Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 7.2e-33 143.3 70 100.0
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.8e-31 138.7 70 95.7
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 1.1e-30 136.0 70 95.7
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 1.5e-30 135.6 70 94.3
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 1.4e-28 129.0 70 90.0
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.4e-28 129.0 70 90.0
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 1.8e-28 128.6 70 90.0
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 1.4e-25 119.0 71 83.1
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 5.5e-25 117.1 69 82.6
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 9.4e-25 116.3 69 82.6
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 3.6e-24 114.4 68 82.4
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 3.6e-24 114.4 68 82.4
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 3.6e-24 114.4 68 82.4
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 6.1e-24 113.6 68 82.4
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 7.9e-24 113.2 68 80.9
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 1.4e-23 112.5 68 79.4
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 1.4e-23 112.5 68 79.4
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 1.8e-23 112.1 68 80.9
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 1.8e-23 112.1 68 80.9
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 3.0e-23 111.3 68 77.9
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 3.9e-23 110.9 66 83.3
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 3.9e-23 110.9 67 80.6
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 3.9e-23 110.9 68 77.9
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 3.9e-23 110.9 68 80.9
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 5.1e-23 110.5 68 80.9
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 5.1e-23 110.5 68 80.9
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 6.7e-23 110.2 66 83.3
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 6.7e-23 110.2 68 80.9
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 6.7e-23 110.2 66 81.8
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 6.7e-23 110.2 68 77.9
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 8.8e-23 109.8 68 77.9
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 8.8e-23 109.8 68 77.9
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 1.1e-22 109.4 68 76.5
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 1.5e-22 109.0 68 80.9
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 1.5e-22 109.0 68 79.4
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 2.6e-22 108.2 69 76.8
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 2.6e-22 108.2 68 76.5
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 2.6e-22 108.2 68 75.0
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 3.3e-22 107.8 65 80.0
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 3.3e-22 107.8 65 80.0
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 3.3e-22 107.8 66 78.8
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 3.3e-22 107.8 65 80.0
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 4.4e-22 107.5 68 79.4
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 9.7e-22 106.3 67 76.1
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.3e-21 105.9 68 76.5
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 1.3e-21 105.9 68 73.5
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 2.2e-21 105.1 69 75.4
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 2.2e-21 105.1 69 75.4
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 2.8e-21 104.8 68 79.4
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 2.8e-21 104.8 68 75.0
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 3.7e-21 104.4 68 75.0
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 3.7e-21 104.4 68 75.0
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 3.7e-21 104.4 63 81.0
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 3.7e-21 104.4 68 75.0
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 6.3e-21 103.6 69 73.9
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 6.3e-21 103.6 69 73.9
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 6.3e-21 103.6 69 73.9
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 6.3e-21 103.6 69 73.9
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 6.3e-21 103.6 69 73.9
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 8.2e-21 103.2 69 73.9
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.1e-20 102.8 63 79.4
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 1.1e-20 102.8 63 79.4
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.4e-20 102.4 64 76.6
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 1.8e-20 102.1 69 73.9
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 2.4e-20 101.7 69 72.5
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 2.4e-20 101.7 71 70.4
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 2.4e-20 101.7 68 72.1
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 3.1e-20 101.3 68 72.1
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 6.9e-20 100.1 62 80.6
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 1.2e-19 99.4 68 72.1
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 1.2e-19 99.4 69 72.5
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 1.5e-19 99.0 70 71.4
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 1.5e-19 99.0 60 83.3
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.5e-19 99.0 60 85.0
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 2.0e-19 98.6 68 69.1
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 2.6e-19 98.2 67 68.7
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 4.5e-19 97.4 68 69.1
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 5.9e-19 97.1 60 80.0
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 1.1e-17 92.8 69 68.1
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 3.2e-17 91.3 68 64.7
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 4.2e-17 90.9 55 81.8
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 5.5e-17 90.5 67 68.7
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 5.5e-17 90.5 69 63.8
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 7.2e-17 90.1 65 67.7
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 1.6e-16 89.0 65 66.2
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 2.1e-16 88.6 71 62.0
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 8.0e-16 86.7 65 66.2
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.4e-15 85.9 55 74.5
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 1.4e-15 85.9 66 63.6
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 1.8e-15 85.5 67 62.7
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 1.8e-15 85.5 53 77.4
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 3.9e-15 84.3 63 69.8
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 8.8e-15 83.2 66 62.1
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.5e-14 82.4 63 68.3
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 2.0e-14 82.0 55 72.7
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 7.4e-14 80.1 55 70.9
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 1.3e-13 79.3 64 60.9
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 1.3e-13 79.3 67 58.2
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 3.7e-13 77.8 66 60.6
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 5.9e-11 70.5 73 54.8
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 7.7e-11 70.1 59 57.6
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 2.9e-10 68.2 56 62.5
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 1.5e-09 65.9 40 70.0
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 2.3e-07 58.5 39 69.2
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 6.7e-07 57.0 41 73.2
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 2.6e-06 55.1 68 42.6
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 5.7e-06 53.9 36 63.9


User provided reference genes

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