ORTHO05D000006 5.9e-11 71.2 54 59.3
Nitab4.5_0000372g0090 Nicotiana tabacum HOM05D014359 ORTHO05D000007 7.7e-11 70.9 56 50.0
Nitab4.5_0000491g0040 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.0e-10 70.5 54 59.3
Nitab4.5_0000244g0250 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.2e-10 69.3 50 60.0
Nitab4.5_0000914g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.2e-10 69.3 65 49.2
Nitab4.5_0002737g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.2e-10 69.3 52 59.6
Nitab4.5_0000431g0190 Nicotiana tabacum HOM05D012387 ORTHO05D000006 2.9e-10 68.9 65 49.2
Nitab4.5_0001107g0070 Nicotiana tabacum HOM05D011002 ORTHO05D000006 5.0e-10 68.2 81 38.3
Nitab4.5_0007963g0090 Nicotiana tabacum HOM05D008844 ORTHO05D000006 6.5e-10 67.8 65 52.3
Nitab4.5_0003397g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.1e-09 67.0 76 44.7
Nitab4.5_0000013g0590 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.9e-09 66.2 100 38.0
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-09 66.2 105 38.1
SHI14849 Sapria himalayana HOM05D000024 ORTHO05D000006 2.5e-09 65.9 64 42.2
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-09 65.5 94 41.5
Nitab4.5_0002108g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.2e-09 65.5 56 55.4
Nitab4.5_0002591g0070 Nicotiana tabacum HOM05D011002 ORTHO05D000006 3.2e-09 65.5 55 47.3
Peaxi162Scf01188g00002 Petunia axillaris HOM05D008844 ORTHO05D000006 4.2e-09 65.1 66 51.5
PGSC0003DMG400011858 Solanum tuberosum HOM05D000024 ORTHO05D000006 5.5e-09 64.7 64 40.6
Nitab4.5_0006768g0010 Nicotiana tabacum HOM05D000125 ORTHO05D013275 7.2e-09 64.3 42 66.7
SHI48200 Sapria himalayana HOM05D000024 ORTHO05D000006 7.2e-09 64.3 65 41.5
SHI28657 Sapria himalayana HOM05D000024 ORTHO05D000006 9.4e-09 63.9 65 41.5
SHI21937 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-08 63.5 65 41.5
SHI36499 Sapria himalayana HOM05D000024 ORTHO05D000006 1.2e-08 63.5 65 41.5
Nitab4.5_0000370g0070 Nicotiana tabacum HOM05D012219 ORTHO05D000006 1.6e-08 63.2 103 39.8
Nitab4.5_0000715g0130 Nicotiana tabacum HOM05D008844 ORTHO05D000006 1.6e-08 63.2 44 70.5
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-08 63.2 80 37.5
SHI35886 Sapria himalayana HOM05D000024 ORTHO05D000006 1.6e-08 63.2 65 41.5
SHI46723 Sapria himalayana HOM05D000024 ORTHO05D000006 1.6e-08 63.2 65 40.0
Nitab4.5_0001987g0040 Nicotiana tabacum HOM05D011002 ORTHO05D000006 2.1e-08 62.8 97 43.3
SHI34714 Sapria himalayana HOM05D000024 ORTHO05D000006 2.1e-08 62.8 69 36.2
SHI35807 Sapria himalayana HOM05D000024 ORTHO05D000006 2.1e-08 62.8 69 34.8
SHI47252 Sapria himalayana HOM05D000024 ORTHO05D000006 2.7e-08 62.4 65 36.9
Nitab4.5_0000071g0300 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.6e-08 62.0 51 47.1
SHI08788 Sapria himalayana HOM05D000024 ORTHO05D000006 3.6e-08 62.0 76 40.8
SHI22798 Sapria himalayana HOM05D000024 ORTHO05D000006 3.6e-08 62.0 64 40.6
SHI24107 Sapria himalayana HOM05D000024 ORTHO05D000006 4.7e-08 61.6 65 41.5
SHI49286 Sapria himalayana HOM05D000024 ORTHO05D000007 6.1e-08 61.2 69 33.3
Nitab4.5_0003178g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000006 7.9e-08 60.8 56 50.0
Nitab4.5_0003940g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.9e-08 60.8 48 54.2
SHI34493 Sapria himalayana HOM05D000024 ORTHO05D000006 7.9e-08 60.8 65 41.5
SHI46359 Sapria himalayana HOM05D000024 ORTHO05D000006 7.9e-08 60.8 69 39.1
SHI15747 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-07 60.5 65 35.4
SHI39165 Sapria himalayana HOM05D000024 ORTHO05D000006 1.0e-07 60.5 61 37.7
Nitab4.5_0000837g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000006 1.4e-07 60.1 65 41.5
Nitab4.5_0004384g0010 Nicotiana tabacum HOM05D002327 ORTHO05D002306 1.4e-07 60.1 44 56.8
SHI25423 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-07 60.1 60 48.3
SHI46797 Sapria himalayana HOM05D000024 ORTHO05D000006 1.4e-07 60.1 71 33.8
Nitab4.5_0001360g0020 Nicotiana tabacum HOM05D023645 ORTHO05D000007 1.8e-07 59.7 38 63.2
SHI16624 Sapria himalayana HOM05D000024 ORTHO05D000006 1.8e-07 59.7 65 33.8
SHI45778 Sapria himalayana HOM05D000024 ORTHO05D000006 1.8e-07 59.7 65 40.0
SHI45781 Sapria himalayana HOM05D000024 ORTHO05D000006 1.8e-07 59.7 69 34.8
SHI49279 Sapria himalayana HOM05D000024 ORTHO05D000006 1.8e-07 59.7 65 40.0
Nitab4.5_0000234g0080 Nicotiana tabacum HOM05D008844 ORTHO05D000006 2.3e-07 59.3 54 57.4
SHI00512 Sapria himalayana HOM05D000024 ORTHO05D000006 2.3e-07 59.3 78 35.9
SHI15990 Sapria himalayana HOM05D000024 ORTHO05D000006 2.3e-07 59.3 65 33.8
SHI24128 Sapria himalayana HOM05D000024 ORTHO05D000006 2.3e-07 59.3 61 37.7
Nitab4.5_0006324g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 3.0e-07 58.9 44 56.8
SHI04746 Sapria himalayana HOM05D000024 ORTHO05D000006 3.0e-07 58.9 69 31.9
SHI29951 Sapria himalayana HOM05D000024 ORTHO05D000006 3.0e-07 58.9 69 31.9
SHI49513 Sapria himalayana HOM05D000024 ORTHO05D000006 3.0e-07 58.9 69 31.9
PGSC0003DMG402031434 Solanum tuberosum HOM05D000003 ORTHO05D000004 3.0e-07 58.9 61 41.0
Nitab4.5_0009832g0030 Nicotiana tabacum HOM05D023645 ORTHO05D000006 3.9e-07 58.5 33 78.8
SHI38431 Sapria himalayana HOM05D000024 ORTHO05D022887 3.9e-07 58.5 61 36.1
SHI49137 Sapria himalayana HOM05D000024 ORTHO05D000006 3.9e-07 58.5 65 32.3
SHI44986 Sapria himalayana HOM05D000024 ORTHO05D000006 5.1e-07 58.2 69 33.3
SHI30896 Sapria himalayana HOM05D000024 ORTHO05D000006 6.7e-07 57.8 64 32.8
Nitab4.5_0000149g0110 Nicotiana tabacum HOM05D008844 ORTHO05D000006 8.8e-07 57.4 49 57.1
SHI51450 Sapria himalayana HOM05D000024 ORTHO05D000006 8.8e-07 57.4 61 34.4
PGSC0003DMG400025586 Solanum tuberosum HOM05D000024 ORTHO05D000006 8.8e-07 57.4 121 37.2
Thecc.04G000100 Theobroma cacao HOM05D000024 ORTHO05D000006 1.1e-06 57.0 65 38.5
Nitab4.5_0003236g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-06 56.6 101 36.6
Nitab4.5_0005334g0060 Nicotiana tabacum HOM05D012219 ORTHO05D000006 1.5e-06 56.6 120 33.3
Peaxi162Scf00018g02312 Petunia axillaris HOM05D000024 ORTHO05D000006 1.5e-06 56.6 52 48.1
SHI25435 Sapria himalayana HOM05D000024 ORTHO05D000006 1.5e-06 56.6 60 41.7
Nitab4.5_0000270g0240 Nicotiana tabacum HOM05D008844 ORTHO05D283287 2.0e-06 56.2 34 76.5
Nitab4.5_0001251g0040 Nicotiana tabacum HOM05D024362 ORTHO05D000006 2.0e-06 56.2 69 42.0
Nitab4.5_0002487g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 2.0e-06 56.2 58 41.4
SHI01449 Sapria himalayana HOM05D000024 ORTHO05D000006 2.0e-06 56.2 65 38.5
SHI33697 Sapria himalayana HOM05D000024 ORTHO05D000006 2.0e-06 56.2 60 33.3
SHI46913 Sapria himalayana HOM05D000024 ORTHO05D000006 2.0e-06 56.2 65 36.9
Nitab4.5_0001046g0020 Nicotiana tabacum HOM05D034116 ORTHO05D000006 2.6e-06 55.8 34 70.6
SHI15854 Sapria himalayana HOM05D000024 ORTHO05D000006 2.6e-06 55.8 65 38.5
SHI53870 Sapria himalayana HOM05D000024 ORTHO05D000006 2.6e-06 55.8 61 36.1
Nitab4.5_0000261g0200 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.4e-06 55.1 65 35.4
Nitab4.5_0001007g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000006 4.4e-06 55.1 65 41.5
SHI34484 Sapria himalayana HOM05D000024 ORTHO05D000006 4.4e-06 55.1 69 31.9
SHI36683 Sapria himalayana HOM05D000024 ORTHO05D000006 4.4e-06 55.1 64 39.1
SHI15796 Sapria himalayana HOM05D000024 ORTHO05D000007 5.7e-06 54.7 57 40.4
SHI19795 Sapria himalayana HOM05D000024 ORTHO05D000006 5.7e-06 54.7 58 41.4
MBI10_g38059_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 7.4e-06 54.3 54 46.3
Nitab4.5_0002586g0100 Nicotiana tabacum HOM05D034116 ORTHO05D010811 7.4e-06 54.3 35 65.7
SHI30898 Sapria himalayana HOM05D000024 ORTHO05D000006 7.4e-06 54.3 69 31.9
SHI34352 Sapria himalayana HOM05D000024 ORTHO05D000006 7.4e-06 54.3 60 33.3
SHI35034 Sapria himalayana HOM05D000024 ORTHO05D000006 7.4e-06 54.3 65 35.4
SHI38873 Sapria himalayana HOM05D000024 ORTHO05D000006 7.4e-06 54.3 58 41.4
SHI42651 Sapria himalayana HOM05D000024 ORTHO05D000006 9.7e-06 53.9 58 37.9


User provided reference genes

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